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UxuR Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
KDG fructuronate fructuronate_Ext D-gluconate D-gluconate_Ext GlcA mannonate GntP UidA UidB UidC UxuA UxuB UxuR YjjM a glucuronide a glucoronide a glucoronide_Ext ROH gntP gntP_mRNA uidABC uidABC_mRNA uxuAB uxuAB_mRNA uxuR uxuR_mRNA This Gensor Unit is not yet available This Gensor Unit is not yet available UxuR fructuronate


Gensor Unit       
Name: UxuR
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): GO:0019594 - mannitol metabolic process
GO:0046930 - pore complex
GO:0050662 - coenzyme binding
GO:0003700 - transcription factor activity, sequence-specific DNA binding
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016491 - oxidoreductase activity
GO:0016020 - membrane
GO:0003824 - catalytic activity
GO:0019391 - glucuronoside catabolic process
GO:0015128 - gluconate transmembrane transporter activity
GO:0005887 - integral component of plasma membrane
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Components:
Function Name Type
RNA yjjM_mRNA RNA


Reactions       
Showing 21 reactions
gntP gntP_mRNA
Name: gntP -> gntP_mRNA
Description: Transcription of transcription unit gntP; reaction inhibition by OxyR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant gntP gene nd nd
product gntP_mRNA RNA nd nd
uidABC uidABC_mRNA
Name: uidABC -> uidABC_mRNA
Description: Transcription of transcription unit uidABC; reaction inhibition by UidR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product uidABC_mRNA RNA nd nd
reactant uidABC gene nd nd
uxuAB uxuAB_mRNA
Name: uxuAB -> uxuAB_mRNA
Description: Transcription of transcription unit uxuAB; reaction inhibition by ExuR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product uxuAB_mRNA RNA nd nd
reactant uxuAB gene nd nd
uxuR uxuR_mRNA
Name: uxuR -> uxuR_mRNA
Description: Transcription of transcription unit uxuR; reaction inhibition by ExuR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant uxuR gene nd nd
product uxuR_mRNA RNA nd nd
yjjM yjjM_mRNA
Name: yjjM -> yjjM_mRNA
Description: Transcription of transcription unit yjjM; reaction inhibition by UxuR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant yjjM gene nd nd
product yjjM_mRNA RNA nd nd
UxuR + fructuronate UxuR-fructuronate
Name: UxuR + fructuronate -> UxuR-fructuronate
Description: Reaction transforming UxuR, fructuronate into UxuR-fructuronate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant UxuR protein nd nd
product UxuR-fructuronate complex nd nd
reactant fructuronate simple molecule nd nd
uidABC_mRNA UidB
Name: uidABC_mRNA -> UidB
Description: Translation of UidB
Type: translation
Components:
Function Name Type Evidence Reference(s)
product UidB protein nd nd
reactant uidABC_mRNA RNA nd nd
a glucoronide_Ext a glucoronide
Name: a glucoronide_Ext -> a glucoronide
Description: Transport of a glucoronide_Ext through a bacterial membrane, leading to the presence of a glucoronide inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant a glucoronide_Ext simple molecule nd nd
product a glucoronide simple molecule nd nd
uxuAB_mRNA UxuA
Name: uxuAB_mRNA -> UxuA
Description: Translation of UxuA
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant uxuAB_mRNA RNA nd nd
product UxuA protein nd nd
mannonate KDG
Name: mannonate -> KDG
Description: Reaction transforming mannonate into KDG
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product KDG simple molecule nd nd
reactant mannonate simple molecule nd nd
uxuAB_mRNA UxuB
Name: uxuAB_mRNA -> UxuB
Description: Translation of UxuB
Type: translation
Components:
Function Name Type Evidence Reference(s)
product UxuB protein nd nd
reactant uxuAB_mRNA RNA nd nd
mannonate fructuronate
Name: mannonate -> fructuronate
Description: Reaction transforming mannonate into fructuronate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant mannonate simple molecule nd nd
product fructuronate simple molecule nd nd
gntP_mRNA GntP
Name: gntP_mRNA -> GntP
Description: Translation of GntP
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant gntP_mRNA RNA nd nd
product GntP protein nd nd
fructuronate_Ext fructuronate
Name: fructuronate_Ext -> fructuronate
Description: Transport of fructuronate_Ext through a bacterial membrane, leading to the presence of fructuronate inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product fructuronate simple molecule nd nd
reactant fructuronate_Ext simple molecule nd nd
D-gluconate_Ext D-gluconate
Name: D-gluconate_Ext -> D-gluconate
Description: Transport of D-gluconate_Ext through a bacterial membrane, leading to the presence of D-gluconate inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant D-gluconate_Ext simple molecule nd nd
product D-gluconate simple molecule nd nd
uidABC_mRNA UidA
Name: uidABC_mRNA -> UidA
Description: Translation of UidA
Type: translation
Components:
Function Name Type Evidence Reference(s)
product UidA protein nd nd
reactant uidABC_mRNA RNA nd nd
a glucuronide GlcA + ROH
Name: a glucuronide -> GlcA + ROH
Description: Reaction transforming a glucuronide into GlcA, ROH
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product ROH simple molecule nd nd
reactant a glucuronide simple molecule nd nd
product GlcA simple molecule nd nd
uidABC_mRNA UidC
Name: uidABC_mRNA -> UidC
Description: Translation of UidC
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant uidABC_mRNA RNA nd nd
product UidC protein nd nd
yjjM_mRNA YjjM
Name: yjjM_mRNA -> YjjM
Description: Translation of YjjM
Type: translation
Components:
Function Name Type Evidence Reference(s)
product YjjM protein nd nd
reactant yjjM_mRNA RNA nd nd
uxuR_mRNA UxuR
Name: uxuR_mRNA -> UxuR
Description: Translation of UxuR
Type: translation
Components:
Function Name Type Evidence Reference(s)
product UxuR protein nd nd
reactant uxuR_mRNA RNA nd nd
GlcA fructuronate
Name: GlcA -> fructuronate
Description: Transformation of GlcA into fructuronate by one, or two/three reactions not shown.
Type: super-reaction
Components:
Function Name Type Evidence Reference(s)
reactant GlcA simple molecule nd nd
product fructuronate simple molecule nd nd



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