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PhoP Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
(3E,5Z)-tetradecadienoate (3E,5Z)-tetradecadienoate_Ext (Z)-2-methyl-peroxyaminoacrylate (Z)-2-methylureidoperacrylic acid peroxy aminoacrylate ureidoperacrylic acid 10-formyl-tetrahydrofolate 2-oxobutyrate ketoglutarate hydracrylic acid 3-ureidoacrylate L-alanine 5-phospho-beta-D-ribosyl-amine 5-phospho-ribosyl-glycineamide ADP-glucose AcrA AcrB AcrD AcrE AcrF ArgD BorD CysB D-glucosamine-6-phosphate DcuD EmrA EmrB EmrK EmrY EntS FMN Reduced FMN FadL GadE GadW GlgA GlgB GlgC GlgP GlgX HdeA HdeB HdeD HemL IMP IraM Re endotoxin asp L-aspartate-semialdehyde L-aspartyl-4-P cystathionine L-cysteine L-glutamate homo-ser MacA MacB MalS MdtA MdtB MdtC MdtE MdtF MetB MetL magnesium magnesium_Ext MgrB This Gensor Unit is not yet available MgtA MgtL N-acetyl-D-glucosamine-6-phosphate 2-acetamido-5-oxopentanoate acetylornithine N-Succinyl-2-L-amino-6-oxoheptanedioate L,L-SDAP NagA nickel nickel_Ext azaserine OmpT PagP PhoP PhoQ phosphate PurD PurH RstA RstB RutA RutB RutC RutD RutE RutF RutG SafA SlyB TolC TreR YbjG YdeO YdeP YgiA YgiB YgiC YhiD YneM YrbL amylose a debranched limit dextrin a drug a drug_Ext a glycerol ester glycogen a limit dextrin LCFA LCFA_Ext a macrolide antibiotic a macrolide antibiotic_Ext peptides a phospholipid Try a reduced electron acceptor acetate acrAB acrAB_mRNA alpha-D-glucose 1-phosphate aminoacrylate AICAR ammonia an oxidized electron acceptor argD argD_mRNA borD borD_mRNA carbamate cysB cysB_mRNA dcuD dcuD_mRNA UPP (ambiguous) ditrans,polycis-undecaprenyl phosphate PP enterobactin enterobactin_Ext fadL fadL_mRNA gadE gadE_mRNA This Gensor Unit is not yet available This Gensor Unit is not yet available This Gensor Unit is not yet available This Gensor Unit is not yet available glgBXCAP glgBXCAP_mRNA glutamate-1-semialdehyde glycine hdeAB-yhiD hdeAB-yhiD_mRNA hdeD hdeD_mRNA hemL hemL_mRNA hepta-acylated KDO2-lipid A iraM iraM_mRNA malS malS_mRNA malonate-S-ald maltohexaose maltotetraose metBL metBL_mRNA mgrB mgrB_mRNA mgrR mgrR_mRNA mgtLA mgtLA_mRNA This Gensor Unit is not yet available This Gensor Unit is not yet available ompT ompT_mRNA oxygen pagP pagP_mRNA phoPQ phoPQ_mRNA phosphate phosphoribosyl-formamido-carboxamide purHD purHD_mRNA rstAB rstAB_mRNA rutABCDEFG rutABCDEFG_mRNA safA-ydeO safA-ydeO_mRNA slyB slyB_mRNA succinate THF thymine tolC-ygiABC tolC-ygiABC_mRNA treR treR_mRNA uracil ybjG ybjG_mRNA ydeP ydeP_mRNA yneM yneM_mRNA yrbL yrbL_mRNA PhoP phosphate AcrA TolC AcrB AcrD AcrA TolC TolC MacB MacA TolC MdtE MdtF AcrE AcrF TolC EmrA EmrB TolC EmrK EmrY TolC EntS TolC TolC MdtC MdtB MdtA phosphate phosphate phosphate phosphate phosphate


Gensor Unit       
Name: PhoP
Classification:
Groups: GUs related to the two-component system
Gene Ontology Terms (GO): GO:0071468 - cellular response to acidic pH
GO:0031230 - intrinsic component of cell outer membrane
GO:0045892 - negative regulation of transcription, DNA-templated
GO:0050380 - undecaprenyl-diphosphatase activity
GO:0051082 - unfolded protein binding
GO:0008270 - zinc ion binding
GO:0019344 - cysteine biosynthetic process
GO:0003700 - transcription factor activity, sequence-specific DNA binding
GO:0003824 - catalytic activity
GO:0008360 - regulation of cell shape
GO:0003992 - N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
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Components:
Function Name Type
RNA yrbL_mRNA RNA


Reactions       
Showing 139 reactions
PhoP + phosphate PhoP-Phosphorylated
Name: PhoP + phosphate -> PhoP-Phosphorylated
Description: Reaction transforming PhoP, phosphate into PhoP-Phosphorylated
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant PhoP protein nd nd
product PhoP-Phosphorylated complex nd nd
reactant phosphate simple molecule nd nd
acrAB acrAB_mRNA
Name: acrAB -> acrAB_mRNA
Description: Transcription of transcription unit acrAB; reaction inhibition by AcrR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant acrAB gene nd nd
product acrAB_mRNA RNA nd nd
argD argD_mRNA
Name: argD -> argD_mRNA
Description: Transcription of transcription unit argD; reaction inhibition by ArgR-L-arginine.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant argD gene nd nd
product argD_mRNA RNA nd nd
