RegulonDB RegulonDB

UidR Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
D-glucopyranuronate UidA UidB UidC UidR a D-glucoronoside a D-glucoronoside_Ext a glucuronide ROH uidABC uidABC_mRNA uidR uidR_mRNA


Gensor Unit       
Name: UidR
Classification:
Groups: GUs related to carbon source utilization
Gene Ontology Terms (GO): GO:0046930 - pore complex
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016020 - membrane
GO:0019391 - glucuronoside catabolic process
GO:0016798 - hydrolase activity, acting on glycosyl bonds
GO:0006811 - ion transport
GO:0003677 - DNA binding
GO:0005886 - plasma membrane
GO:0015288 - porin activity
GO:0008643 - carbohydrate transport
GO:0016021 - integral component of membrane
Read more >
Components:
Function Name Type
RNA uidR_mRNA RNA


Reactions       
Showing 8 reactions
uidABC uidABC_mRNA
Name: uidABC -> uidABC_mRNA
Description: Transcription of transcription unit uidABC; reaction inhibition by UidR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product uidABC_mRNA RNA nd nd
reactant uidABC gene nd nd
uidR uidR_mRNA
Name: uidR -> uidR_mRNA
Description: Transcription of transcription unit uidR; reaction inhibition by UidR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product uidR_mRNA RNA nd nd
reactant uidR gene nd nd
uidABC_mRNA UidB
Name: uidABC_mRNA -> UidB
Description: Translation of UidB
Type: translation
Components:
Function Name Type Evidence Reference(s)
product UidB protein nd nd
reactant uidABC_mRNA RNA nd nd
a D-glucoronoside_Ext a D-glucoronoside
Name: a D-glucoronoside_Ext -> a D-glucoronoside
Description: Transport of a D-glucoronoside_Ext through a bacterial membrane, leading to the presence of a D-glucoronoside inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product a D-glucoronoside simple molecule nd nd
reactant a D-glucoronoside_Ext simple molecule nd nd
uidABC_mRNA UidA
Name: uidABC_mRNA -> UidA
Description: Translation of UidA
Type: translation
Components:
Function Name Type Evidence Reference(s)
product UidA protein nd nd
reactant uidABC_mRNA RNA nd nd
a glucuronide D-glucopyranuronate + ROH
Name: a glucuronide -> D-glucopyranuronate + ROH
Description: Reaction transforming a glucuronide into D-glucopyranuronate, ROH
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product D-glucopyranuronate simple molecule nd nd
product ROH simple molecule nd nd
reactant a glucuronide simple molecule nd nd
uidABC_mRNA UidC
Name: uidABC_mRNA -> UidC
Description: Translation of UidC
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant uidABC_mRNA RNA nd nd
product UidC protein nd nd
uidR_mRNA UidR
Name: uidR_mRNA -> UidR
Description: Translation of UidR
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant uidR_mRNA RNA nd nd
product UidR protein nd nd



RegulonDB