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StpA Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
6-phospho-beta-D-glucosyl-(1,4)-D-glucose BglB BglF BglG LeuO StpA arbutin-6P hydroquinol beta-glucose beta-D-glucose-6-P bglG bglGFB bglGFB_mRNA bglG_mRNA Ursin_Ext leuO leuO_mRNA methyl beta-D-glucoside 6-phosphate b-methyl-D-glucoside_Ext PEP_Ext pyruvate salicin-6-phosphate salicin_Ext saligenin stpA stpA_mRNA pyruvate


Gensor Unit       
Name: StpA
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): biological_process GO:0005975 - carbohydrate metabolic process
GO:0034219 - carbohydrate transmembrane transport
GO:0008643 - carbohydrate transport
GO:0022611 - dormancy process
GO:0009396 - folic acid-containing compound biosynthetic process
GO:0016458 - gene silencing
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cellular_component GO:0005737 - cytoplasm
GO:0005829 - cytosol
GO:0016021 - integral component of membrane
GO:0016020 - membrane
GO:0009295 - nucleoid
GO:0005886 - plasma membrane
GO:0032993 - protein-DNA complex
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molecular_function GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity
GO:0008706 - 6-phospho-beta-glucosidase activity
GO:0003677 - DNA binding
GO:0003723 - RNA binding
GO:0001217 - bacterial-type RNA polymerase transcriptional repressor activity, sequence-specific DNA binding
GO:0003681 - bent DNA binding
GO:0008422 - beta-glucosidase activity
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Components: Show/Hide Components Table (37 more...)
Function Name Type
protein BglB protein
protein BglF protein
protein BglG protein
simple_molecule CH-THF mono-L-glutamate simple_molecule
protein Fau protein
simple_molecule HPr - phosphorylated_Ext simple_molecule
protein LeuO protein
simple_molecule PtsH simple_molecule
protein RNA:SsrS protein
protein StpA protein
simple_molecule Ursin_Ext simple_molecule
simple_molecule arbutin-6P simple_molecule
simple_molecule b-methyl-D-glucoside_Ext simple_molecule
simple_molecule beta-D-cellobiose-6'-p simple_molecule
simple_molecule beta-D-glucose-6-P simple_molecule
simple_molecule beta-glucose_Ext simple_molecule
gene bglG gene
gene bglGFB gene
RNA bglGFB_mRNA RNA
RNA bglG_mRNA RNA
simple_molecule folinate simple_molecule
simple_molecule glucopyranose simple_molecule
simple_molecule glucose-6-P simple_molecule
simple_molecule hydroquinol simple_molecule
gene leuO gene
RNA leuO_mRNA RNA
simple_molecule methyl beta-D-glucoside 6-phosphate simple_molecule
simple_molecule phosphate simple_molecule
simple_molecule salicin-6-p simple_molecule
simple_molecule salicin_Ext simple_molecule
simple_molecule saligenin simple_molecule
gene ssrS gene
gene ssrS-fau gene
RNA ssrS-fau_mRNA RNA
RNA ssrS_mRNA RNA
gene stpA gene
RNA stpA_mRNA RNA


Reactions       
Showing 23 reactions
StpA bglG bglG_mRNA
Name: bglG -> bglG_mRNA
Description: Transcription of transcription unit bglG. Reaction inhibition by StpA.
Type: transcription
Pathway Components: bglG - StpA -> bglG_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor StpA protein nd nd
reactant bglG gene nd nd
product bglG_mRNA RNA nd nd
StpA bglGFB bglGFB_mRNA
Name: bglGFB -> bglGFB_mRNA
Description: Transcription of transcription unit bglGFB. Reaction inhibition by StpA.
Type: transcription
Pathway Components: bglGFB - StpA -> bglGFB_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor StpA protein nd nd
reactant bglGFB gene nd nd
product bglGFB_mRNA RNA nd nd
StpA leuO leuO_mRNA
Name: leuO -> leuO_mRNA
Description: Transcription of transcription unit leuO. Reaction inhibition by StpA.
Type: transcription
Pathway Components: leuO - StpA -> leuO_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor StpA protein nd nd
reactant leuO gene nd nd
product leuO_mRNA RNA nd nd
StpA ssrS ssrS_mRNA
Name: ssrS -> ssrS_mRNA
Description: Transcription of transcription unit ssrS. Reaction inhibition by StpA.
Type: transcription
Pathway Components: ssrS - StpA -> ssrS_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor StpA protein nd nd
reactant ssrS gene nd nd
product ssrS_mRNA RNA nd nd
StpA ssrS-fau ssrS-fau_mRNA
Name: ssrS-fau -> ssrS-fau_mRNA
Description: Transcription of transcription unit ssrS-fau. Reaction inhibition by StpA.