borD borD_mRNA
Name: borD -> borD_mRNA
Description: Transcription of transcription unit borD; reaction activation by PhoP-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant borD gene nd nd
product borD_mRNA RNA nd nd
cysB cysB_mRNA
Name: cysB -> cysB_mRNA
Description: Transcription of transcription unit cysB; reaction inhibition by CysB-acetylserine.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product cysB_mRNA RNA nd nd
reactant cysB gene nd nd
dcuD dcuD_mRNA
Name: dcuD -> dcuD_mRNA
Description: Transcription of transcription unit dcuD; reaction inhibition by PhoP-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product dcuD_mRNA RNA nd nd
reactant dcuD gene nd nd
fadL fadL_mRNA
Name: fadL -> fadL_mRNA
Description: Transcription of transcription unit fadL; reaction inhibition by FadR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product fadL_mRNA RNA nd nd
reactant fadL gene nd nd
gadE gadE_mRNA
Name: gadE -> gadE_mRNA
Description: Transcription of transcription unit gadE; reaction activation by GadE.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant gadE gene nd nd
product gadE_mRNA RNA nd nd
gadW gadW_mRNA
Name: gadW -> gadW_mRNA
Description: Transcription of transcription unit gadW; reaction inhibition by GadW.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant gadW gene nd nd
product gadW_mRNA RNA nd nd
glgAP glgAP_mRNA
Name: glgAP -> glgAP_mRNA
Description: Transcription of transcription unit glgAP; reaction activation by PhoP-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant glgAP gene nd nd
product glgAP_mRNA RNA nd nd
glgBXCAP glgBXCAP_mRNA
Name: glgBXCAP -> glgBXCAP_mRNA
Description: Transcription of transcription unit glgBXCAP; reaction activation by PhoP-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant glgBXCAP gene nd nd
product glgBXCAP_mRNA RNA nd nd
hdeAB-yhiD hdeAB-yhiD_mRNA
Name: hdeAB-yhiD -> hdeAB-yhiD_mRNA
Description: Transcription of transcription unit hdeAB-yhiD; reaction inhibition by FliZ.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product hdeAB-yhiD_mRNA RNA nd nd
reactant hdeAB-yhiD gene nd nd
hdeD hdeD_mRNA
Name: hdeD -> hdeD_mRNA
Description: Transcription of transcription unit hdeD; reaction activation by GadE.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant hdeD gene nd nd
product hdeD_mRNA RNA nd nd
hemL hemL_mRNA
Name: hemL -> hemL_mRNA
Description: Transcription of transcription unit hemL; reaction inhibition by PdhR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product hemL_mRNA RNA nd nd
reactant hemL gene nd nd
iraM iraM_mRNA
Name: iraM -> iraM_mRNA
Description: Transcription of transcription unit iraM; reaction activation by PhoP-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant iraM gene nd nd
product iraM_mRNA RNA nd nd
malS malS_mRNA
Name: malS -> malS_mRNA
Description: Transcription of transcription unit malS; reaction activation by MalT-maltotriose.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product malS_mRNA RNA nd nd
reactant malS gene nd nd
metBL metBL_mRNA
Name: metBL -> metBL_mRNA
Description: Transcription of transcription unit metBL; reaction activation by HypT-Met-oxidized.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product metBL_mRNA RNA nd nd
reactant metBL gene nd nd
mgrB mgrB_mRNA
Name: mgrB -> mgrB_mRNA
Description: Transcription of transcription unit mgrB; reaction activation by PhoP-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product mgrB_mRNA RNA nd nd
reactant mgrB gene nd nd
mgrR mgrR_mRNA
Name: mgrR -> mgrR_mRNA
Description: Transcription of transcription unit mgrR; reaction activation by PhoP-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product mgrR_mRNA RNA nd nd
reactant mgrR gene nd nd
mgtLA mgtLA_mRNA
Name: mgtLA -> mgtLA_mRNA
Description: Transcription of transcription unit mgtLA; reaction activation by PhoP-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant mgtLA gene nd nd
product mgtLA_mRNA RNA nd nd
nagA nagA_mRNA
Name: nagA -> nagA_mRNA
Description: Transcription of transcription unit nagA; reaction activation by PhoP-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant nagA gene nd nd
product nagA_mRNA RNA nd nd
ompT ompT_mRNA
Name: ompT -> ompT_mRNA
