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YpdB Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
phosphate YhjX YpdB yhjX yhjX_mRNA YpdB phosphate


Gensor Unit       
Name: YpdB
Signal name: volatile organic compounds
2
3-butanedione
glyoxylic acid
pyruvate.
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): biological_process GO:0031669 - cellular response to nutrient levels
GO:0055085 - transmembrane transport
cellular_component GO:0005887 - integral component of plasma membrane
GO:0005886 - plasma membrane
molecular_function GO:0005215 - transporter activity
Components:
Function Name Type
protein YhjX protein
protein YpdB protein
gene yhjX gene
RNA yhjX_mRNA RNA


Reactions       
Showing 2 reactions
YpdB yhjX yhjX_mRNA
Name: yhjX -> yhjX_mRNA
Description: Transcription of transcription unit yhjX. Reaction activation by YpdB.
Type: transcription
Pathway Components: yhjX - YpdB -> yhjX_mRNA
Components:
Function Name Type Evidence Reference(s)
activator YpdB protein nd nd
reactant yhjX gene nd nd
product yhjX_mRNA RNA nd nd
yhjX_mRNA YhjX
Name: yhjX_mRNA -> YhjX
Description: Translation of YhjX
Type: translation
Pathway Components: yhjX_mRNA -> YhjX
Components:
Function Name Type Evidence Reference(s)
product YhjX protein nd nd
reactant yhjX_mRNA RNA nd nd



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