Type: transcription
Pathway Components: ssrS-fau - StpA -> ssrS-fau_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor StpA protein nd nd
reactant ssrS-fau gene nd nd
product ssrS-fau_mRNA RNA nd nd
StpA stpA stpA_mRNA
Name: stpA -> stpA_mRNA
Description: Transcription of transcription unit stpA. Reaction inhibition by StpA.
Type: transcription
Pathway Components: stpA - StpA -> stpA_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor StpA protein nd nd
reactant stpA gene nd nd
product stpA_mRNA RNA nd nd
bglGFB_mRNA BglG
Name: bglGFB_mRNA -> BglG
Description: Translation of BglG
Type: translation
Pathway Components: bglGFB_mRNA -> BglG
Components:
Function Name Type Evidence Reference(s)
product BglG protein nd nd
reactant bglGFB_mRNA RNA nd nd
bglGFB_mRNA BglF
Name: bglGFB_mRNA -> BglF
Description: Translation of BglF
Type: translation
Pathway Components: bglGFB_mRNA -> BglF
Components:
Function Name Type Evidence Reference(s)
product BglF protein nd nd
reactant bglGFB_mRNA RNA nd nd
BglF Reactants methyl beta-D-glucoside 6-phosphate + PtsH
Name: b-methyl-D-glucoside_Ext + HPr - phosphorylated_Ext -> methyl beta-D-glucoside 6-phosphate + PtsH
Description: Transport of b-methyl-D-glucoside_Ext, HPr - phosphorylated_Ext through a bacterial membrane, leading to the presence of methyl beta-D-glucoside 6-phosphate, PtsH inside the cell.
Type: transport
Pathway Components: b-methyl-D-glucoside_Ext + HPr - phosphorylated_Ext - BglF -> methyl beta-D-glucoside 6-phosphate + PtsH
Components:
Function Name Type Evidence Reference(s)
catalyzer BglF protein nd nd
reactant HPr - phosphorylated_Ext simple_molecule nd nd
product PtsH simple_molecule nd nd
reactant b-methyl-D-glucoside_Ext simple_molecule nd nd
product methyl beta-D-glucoside 6-phosphate simple_molecule nd nd
BglF HPr - phosphorylated_Ext + Ursin_Ext arbutin-6P + PtsH
Name: HPr - phosphorylated_Ext + Ursin_Ext -> arbutin-6P + PtsH
Description: Transport of HPr - phosphorylated_Ext, Ursin_Ext through a bacterial membrane, leading to the presence of arbutin-6P, PtsH inside the cell.
Type: transport
Pathway Components: HPr - phosphorylated_Ext + Ursin_Ext - BglF -> arbutin-6P + PtsH
Components:
Function Name Type Evidence Reference(s)
catalyzer BglF protein nd nd
reactant HPr - phosphorylated_Ext simple_molecule nd nd
product PtsH simple_molecule nd nd
reactant Ursin_Ext simple_molecule nd nd
product arbutin-6P simple_molecule nd nd
BglF HPr - phosphorylated_Ext + salicin_Ext salicin-6-p + PtsH
Name: HPr - phosphorylated_Ext + salicin_Ext -> salicin-6-p + PtsH
Description: Transport of HPr - phosphorylated_Ext, salicin_Ext through a bacterial membrane, leading to the presence of salicin-6-p, PtsH inside the cell.
Type: transport
Pathway Components: HPr - phosphorylated_Ext + salicin_Ext - BglF -> salicin-6-p + PtsH
Components:
Function Name Type Evidence Reference(s)
catalyzer BglF protein nd nd
reactant HPr - phosphorylated_Ext simple_molecule nd nd
product PtsH simple_molecule nd nd
product salicin-6-p simple_molecule nd nd
reactant salicin_Ext simple_molecule nd nd
BglF HPr - phosphorylated_Ext + beta-glucose_Ext beta-D-glucose-6-P + PtsH
Name: HPr - phosphorylated_Ext + beta-glucose_Ext -> beta-D-glucose-6-P + PtsH
Description: Transport of HPr - phosphorylated_Ext, beta-glucose_Ext through a bacterial membrane, leading to the presence of beta-D-glucose-6-P, PtsH inside the cell.