Description: Transcription of transcription unit ompT; reaction activation by PhoP-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product ompT_mRNA RNA nd nd
reactant ompT gene nd nd
pagP pagP_mRNA
Name: pagP -> pagP_mRNA
Description: Transcription of transcription unit pagP; reaction activation by PhoP-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant pagP gene nd nd
product pagP_mRNA RNA nd nd
phoPQ phoPQ_mRNA
Name: phoPQ -> phoPQ_mRNA
Description: Transcription of transcription unit phoPQ; reaction inhibition by PhoP-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product phoPQ_mRNA RNA nd nd
reactant phoPQ gene nd nd
purHD purHD_mRNA
Name: purHD -> purHD_mRNA
Description: Transcription of transcription unit purHD; reaction activation by PhoP-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant purHD gene nd nd
product purHD_mRNA RNA nd nd
rstAB rstAB_mRNA
Name: rstAB -> rstAB_mRNA
Description: Transcription of transcription unit rstAB; reaction activation by PhoP-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant rstAB gene nd nd
product rstAB_mRNA RNA nd nd
rutABCDEFG rutABCDEFG_mRNA
Name: rutABCDEFG -> rutABCDEFG_mRNA
Description: Transcription of transcription unit rutABCDEFG; reaction activation by NtrC-phosphate.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product rutABCDEFG_mRNA RNA nd nd
reactant rutABCDEFG gene nd nd
safA-ydeO safA-ydeO_mRNA
Name: safA-ydeO -> safA-ydeO_mRNA
Description: Transcription of transcription unit safA-ydeO; reaction activation by EvgA-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant safA-ydeO gene nd nd
product safA-ydeO_mRNA RNA nd nd
slyB slyB_mRNA
Name: slyB -> slyB_mRNA
Description: Transcription of transcription unit slyB; reaction inhibition by PhoP-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant slyB gene nd nd
product slyB_mRNA RNA nd nd
tolC-ygiABC tolC-ygiABC_mRNA
Name: tolC-ygiABC -> tolC-ygiABC_mRNA
Description: Transcription of transcription unit tolC-ygiABC; reaction activation by MarA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant tolC-ygiABC gene nd nd
product tolC-ygiABC_mRNA RNA nd nd
treR treR_mRNA
Name: treR -> treR_mRNA
Description: Transcription of transcription unit treR; reaction inhibition by PhoP-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant treR gene nd nd
product treR_mRNA RNA nd nd
ybjG ybjG_mRNA
Name: ybjG -> ybjG_mRNA
Description: Transcription of transcription unit ybjG; reaction activation by PhoP-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product ybjG_mRNA RNA nd nd
reactant ybjG gene nd nd
ydeP ydeP_mRNA
Name: ydeP -> ydeP_mRNA
Description: Transcription of transcription unit ydeP; reaction activation by EvgA-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product ydeP_mRNA RNA nd nd
reactant ydeP gene nd nd
yneM yneM_mRNA
Name: yneM -> yneM_mRNA
Description: Transcription of transcription unit yneM; reaction activation by PhoP-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product yneM_mRNA RNA nd nd
reactant yneM gene nd nd
yrbL yrbL_mRNA
Name: yrbL -> yrbL_mRNA
Description: Transcription of transcription unit yrbL; reaction inhibition by BasR-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant yrbL gene nd nd
product yrbL_mRNA RNA nd nd
glgBXCAP_mRNA GlgA
Name: glgBXCAP_mRNA -> GlgA
Description: Translation of GlgA
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant glgBXCAP_mRNA RNA nd nd
product GlgA protein nd nd
ADP-glucose amylose
Name: ADP-glucose -> amylose
Description: Reaction transforming ADP-glucose into amylose
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant ADP-glucose simple molecule nd nd
product amylose simple molecule nd nd
purHD_mRNA PurD
Name: purHD_mRNA -> PurD
Description: Translation of PurD
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant purHD_mRNA RNA nd nd
product PurD protein nd nd
5-phospho-beta-D-ribosyl-amine + glycine phosphate + 5-phospho-ribosyl-glycineamide
Name: 5-phospho-beta-D-ribosyl-amine + glycine -> phosphate + 5-phospho-ribosyl-glycineamide
Description: Reaction transforming 5-phospho-beta-D-ribosyl-amine, glycine into phosphate, 5-phospho-ribosyl-glycineamide
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant 5-phospho-beta-D-ribosyl-amine simple molecule nd nd
product 5-phospho-ribosyl-glycineamide simple molecule nd nd
reactant glycine simple molecule nd nd
