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RcsAB Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
CsgD CsgE CsgF CsgG FlhC FlhD RcsA WcaA WcaB Wza Wzb Wzc YjbE YjbF YjbG YjbH protein tyrosine a protein-L-tyrosine phosphate csgDEFG csgDEFG_mRNA CsgA CsgA_Ext flhDC flhDC_mRNA phosphate rcsA rcsA_mRNA wza-wzb-wzc-wcaAB wza-wzb-wzc-wcaAB_mRNA yjbE yjbEFGH yjbEFGH_mRNA yjbE_mRNA CsgG CsgE CsgF RcsB RcsA RcsB


Gensor Unit       
Name: RcsAB
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): biological_process GO:0042710 - biofilm formation
GO:0022610 - biological adhesion
GO:0009242 - colanic acid biosynthetic process
GO:0019344 - cysteine biosynthetic process
GO:0045226 - extracellular polysaccharide biosynthetic process
GO:0038083 - peptidyl-tyrosine autophosphorylation
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cellular_component GO:0009279 - cell outer membrane
GO:0005829 - cytosol
GO:0045203 - integral component of cell outer membrane
GO:0005887 - integral component of plasma membrane
GO:0031246 - intrinsic component of periplasmic side of cell outer membrane
GO:0016020 - membrane
GO:0030288 - outer membrane-bounded periplasmic space
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molecular_function GO:0016887 - ATPase activity
GO:0016407 - acetyltransferase activity
GO:0000986 - bacterial-type proximal promoter sequence-specific DNA binding
GO:0042802 - identical protein binding
GO:0004713 - protein tyrosine kinase activity
GO:0004725 - protein tyrosine phosphatase activity
GO:0009001 - serine O-acetyltransferase activity
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Components: Show/Hide Components Table (39 more...)
Function Name Type
simple_molecule CsgA simple_molecule
simple_molecule CsgA_Ext simple_molecule
protein CsgD protein
protein CsgE protein
complex CsgE-CsgG complex
protein CsgF protein
protein CsgG protein
protein FlhC protein
protein FlhD protein
complex FlhD-FlhC complex
protein RcsA protein
protein RcsAB protein
protein RcsB protein
complex RcsB-RcsA complex
protein WcaA protein
protein WcaB protein
protein Wza protein
complex Wza-Wzc complex
protein Wzb protein
protein Wzc protein
protein YjbE protein
protein YjbF protein
protein YjbG protein
protein YjbH protein
simple_molecule [protein] tyrosine phosphate simple_molecule
gene csgDEFG gene
RNA csgDEFG_mRNA RNA
gene flhDC gene
RNA flhDC_mRNA RNA
simple_molecule phosphate simple_molecule
simple_molecule protein tyrosine simple_molecule
gene rcsA gene
RNA rcsA_mRNA RNA
gene wza-wzb-wzc-wcaAB gene
RNA wza-wzb-wzc-wcaAB_mRNA RNA
gene yjbE gene
gene yjbEFGH gene
RNA yjbEFGH_mRNA RNA
RNA yjbE_mRNA RNA


Reactions       
Showing 30 reactions
RcsAB csgDEFG csgDEFG_mRNA
Name: csgDEFG -> csgDEFG_mRNA
Description: Transcription of transcription unit csgDEFG. Reaction inhibition by RcsAB.
Type: transcription
Pathway Components: csgDEFG - RcsAB -> csgDEFG_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor RcsAB protein nd nd
reactant csgDEFG gene nd nd
product csgDEFG_mRNA RNA nd nd
RcsAB flhDC flhDC_mRNA
Name: flhDC -> flhDC_mRNA
Description: Transcription of transcription unit flhDC. Reaction inhibition by RcsAB.
Type: transcription
Pathway Components: flhDC - RcsAB -> flhDC_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor RcsAB protein nd nd
reactant flhDC gene nd nd
product flhDC_mRNA RNA nd nd
RcsAB rcsA rcsA_mRNA
Name: rcsA -> rcsA_mRNA
Description: Transcription of transcription unit rcsA. Reaction activation by RcsAB.
