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YqhC Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
PDO 2,5-diketo-D-gluconate L-sorbosonate 3-hydroxypropanal DkgA YqhC YqhD acid acetaldehyde acetate acetol ROH RCHO ethyl-(2R)-methyl-(3S)-hydroxybutanoate ethyl-2-methylacetoacetate oxopropanal yqhD-dkgA yqhD-dkgA_mRNA


Gensor Unit       
Name: YqhC
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): biological_process GO:0051596 - methylglyoxal catabolic process
GO:0000302 - response to reactive oxygen species
cellular_component GO:0005829 - cytosol
molecular_function GO:0008106 - alcohol dehydrogenase (NADP+) activity
GO:0018455 - alcohol dehydrogenase [NAD(P)+] activity
GO:1990002 - methylglyoxal reductase (NADPH-dependent, acetol producing)
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0008270 - zinc ion binding
Components: Show/Hide Components Table (24 more...)
Function Name Type
simple_molecule 1,2-propanediol simple_molecule
simple_molecule 1,3,4-butanetriol simple_molecule
simple_molecule 1,3-propanediol simple_molecule
simple_molecule 2,5-diketo-D-gluconate simple_molecule
simple_molecule 3,4-dihydroxybutanal simple_molecule
simple_molecule 3-hydroxypropanal simple_molecule
protein DkgA protein
simple_molecule RCHO simple_molecule
protein YqhC protein
protein YqhD protein
simple_molecule acetate simple_molecule
simple_molecule acetol simple_molecule
simple_molecule alcohol simple_molecule
simple_molecule carboxylate simple_molecule
simple_molecule ethanal simple_molecule
simple_molecule ethyl-(2R)-methyl-(3S)-hydroxybutanoate simple_molecule
simple_molecule ethyl-2-methylacetoacetate simple_molecule
simple_molecule isobutanal simple_molecule
simple_molecule isobutanol simple_molecule
simple_molecule lactaldehyde simple_molecule
simple_molecule oxopropanal simple_molecule
simple_molecule sorbosonate simple_molecule
gene yqhD-dkgA gene
RNA yqhD-dkgA_mRNA RNA


