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PspF Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
PspA PspB PspC PspD PspE PspF PspG cyanide pspABCDE pspABCDE_mRNA pspF pspF_mRNA pspG pspG_mRNA sulfite thiocyanate thiosulfate PspC PspA PspB


Gensor Unit       
Name: PspF
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): biological_process GO:0043433 - negative regulation of DNA binding transcription factor activity
GO:0045892 - negative regulation of transcription, DNA-templated
GO:0009271 - phage shock
GO:0010557 - positive regulation of macromolecule biosynthetic process
GO:0045893 - positive regulation of transcription, DNA-templated
GO:0009408 - response to heat
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cellular_component GO:0060187 - cell pole
GO:0005829 - cytosol
GO:0031234 - extrinsic component of cytoplasmic side of plasma membrane
GO:0030288 - outer membrane-bounded periplasmic space
GO:0042597 - periplasmic space
GO:0005886 - plasma membrane
molecular_function GO:0003677 - DNA binding
GO:0042802 - identical protein binding
GO:0005543 - phospholipid binding
GO:0005515 - protein binding
GO:0043565 - sequence-specific DNA binding
GO:0004792 - thiosulfate sulfurtransferase activity
Components: Show/Hide Components Table (17 more...)
Function Name Type
protein PspA protein
protein PspB protein
protein PspC protein
protein PspD protein
protein PspE protein
protein PspF protein
protein PspG protein
simple_molecule cyanide simple_molecule
gene pspABCDE gene
RNA pspABCDE_mRNA RNA
gene pspF gene
RNA pspF_mRNA RNA
gene pspG gene
RNA pspG_mRNA RNA
simple_molecule sulfite simple_molecule
simple_molecule thiocyanate simple_molecule
simple_molecule thiosulfate simple_molecule


Reactions       
Showing 11 reactions
PspF pspABCDE pspABCDE_mRNA
Name: pspABCDE -> pspABCDE_mRNA
Description: Transcription of transcription unit pspABCDE. Reaction activation by PspF.
Type: transcription
Pathway Components: pspABCDE - PspF -> pspABCDE_mRNA
Components:
Function Name Type Evidence Reference(s)
activator PspF protein nd nd
reactant pspABCDE gene nd nd
product pspABCDE_mRNA RNA nd nd
PspF pspF pspF_mRNA
Name: pspF -> pspF_mRNA
Description: Transcription of transcription unit pspF. Reaction inhibition by PspF.
Type: transcription
Pathway Components: pspF - PspF -> pspF_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor PspF protein nd nd
reactant pspF gene nd nd
product pspF_mRNA RNA nd nd
PspF pspG pspG_mRNA
Name: pspG -> pspG_mRNA
Description: Transcription of transcription unit pspG. Reaction activation by PspF.
Type: transcription
Pathway Components: pspG - PspF -> pspG_mRNA
Components:
Function Name Type Evidence Reference(s)
activator PspF protein nd nd
reactant pspG gene nd nd
product pspG_mRNA RNA nd nd
pspABCDE_mRNA PspA
Name: pspABCDE_mRNA -> PspA
Description: Translation of PspA
Type: translation
Pathway Components: pspABCDE_mRNA -> PspA
Components:
Function Name Type Evidence Reference(s)
product PspA protein nd nd
reactant pspABCDE_mRNA RNA nd nd
pspABCDE_mRNA PspB
Name: pspABCDE_mRNA -> PspB
Description: Translation of PspB
Type: translation
Pathway Components: pspABCDE_mRNA -> PspB
Components:
Function Name Type Evidence Reference(s)
product PspB protein nd nd
reactant pspABCDE_mRNA RNA nd nd
pspABCDE_mRNA PspC
Name: pspABCDE_mRNA -> PspC
Description: Translation of PspC
Type: translation
Pathway Components: pspABCDE_mRNA -> PspC
Components:
Function Name Type Evidence Reference(s)
product PspC protein nd nd
reactant pspABCDE_mRNA RNA nd nd
pspABCDE_mRNA PspD
Name: pspABCDE_mRNA -> PspD
Description: Translation of PspD
Type: translation
Pathway Components: pspABCDE_mRNA -> PspD
Components:
Function Name Type Evidence Reference(s)
product PspD protein nd nd
reactant pspABCDE_mRNA RNA nd nd
pspABCDE_mRNA PspE
Name: pspABCDE_mRNA -> PspE
Description: Translation of PspE
Type: translation
Pathway Components: pspABCDE_mRNA -> PspE
Components:
Function Name Type Evidence Reference(s)
product PspE protein nd nd
reactant pspABCDE_mRNA RNA nd nd
PspE sulfite thiosulfate + cyanide thiocyanate + sulfite
Name: thiosulfate + cyanide -> thiocyanate + sulfite
Description: Reaction transforming thiosulfate, cyanide into thiocyanate, sulfite
Type: state transition
Pathway Components: thiosulfate + cyanide - PspE - sulfite -> thiocyanate + sulfite
Components:
Function Name Type Evidence Reference(s)
catalyzer PspE protein nd nd
reactant cyanide simple_molecule nd nd
inhibitor sulfite simple_molecule nd nd
product sulfite simple_molecule nd nd
product thiocyanate simple_molecule nd nd
reactant thiosulfate simple_molecule nd nd
pspG_mRNA PspG
Name: pspG_mRNA -> PspG
Description: Translation of PspG
Type: translation
Pathway Components: pspG_mRNA -> PspG
Components:
Function Name Type Evidence Reference(s)
product PspG protein nd nd
reactant pspG_mRNA RNA nd nd
pspF_mRNA PspF
Name: pspF_mRNA -> PspF
Description: Translation of PspF
Type: translation
Pathway Components: pspF_mRNA -> PspF
Components:
Function Name Type Evidence Reference(s)
product PspF protein nd nd
reactant pspF_mRNA RNA nd nd



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