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RcsAB Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
CsgD CsgE CsgF CsgG FlhC FlhD RcsA WcaA WcaB Wza Wzb Wzc YjbE YjbF YjbG YjbH protein tyrosine a protein-L-tyrosine phosphate csgDEFG csgDEFG_mRNA CsgA CsgA_Ext flhDC flhDC_mRNA phosphate rcsA rcsA_mRNA wza-wzb-wzc-wcaAB wza-wzb-wzc-wcaAB_mRNA yjbE yjbEFGH yjbEFGH_mRNA yjbE_mRNA CsgG CsgE CsgF RcsB RcsA RcsB


Gensor Unit       
Name: RcsAB
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): GO:0046930 - pore complex
GO:0008270 - zinc ion binding
GO:0015774 - polysaccharide transport
GO:0003700 - transcription factor activity, sequence-specific DNA binding
GO:0000986 - bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding
GO:0016020 - membrane
GO:0000271 - polysaccharide biosynthetic process
GO:0030234 - enzyme regulator activity
GO:0045227 - capsule polysaccharide biosynthetic process
GO:1902208 - regulation of bacterial-type flagellum assembly
GO:0044010 - single-species biofilm formation
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Components:
Function Name Type
RNA yjbE_mRNA RNA


Reactions       
Showing 28 reactions
csgDEFG csgDEFG_mRNA
Name: csgDEFG -> csgDEFG_mRNA
Description: Transcription of transcription unit csgDEFG; reaction activation by BasR-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product csgDEFG_mRNA RNA nd nd
reactant csgDEFG gene nd nd
flhDC flhDC_mRNA
Name: flhDC -> flhDC_mRNA
Description: Transcription of transcription unit flhDC; reaction inhibition by FliZ.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant flhDC gene nd nd
product flhDC_mRNA RNA nd nd
rcsA rcsA_mRNA
Name: rcsA -> rcsA_mRNA
Description: Transcription of transcription unit rcsA; reaction activation by GadE.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product rcsA_mRNA RNA nd nd
reactant rcsA gene nd nd
wza-wzb-wzc-wcaAB wza-wzb-wzc-wcaAB_mRNA
Name: wza-wzb-wzc-wcaAB -> wza-wzb-wzc-wcaAB_mRNA
Description: Transcription of transcription unit wza-wzb-wzc-wcaAB; reaction activation by RcsAB.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant wza-wzb-wzc-wcaAB gene nd nd
product wza-wzb-wzc-wcaAB_mRNA RNA nd nd
yjbE yjbE_mRNA
Name: yjbE -> yjbE_mRNA
Description: Transcription of transcription unit yjbE; reaction activation by RcsAB.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant yjbE gene nd nd
product yjbE_mRNA RNA nd nd
yjbEFGH yjbEFGH_mRNA
Name: yjbEFGH -> yjbEFGH_mRNA
Description: Transcription of transcription unit yjbEFGH; reaction activation by RcsAB.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product yjbEFGH_mRNA RNA nd nd
reactant yjbEFGH gene nd nd
csgDEFG_mRNA CsgF
Name: csgDEFG_mRNA -> CsgF
Description: Translation of CsgF
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant csgDEFG_mRNA RNA nd nd
product CsgF protein nd nd
CsgG + CsgE + CsgF CsgG-CsgE-CsgF
Name: CsgG + CsgE + CsgF -> CsgG-CsgE-CsgF
Description: Reaction transforming CsgG, CsgE, CsgF into CsgG-CsgE-CsgF
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product CsgG-CsgE-CsgF complex nd nd
reactant CsgF protein nd nd
reactant CsgG protein nd nd
reactant CsgE protein nd nd
CsgA_Ext CsgA
Name: CsgA_Ext -> CsgA
Description: Transport of CsgA_Ext through a bacterial membrane, leading to the presence of CsgA inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant CsgA_Ext simple molecule nd nd
product CsgA simple molecule nd nd
flhDC_mRNA FlhD
Name: flhDC_mRNA -> FlhD
Description: Translation of FlhD
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant flhDC_mRNA RNA nd nd
product FlhD protein nd nd
yjbEFGH_mRNA YjbG
Name: yjbEFGH_mRNA -> YjbG
Description: Translation of YjbG
Type: translation
Components:
Function Name Type Evidence Reference(s)
product YjbG protein nd nd
reactant yjbEFGH_mRNA RNA nd nd
rcsA_mRNA RcsA
Name: rcsA_mRNA -> RcsA
Description: Translation of RcsA