Type: transport
Pathway Components: HPr - phosphorylated_Ext + beta-glucose_Ext - BglF -> beta-D-glucose-6-P + PtsH
Components:
Function Name Type Evidence Reference(s)
catalyzer BglF protein nd nd
reactant HPr - phosphorylated_Ext simple_molecule nd nd
product PtsH simple_molecule nd nd
product beta-D-glucose-6-P simple_molecule nd nd
reactant beta-glucose_Ext simple_molecule nd nd
bglGFB_mRNA BglB
Name: bglGFB_mRNA -> BglB
Description: Translation of BglB
Type: translation
Pathway Components: bglGFB_mRNA -> BglB
Components:
Function Name Type Evidence Reference(s)
product BglB protein nd nd
reactant bglGFB_mRNA RNA nd nd
BglB salicin-6-p beta-D-glucose-6-P + saligenin
Name: salicin-6-p -> beta-D-glucose-6-P + saligenin
Description: Reaction transforming salicin-6-p into beta-D-glucose-6-P, saligenin
Type: state transition
Pathway Components: salicin-6-p - BglB -> beta-D-glucose-6-P + saligenin
Components:
Function Name Type Evidence Reference(s)
catalyzer BglB protein nd nd
product beta-D-glucose-6-P simple_molecule nd nd
reactant salicin-6-p simple_molecule nd nd
product saligenin simple_molecule nd nd
BglB arbutin-6P beta-D-glucose-6-P + hydroquinol
Name: arbutin-6P -> beta-D-glucose-6-P + hydroquinol
Description: Reaction transforming arbutin-6P into beta-D-glucose-6-P, hydroquinol
Type: state transition
Pathway Components: arbutin-6P - BglB -> beta-D-glucose-6-P + hydroquinol
Components:
Function Name Type Evidence Reference(s)
catalyzer BglB protein nd nd
reactant arbutin-6P simple_molecule nd nd
product beta-D-glucose-6-P simple_molecule nd nd
product hydroquinol simple_molecule nd nd
BglB beta-D-cellobiose-6'-p glucopyranose + glucose-6-P
Name: beta-D-cellobiose-6'-p -> glucopyranose + glucose-6-P
Description: Reaction transforming beta-D-cellobiose-6'-p into glucopyranose, glucose-6-P
Type: state transition
Pathway Components: beta-D-cellobiose-6'-p - BglB -> glucopyranose + glucose-6-P
Components:
Function Name Type Evidence Reference(s)
catalyzer BglB protein nd nd
reactant beta-D-cellobiose-6'-p simple_molecule nd nd
product glucopyranose simple_molecule nd nd
product glucose-6-P simple_molecule nd nd
ssrS_mRNA RNA:SsrS
Name: ssrS_mRNA -> RNA:SsrS
Description: Translation of RNA:SsrS
Type: translation
Pathway Components: ssrS_mRNA -> RNA:SsrS
Components:
Function Name Type Evidence Reference(s)
product RNA:SsrS protein nd nd
reactant ssrS_mRNA RNA nd nd
bglG_mRNA BglG
Name: bglG_mRNA -> BglG
Description: Translation of BglG
Type: translation
Pathway Components: bglG_mRNA -> BglG
Components:
Function Name Type Evidence Reference(s)
product BglG protein nd nd
reactant bglG_mRNA RNA nd nd
stpA_mRNA StpA
Name: stpA_mRNA -> StpA
Description: Translation of StpA
Type: translation
Pathway Components: stpA_mRNA -> StpA
Components:
Function Name Type Evidence Reference(s)
product StpA protein nd nd
reactant stpA_mRNA RNA nd nd
leuO_mRNA LeuO
Name: leuO_mRNA -> LeuO
Description: Translation of LeuO
Type: translation
Pathway Components: leuO_mRNA -> LeuO
Components:
Function Name Type Evidence Reference(s)
product LeuO protein nd nd
reactant leuO_mRNA RNA nd nd
ssrS-fau_mRNA RNA:SsrS
Name: ssrS-fau_mRNA -> RNA:SsrS
Description: Translation of RNA:SsrS
Type: translation
Pathway Components: ssrS-fau_mRNA -> RNA:SsrS
Components:
Function Name Type Evidence Reference(s)
product RNA:SsrS protein nd nd
reactant ssrS-fau_mRNA RNA nd nd
ssrS-fau_mRNA Fau
Name: ssrS-fau_mRNA -> Fau
Description: Translation of Fau
Type: translation
Pathway Components: ssrS-fau_mRNA -> Fau
Components:
Function Name Type Evidence Reference(s)
product Fau protein nd nd
reactant ssrS-fau_mRNA RNA nd nd
Fau folinate CH-THF mono-L-glutamate + phosphate
Name: folinate -> CH-THF mono-L-glutamate + phosphate
Description: Reaction transforming folinate into CH-THF mono-L-glutamate, phosphate
Type: state transition
Pathway Components: folinate - Fau -> CH-THF mono-L-glutamate + phosphate
Components:
Function Name Type Evidence Reference(s)
product CH-THF mono-L-glutamate simple_molecule nd nd
catalyzer Fau protein nd nd
reactant folinate simple_molecule nd nd
product phosphate simple_molecule nd nd



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