RegulonDB RegulonDB 10.8: Gene Form
   

ybfK gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

speF kdpE ybfK speFL potE kdpD potEp1 potEp1

Gene      
Name: ybfK    Texpresso search in the literature
Synonym(s): ECK4400, G0-10586, b4590
Type: Phantom Gene
Genome position(nucleotides): 720583 --> 720840 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 44.19
Note(s): The ybfK gene has been deaccessioned due to experimental evidence for the SpeFL leader peptide (Herrero Del Valle A,2020) encoded on the opposite strand.
Former UniProt ID:P46121
External database links:  
PortEco:
 ybfK
STRING:
 511145.b4590
COLOMBOS: ybfK


Product      
Name: uncharacterized protein YbfK
Synonym(s): YbfK
Sequence: Get amino acid sequence Fasta Format
Molecular weight: 9.499
Isoelectric point: 5.486
Classification:
Multifun Terms (GenProtEC)  
Gene Ontology Terms (GO)  
External database links:  
ECOCYC:
 MONOMER0-2815
ECOLIWIKI:
 b4590
PRIDE:
 P46121
REFSEQ:
 YP_001165310
UNIPROT:
 P46121


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter potEp1 718344 reverse Similarity to the consensus
Read more > 		[ICWHO] [1]


Evidence    

 [ICWHO] Inferred computationally without human oversight


Reference(s)    

 [1] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78

RegulonDB