Reactions       
Showing 13 reactions
YqhC yqhD-dkgA yqhD-dkgA_mRNA
Name: yqhD-dkgA -> yqhD-dkgA_mRNA
Description: Transcription of transcription unit yqhD-dkgA. Reaction activation by YqhC.
Type: transcription
Pathway Components: yqhD-dkgA - YqhC -> yqhD-dkgA_mRNA
Components:
Function Name Type Evidence Reference(s)
activator YqhC protein nd nd
reactant yqhD-dkgA gene nd nd
product yqhD-dkgA_mRNA RNA nd nd
yqhD-dkgA_mRNA YqhD
Name: yqhD-dkgA_mRNA -> YqhD
Description: Translation of YqhD
Type: translation
Pathway Components: yqhD-dkgA_mRNA -> YqhD
Components:
Function Name Type Evidence Reference(s)
product YqhD protein nd nd
reactant yqhD-dkgA_mRNA RNA nd nd
DkgA YqhD acetol oxopropanal
Name: acetol -> oxopropanal
Description: Reaction transforming acetol into oxopropanal
Type: state transition
Pathway Components: acetol - DkgA - YqhD -> oxopropanal
Components:
Function Name Type Evidence Reference(s)
catalyzer DkgA protein nd nd
catalyzer YqhD protein nd nd
reactant acetol simple_molecule nd nd
product oxopropanal simple_molecule nd nd
YqhD alcohol RCHO
Name: alcohol -> RCHO
Description: Reaction transforming alcohol into RCHO
Type: state transition
Pathway Components: alcohol - YqhD -> RCHO
Components:
Function Name Type Evidence Reference(s)
product RCHO simple_molecule nd nd
catalyzer YqhD protein nd nd
reactant alcohol simple_molecule nd nd
YqhD 1,2-propanediol lactaldehyde
Name: 1,2-propanediol -> lactaldehyde
Description: Reaction transforming 1,2-propanediol into lactaldehyde
Type: state transition
Pathway Components: 1,2-propanediol - YqhD -> lactaldehyde
Components:
Function Name Type Evidence Reference(s)
reactant 1,2-propanediol simple_molecule nd nd
catalyzer YqhD protein nd nd
product lactaldehyde simple_molecule nd nd
YqhD RCHO carboxylate
Name: RCHO -> carboxylate
Description: Reaction transforming RCHO into carboxylate
Type: state transition
Pathway Components: RCHO - YqhD -> carboxylate
Components:
Function Name Type Evidence Reference(s)
reactant RCHO simple_molecule nd nd
catalyzer YqhD protein nd nd
product carboxylate simple_molecule nd nd
YqhD ethanal acetate
Name: ethanal -> acetate
Description: Reaction transforming ethanal into acetate
Type: state transition
Pathway Components: ethanal - YqhD -> acetate
Components:
Function Name Type Evidence Reference(s)
catalyzer YqhD protein nd nd
product acetate simple_molecule nd nd
reactant ethanal simple_molecule nd nd
YqhD 1,3-propanediol 3-hydroxypropanal
Name: 1,3-propanediol -> 3-hydroxypropanal
Description: Reaction transforming 1,3-propanediol into 3-hydroxypropanal
Type: state transition
Pathway Components: 1,3-propanediol - YqhD -> 3-hydroxypropanal
Components:
Function Name Type Evidence Reference(s)
reactant 1,3-propanediol simple_molecule nd nd
product 3-hydroxypropanal simple_molecule nd nd
catalyzer YqhD protein nd nd
YqhD 3,4-dihydroxybutanal 1,3,4-butanetriol
Name: 3,4-dihydroxybutanal -> 1,3,4-butanetriol
Description: Reaction transforming 3,4-dihydroxybutanal into 1,3,4-butanetriol
Type: state transition
Pathway Components: 3,4-dihydroxybutanal - YqhD -> 1,3,4-butanetriol
Components:
Function Name Type Evidence Reference(s)
product 1,3,4-butanetriol simple_molecule nd nd
reactant 3,4-dihydroxybutanal simple_molecule nd nd
catalyzer YqhD protein nd nd
yqhD-dkgA_mRNA DkgA
Name: yqhD-dkgA_mRNA -> DkgA
Description: Translation of DkgA
Type: translation
Pathway Components: yqhD-dkgA_mRNA -> DkgA
Components:
Function Name Type Evidence Reference(s)
product DkgA protein nd nd
reactant yqhD-dkgA_mRNA RNA nd nd
DkgA isobutanol isobutanal
Name: isobutanol -> isobutanal
Description: Reaction transforming isobutanol into isobutanal
Type: state transition
Pathway Components: isobutanol - DkgA -> isobutanal
Components:
Function Name Type Evidence Reference(s)
catalyzer DkgA protein nd nd
product isobutanal simple_molecule nd nd
reactant isobutanol simple_molecule nd nd
DkgA ethyl-(2R)-methyl-(3S)-hydroxybutanoate ethyl-2-methylacetoacetate
Name: ethyl-(2R)-methyl-(3S)-hydroxybutanoate -> ethyl-2-methylacetoacetate
Description: Reaction transforming ethyl-(2R)-methyl-(3S)-hydroxybutanoate into ethyl-2-methylacetoacetate
Type: state transition
Pathway Components: ethyl-(2R)-methyl-(3S)-hydroxybutanoate - DkgA -> ethyl-2-methylacetoacetate
Components:
Function Name Type Evidence Reference(s)
catalyzer DkgA protein nd nd
reactant ethyl-(2R)-methyl-(3S)-hydroxybutanoate simple_molecule nd nd
product ethyl-2-methylacetoacetate simple_molecule nd nd
DkgA 2,5-diketo-D-gluconate sorbosonate
Name: 2,5-diketo-D-gluconate -> sorbosonate
Description: Reaction transforming 2,5-diketo-D-gluconate into sorbosonate
Type: state transition
Pathway Components: 2,5-diketo-D-gluconate - DkgA -> sorbosonate
Components:
Function Name Type Evidence Reference(s)
reactant 2,5-diketo-D-gluconate simple_molecule nd nd
catalyzer DkgA protein nd nd
product sorbosonate simple_molecule nd nd



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