Type: transcription
Pathway Components: rcsA - RcsAB -> rcsA_mRNA
Components:
Function Name Type Evidence Reference(s)
activator RcsAB protein nd nd
reactant rcsA gene nd nd
product rcsA_mRNA RNA nd nd
RcsAB wza-wzb-wzc-wcaAB wza-wzb-wzc-wcaAB_mRNA
Name: wza-wzb-wzc-wcaAB -> wza-wzb-wzc-wcaAB_mRNA
Description: Transcription of transcription unit wza-wzb-wzc-wcaAB. Reaction activation by RcsAB.
Type: transcription
Pathway Components: wza-wzb-wzc-wcaAB - RcsAB -> wza-wzb-wzc-wcaAB_mRNA
Components:
Function Name Type Evidence Reference(s)
activator RcsAB protein nd nd
reactant wza-wzb-wzc-wcaAB gene nd nd
product wza-wzb-wzc-wcaAB_mRNA RNA nd nd
RcsAB yjbE yjbE_mRNA
Name: yjbE -> yjbE_mRNA
Description: Transcription of transcription unit yjbE. Reaction activation by RcsAB.
Type: transcription
Pathway Components: yjbE - RcsAB -> yjbE_mRNA
Components:
Function Name Type Evidence Reference(s)
activator RcsAB protein nd nd
reactant yjbE gene nd nd
product yjbE_mRNA RNA nd nd
RcsAB yjbEFGH yjbEFGH_mRNA
Name: yjbEFGH -> yjbEFGH_mRNA
Description: Transcription of transcription unit yjbEFGH. Reaction activation by RcsAB.
Type: transcription
Pathway Components: yjbEFGH - RcsAB -> yjbEFGH_mRNA
Components:
Function Name Type Evidence Reference(s)
activator RcsAB protein nd nd
reactant yjbEFGH gene nd nd
product yjbEFGH_mRNA RNA nd nd
wza-wzb-wzc-wcaAB_mRNA Wza
Name: wza-wzb-wzc-wcaAB_mRNA -> Wza
Description: Translation of Wza
Type: translation
Pathway Components: wza-wzb-wzc-wcaAB_mRNA -> Wza
Components:
Function Name Type Evidence Reference(s)
product Wza protein nd nd
reactant wza-wzb-wzc-wcaAB_mRNA RNA nd nd
Wza + Wzc Wza-Wzc
Name: Wza + Wzc -> Wza-Wzc
Description: Reaction transforming Wza, Wzc into Wza-Wzc
Type: state transition
Pathway Components: Wza + Wzc -> Wza-Wzc
Components:
Function Name Type Evidence Reference(s)
reactant Wza protein nd nd
product Wza-Wzc complex nd nd
reactant Wzc protein nd nd
wza-wzb-wzc-wcaAB_mRNA Wzb
Name: wza-wzb-wzc-wcaAB_mRNA -> Wzb
Description: Translation of Wzb
Type: translation
Pathway Components: wza-wzb-wzc-wcaAB_mRNA -> Wzb
Components:
Function Name Type Evidence Reference(s)
product Wzb protein nd nd
reactant wza-wzb-wzc-wcaAB_mRNA RNA nd nd
Wzb [protein] tyrosine phosphate protein tyrosine + phosphate
Name: [protein] tyrosine phosphate -> protein tyrosine + phosphate
Description: Reaction transforming [protein] tyrosine phosphate into protein tyrosine, phosphate
Type: state transition
Pathway Components: [protein] tyrosine phosphate - Wzb -> protein tyrosine + phosphate
