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PspF Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
PspA PspB PspC PspD PspE PspF PspG cyanide pspABCDE pspABCDE_mRNA pspF pspF_mRNA pspG pspG_mRNA sulfite thiocyanate thiosulfate PspC PspA PspB


Gensor Unit       
Name: PspF
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): GO:0045892 - negative regulation of transcription, DNA-templated
GO:0016020 - membrane
GO:0042597 - periplasmic space
GO:0005737 - cytoplasm
GO:0045893 - positive regulation of transcription, DNA-templated
GO:0003677 - DNA binding
GO:0016740 - transferase activity
GO:0005886 - plasma membrane
GO:0004792 - thiosulfate sulfurtransferase activity
GO:0016021 - integral component of membrane
GO:0008134 - transcription factor binding
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Components:
Function Name Type
simple molecule thiosulfate simple molecule


Reactions       
Showing 12 reactions
pspABCDE pspABCDE_mRNA
Name: pspABCDE -> pspABCDE_mRNA
Description: Transcription of transcription unit pspABCDE; reaction activation by PspF.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant pspABCDE gene nd nd
product pspABCDE_mRNA RNA nd nd
pspF pspF_mRNA
Name: pspF -> pspF_mRNA
Description: Transcription of transcription unit pspF; reaction inhibition by PspF.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product pspF_mRNA RNA nd nd
reactant pspF gene nd nd
pspG pspG_mRNA
Name: pspG -> pspG_mRNA
Description: Transcription of transcription unit pspG; reaction activation by PspF.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant pspG gene nd nd
product pspG_mRNA RNA nd nd
pspABCDE_mRNA PspC
Name: pspABCDE_mRNA -> PspC
Description: Translation of PspC
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant pspABCDE_mRNA RNA nd nd
product PspC protein nd nd
pspABCDE_mRNA PspD
Name: pspABCDE_mRNA -> PspD
Description: Translation of PspD
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant pspABCDE_mRNA RNA nd nd
product PspD protein nd nd
pspG_mRNA PspG
Name: pspG_mRNA -> PspG
Description: Translation of PspG
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant pspG_mRNA RNA nd nd
product PspG protein nd nd
pspABCDE_mRNA PspA
Name: pspABCDE_mRNA -> PspA
Description: Translation of PspA
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant pspABCDE_mRNA RNA nd nd
product PspA protein nd nd
pspABCDE_mRNA PspE
Name: pspABCDE_mRNA -> PspE
Description: Translation of PspE
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant pspABCDE_mRNA RNA nd nd
product PspE protein nd nd
cyanide + thiosulfate thiocyanate + sulfite
Name: cyanide + thiosulfate -> thiocyanate + sulfite
Description: Reaction transforming cyanide, thiosulfate into thiocyanate, sulfite
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product sulfite simple molecule nd nd
product thiocyanate simple molecule nd nd
reactant thiosulfate simple molecule nd nd
reactant cyanide simple molecule nd nd
pspABCDE_mRNA PspB
Name: pspABCDE_mRNA -> PspB
Description: Translation of PspB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant pspABCDE_mRNA RNA nd nd
product PspB protein nd nd
pspF_mRNA PspF
Name: pspF_mRNA -> PspF
Description: Translation of PspF
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant pspF_mRNA RNA nd nd
product PspF protein nd nd
PspA + PspB + PspC PspA-PspB-PspC
Name: PspA + PspB + PspC -> PspA-PspB-PspC
Description: Reaction transforming PspA, PspB, PspC into PspA-PspB-PspC
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant PspC protein nd nd
product PspC protein nd nd
reactant PspA protein nd nd
reactant PspB protein nd nd



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