RegulonDB RegulonDB 10.7: Gene Form
   

yqcG gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

ygcG queE yqcG ygcGp6 ygcGp6 queEp7 queEp7 ygcGp7 ygcGp7

Gene      
Name: yqcG    Texpresso search in the literature
Synonym(s): ECK4497, G0-10655, b4682
Genome position(nucleotides): 2905557 --> 2905697 Genome Browser
Strand: forward
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
24.11
External database links:  
PORTECO:
yqcG
REGULONDB:
b4682
STRING:
511145.b4682
M3D: yqcG
COLOMBOS: yqcG
PortEco: yqcG


Product      
Name: cell envelope stress response protein YqcG
Synonym(s): YqcG, small protein involved in the cell envelope stress response
Sequence: Get amino acid sequence Fasta Format
Molecular weight: 5.383
Isoelectric point: 4.762
Classification:
Multifun Terms (GenProtEC)  
  5 - cell processes --> 5.5 - adaptations
Gene Ontology Terms (GO)  
biological_process GO:0036460 - cellular response to cell envelope stress
Note(s): Note(s): ...[more].
Evidence: [IMP] Inferred from mutant phenotype
Reference(s): [1] Hobbs EC., et al., 2010
External database links:  
ECOCYC:
MONOMER0-2882
PRIDE:
C1P612
REFSEQ:
YP_002791252
UNIPROT:
C1P612


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References
  promoter ygcGp7 2905605 forward Similarity to the consensus
Read more >
[ICWHO] [2]
  promoter queEp7 2905606 reverse Similarity to the consensus
Read more >
[ICWHO] [2]
  promoter ygcGp6 2905666 forward Similarity to the consensus
Read more >
[ICWHO] [2]


Evidence    

 [ICWHO] Inferred computationally without human oversight



Reference(s)    

 [1] Hobbs EC., Astarita JL., Storz G., 2010, Small RNAs and small proteins involved in resistance to cell envelope stress and acid shock in Escherichia coli: analysis of a bar-coded mutant collection., J Bacteriol 192(1):59-67

 [2] Huerta AM., Collado-Vides J., 2003, Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals., J Mol Biol 333(2):261-78


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