Components:
Function Name Type Evidence Reference(s)
catalyzer Wzb protein nd nd
reactant [protein] tyrosine phosphate simple_molecule nd nd
product phosphate simple_molecule nd nd
product protein tyrosine simple_molecule nd nd
wza-wzb-wzc-wcaAB_mRNA Wzc
Name: wza-wzb-wzc-wcaAB_mRNA -> Wzc
Description: Translation of Wzc
Type: translation
Pathway Components: wza-wzb-wzc-wcaAB_mRNA -> Wzc
Components:
Function Name Type Evidence Reference(s)
product Wzc protein nd nd
reactant wza-wzb-wzc-wcaAB_mRNA RNA nd nd
Wzc protein tyrosine [protein] tyrosine phosphate
Name: protein tyrosine -> [protein] tyrosine phosphate
Description: Reaction transforming protein tyrosine into [protein] tyrosine phosphate
Type: state transition
Pathway Components: protein tyrosine - Wzc -> [protein] tyrosine phosphate
Components:
Function Name Type Evidence Reference(s)
catalyzer Wzc protein nd nd
product [protein] tyrosine phosphate simple_molecule nd nd
reactant protein tyrosine simple_molecule nd nd
wza-wzb-wzc-wcaAB_mRNA WcaA
Name: wza-wzb-wzc-wcaAB_mRNA -> WcaA
Description: Translation of WcaA
Type: translation
Pathway Components: wza-wzb-wzc-wcaAB_mRNA -> WcaA
Components:
Function Name Type Evidence Reference(s)
product WcaA protein nd nd
reactant wza-wzb-wzc-wcaAB_mRNA RNA nd nd
wza-wzb-wzc-wcaAB_mRNA WcaB
Name: wza-wzb-wzc-wcaAB_mRNA -> WcaB
Description: Translation of WcaB
Type: translation
Pathway Components: wza-wzb-wzc-wcaAB_mRNA -> WcaB
Components:
Function Name Type Evidence Reference(s)
product WcaB protein nd nd
reactant wza-wzb-wzc-wcaAB_mRNA RNA nd nd
csgDEFG_mRNA CsgD
Name: csgDEFG_mRNA -> CsgD
Description: Translation of CsgD
Type: translation
Pathway Components: csgDEFG_mRNA -> CsgD
Components:
Function Name Type Evidence Reference(s)
product CsgD protein nd nd
reactant csgDEFG_mRNA RNA nd nd
csgDEFG_mRNA CsgE
Name: csgDEFG_mRNA -> CsgE
Description: Translation of CsgE
Type: translation
Pathway Components: csgDEFG_mRNA -> CsgE
Components:
Function Name Type Evidence Reference(s)
product CsgE protein nd nd
reactant csgDEFG_mRNA RNA nd nd
CsgG + CsgE CsgE-CsgG
Name: CsgG + CsgE -> CsgE-CsgG
Description: Reaction transforming CsgG, CsgE into CsgE-CsgG
Type: state transition
Pathway Components: CsgG + CsgE -> CsgE-CsgG
Components:
Function Name Type Evidence Reference(s)
reactant CsgE protein nd nd
product CsgE-CsgG complex nd nd
reactant CsgG protein nd nd
CsgE-CsgG CsgA_Ext CsgA
Name: CsgA_Ext -> CsgA
Description: Transport of CsgA_Ext through a bacterial membrane, leading to the presence of CsgA inside the cell.