Type: translation
Components:
Function Name Type Evidence Reference(s)
product RcsA protein nd nd
reactant rcsA_mRNA RNA nd nd
wza-wzb-wzc-wcaAB_mRNA WcaB
Name: wza-wzb-wzc-wcaAB_mRNA -> WcaB
Description: Translation of WcaB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant wza-wzb-wzc-wcaAB_mRNA RNA nd nd
product WcaB protein nd nd
csgDEFG_mRNA CsgE
Name: csgDEFG_mRNA -> CsgE
Description: Translation of CsgE
Type: translation
Components:
Function Name Type Evidence Reference(s)
product CsgE protein nd nd
reactant csgDEFG_mRNA RNA nd nd
wza-wzb-wzc-wcaAB_mRNA Wza
Name: wza-wzb-wzc-wcaAB_mRNA -> Wza
Description: Translation of Wza
Type: translation
Components:
Function Name Type Evidence Reference(s)
product Wza protein nd nd
reactant wza-wzb-wzc-wcaAB_mRNA RNA nd nd
yjbEFGH_mRNA YjbE
Name: yjbEFGH_mRNA -> YjbE
Description: Translation of YjbE
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant yjbEFGH_mRNA RNA nd nd
product YjbE protein nd nd
wza-wzb-wzc-wcaAB_mRNA WcaA
Name: wza-wzb-wzc-wcaAB_mRNA -> WcaA
Description: Translation of WcaA
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant wza-wzb-wzc-wcaAB_mRNA RNA nd nd
product WcaA protein nd nd
yjbEFGH_mRNA YjbH
Name: yjbEFGH_mRNA -> YjbH
Description: Translation of YjbH
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant yjbEFGH_mRNA RNA nd nd
product YjbH protein nd nd
csgDEFG_mRNA CsgD
Name: csgDEFG_mRNA -> CsgD
Description: Translation of CsgD
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant csgDEFG_mRNA RNA nd nd
product CsgD protein nd nd
wza-wzb-wzc-wcaAB_mRNA Wzc
Name: wza-wzb-wzc-wcaAB_mRNA -> Wzc
Description: Translation of Wzc
Type: translation
Components:
Function Name Type Evidence Reference(s)
product Wzc protein nd nd
reactant wza-wzb-wzc-wcaAB_mRNA RNA nd nd
protein tyrosine a protein-L-tyrosine phosphate
Name: protein tyrosine -> a protein-L-tyrosine phosphate
Description: Reaction transforming protein tyrosine into a protein-L-tyrosine phosphate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant protein tyrosine simple molecule nd nd
product a protein-L-tyrosine phosphate simple molecule nd nd
csgDEFG_mRNA CsgG
Name: csgDEFG_mRNA -> CsgG
Description: Translation of CsgG
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant csgDEFG_mRNA RNA nd nd
product CsgG protein nd nd
yjbEFGH_mRNA YjbF
Name: yjbEFGH_mRNA -> YjbF
Description: Translation of YjbF
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant yjbEFGH_mRNA RNA nd nd
product YjbF protein nd nd
wza-wzb-wzc-wcaAB_mRNA Wzb
Name: wza-wzb-wzc-wcaAB_mRNA -> Wzb
Description: Translation of Wzb
Type: translation
Components:
Function Name Type Evidence Reference(s)
product Wzb protein nd nd
reactant wza-wzb-wzc-wcaAB_mRNA RNA nd nd
a protein-L-tyrosine phosphate phosphate + protein tyrosine
Name: a protein-L-tyrosine phosphate -> phosphate + protein tyrosine
Description: Reaction transforming a protein-L-tyrosine phosphate into phosphate, protein tyrosine
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant a protein-L-tyrosine phosphate simple molecule nd nd
product protein tyrosine simple molecule nd nd
product phosphate simple molecule nd nd
flhDC_mRNA FlhC
Name: flhDC_mRNA -> FlhC
Description: Translation of FlhC
Type: translation
Components:
Function Name Type Evidence Reference(s)
product FlhC protein nd nd
reactant flhDC_mRNA RNA nd nd
RcsA + RcsB RcsAB
Name: RcsA + RcsB -> RcsAB
Description: Reaction transforming RcsA, RcsB into RcsAB
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product RcsAB protein nd nd
reactant RcsB protein nd nd
reactant RcsA protein nd nd
yjbE_mRNA YjbE
Name: yjbE_mRNA -> YjbE
Description: Translation of YjbE
Type: translation
Components:
Function Name Type Evidence Reference(s)
product YjbE protein nd nd
reactant yjbE_mRNA RNA nd nd



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