Type: transport
Pathway Components: CsgA_Ext - CsgE-CsgG -> CsgA
Components:
Function Name Type Evidence Reference(s)
product CsgA simple_molecule nd nd
reactant CsgA_Ext simple_molecule nd nd
catalyzer CsgE-CsgG complex nd nd
csgDEFG_mRNA CsgF
Name: csgDEFG_mRNA -> CsgF
Description: Translation of CsgF
Type: translation
Pathway Components: csgDEFG_mRNA -> CsgF
Components:
Function Name Type Evidence Reference(s)
product CsgF protein nd nd
reactant csgDEFG_mRNA RNA nd nd
csgDEFG_mRNA CsgG
Name: csgDEFG_mRNA -> CsgG
Description: Translation of CsgG
Type: translation
Pathway Components: csgDEFG_mRNA -> CsgG
Components:
Function Name Type Evidence Reference(s)
product CsgG protein nd nd
reactant csgDEFG_mRNA RNA nd nd
flhDC_mRNA FlhD
Name: flhDC_mRNA -> FlhD
Description: Translation of FlhD
Type: translation
Pathway Components: flhDC_mRNA -> FlhD
Components:
Function Name Type Evidence Reference(s)
product FlhD protein nd nd
reactant flhDC_mRNA RNA nd nd
FlhC + FlhD FlhD-FlhC
Name: FlhC + FlhD -> FlhD-FlhC
Description: Reaction transforming FlhC, FlhD into FlhD-FlhC
Type: state transition
Pathway Components: FlhC + FlhD -> FlhD-FlhC
Components:
Function Name Type Evidence Reference(s)
reactant FlhC protein nd nd
reactant FlhD protein nd nd
product FlhD-FlhC complex nd nd
flhDC_mRNA FlhC
Name: flhDC_mRNA -> FlhC
Description: Translation of FlhC
Type: translation
Pathway Components: flhDC_mRNA -> FlhC
Components:
Function Name Type Evidence Reference(s)
product FlhC protein nd nd
reactant flhDC_mRNA RNA nd nd
rcsA_mRNA RcsA
Name: rcsA_mRNA -> RcsA
Description: Translation of RcsA
Type: translation
Pathway Components: rcsA_mRNA -> RcsA
Components:
Function Name Type Evidence Reference(s)
product RcsA protein nd nd
reactant rcsA_mRNA RNA nd nd
RcsB + RcsA RcsB-RcsA
Name: RcsB + RcsA -> RcsB-RcsA
Description: Reaction transforming RcsB, RcsA into RcsB-RcsA
Type: state transition
Pathway Components: RcsB + RcsA -> RcsB-RcsA
Components:
Function Name Type Evidence Reference(s)
reactant RcsA protein nd nd
reactant RcsB protein nd nd
product RcsB-RcsA complex nd nd
yjbE_mRNA YjbE
Name: yjbE_mRNA -> YjbE
Description: Translation of YjbE
Type: translation
Pathway Components: yjbE_mRNA -> YjbE
Components:
Function Name Type Evidence Reference(s)
product YjbE protein nd nd
reactant yjbE_mRNA RNA nd nd
yjbEFGH_mRNA YjbE
Name: yjbEFGH_mRNA -> YjbE
Description: Translation of YjbE
Type: translation
Pathway Components: yjbEFGH_mRNA -> YjbE
Components:
Function Name Type Evidence Reference(s)
product YjbE protein nd nd
reactant yjbEFGH_mRNA RNA nd nd
yjbEFGH_mRNA YjbF
Name: yjbEFGH_mRNA -> YjbF
Description: Translation of YjbF
Type: translation
Pathway Components: yjbEFGH_mRNA -> YjbF
Components:
Function Name Type Evidence Reference(s)
product YjbF protein nd nd
reactant yjbEFGH_mRNA RNA nd nd
yjbEFGH_mRNA YjbG
Name: yjbEFGH_mRNA -> YjbG
Description: Translation of YjbG
Type: translation
Pathway Components: yjbEFGH_mRNA -> YjbG
Components:
Function Name Type Evidence Reference(s)
product YjbG protein nd nd
reactant yjbEFGH_mRNA RNA nd nd
yjbEFGH_mRNA YjbH
Name: yjbEFGH_mRNA -> YjbH
Description: Translation of YjbH
Type: translation
Pathway Components: yjbEFGH_mRNA -> YjbH
Components:
Function Name Type Evidence Reference(s)
product YjbH protein nd nd
reactant yjbEFGH_mRNA RNA nd nd



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