product phosphate simple molecule nd nd
acrAB_mRNA AcrA
Name: acrAB_mRNA -> AcrA
Description: Translation of AcrA
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant acrAB_mRNA RNA nd nd
product AcrA protein nd nd
AcrA + TolC + AcrB AcrA-TolC-AcrB
Name: AcrA + TolC + AcrB -> AcrA-TolC-AcrB
Description: Reaction transforming AcrA, TolC, AcrB into AcrA-TolC-AcrB
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product AcrA-TolC-AcrB complex nd nd
reactant AcrB protein nd nd
reactant AcrA protein nd nd
reactant TolC protein nd nd
a drug_Ext a drug
Name: a drug_Ext -> a drug
Description: Transport of a drug_Ext through a bacterial membrane, leading to the presence of a drug inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant a drug_Ext simple molecule nd nd
product a drug simple molecule nd nd
AcrD + AcrA + TolC AcrD-AcrA-TolC
Name: AcrD + AcrA + TolC -> AcrD-AcrA-TolC
Description: Reaction transforming AcrD, AcrA, TolC into AcrD-AcrA-TolC
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant AcrA protein nd nd
reactant TolC protein nd nd
reactant AcrD protein nd nd
product AcrD-AcrA-TolC complex nd nd
slyB_mRNA SlyB
Name: slyB_mRNA -> SlyB
Description: Translation of SlyB
Type: translation
Components:
Function Name Type Evidence Reference(s)
product SlyB protein nd nd
reactant slyB_mRNA RNA nd nd
gadE_mRNA GadE
Name: gadE_mRNA -> GadE
Description: Translation of GadE
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant gadE_mRNA RNA nd nd
product GadE protein nd nd
malS_mRNA MalS
Name: malS_mRNA -> MalS
Description: Translation of MalS
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant malS_mRNA RNA nd nd
product MalS protein nd nd
amylose maltohexaose
Name: amylose -> maltohexaose
Description: Reaction transforming amylose into maltohexaose
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product maltohexaose simple molecule nd nd
reactant amylose simple molecule nd nd
pagP_mRNA PagP
Name: pagP_mRNA -> PagP
Description: Translation of PagP
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant pagP_mRNA RNA nd nd
product PagP protein nd nd
a phospholipid + Re endotoxin a glycerol ester + hepta-acylated KDO2-lipid A
Name: a phospholipid + Re endotoxin -> a glycerol ester + hepta-acylated KDO2-lipid A
Description: Reaction transforming a phospholipid, Re endotoxin into a glycerol ester, hepta-acylated KDO2-lipid A
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant a phospholipid simple molecule nd nd
product hepta-acylated KDO2-lipid A simple molecule nd nd
product a glycerol ester simple molecule nd nd
reactant Re endotoxin simple molecule nd nd
rstAB_mRNA RstB
Name: rstAB_mRNA -> RstB
Description: Translation of RstB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant rstAB_mRNA RNA nd nd
product RstB protein nd nd
tolC-ygiABC_mRNA TolC
Name: tolC-ygiABC_mRNA -> TolC
Description: Translation of TolC
Type: translation
Components:
Function Name Type Evidence Reference(s)
product TolC protein nd nd
reactant tolC-ygiABC_mRNA RNA nd nd
TolC + MacB + MacA TolC-MacB-MacA
Name: TolC + MacB + MacA -> TolC-MacB-MacA
Description: Reaction transforming TolC, MacB, MacA into TolC-MacB-MacA
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant MacA protein nd nd
reactant MacB protein nd nd
product TolC-MacB-MacA complex nd nd
reactant TolC protein nd nd
a macrolide antibiotic_Ext a macrolide antibiotic + phosphate
Name: a macrolide antibiotic_Ext -> a macrolide antibiotic + phosphate
Description: Transport of a macrolide antibiotic_Ext through a bacterial membrane, leading to the presence of a macrolide antibiotic, phosphate inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product phosphate simple molecule nd nd
product a macrolide antibiotic simple molecule nd nd
reactant a macrolide antibiotic_Ext simple molecule nd nd
TolC + MdtE + MdtF TolC-MdtE-MdtF
Name: TolC + MdtE + MdtF -> TolC-MdtE-MdtF
Description: Reaction transforming TolC, MdtE, MdtF into TolC-MdtE-MdtF
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product TolC-MdtE-MdtF complex nd nd
reactant MdtF protein nd nd
reactant TolC protein nd nd
reactant MdtE protein nd nd
AcrE + AcrF + TolC AcrE-AcrF-TolC
Name: AcrE + AcrF + TolC -> AcrE-AcrF-TolC
Description: Reaction transforming AcrE, AcrF, TolC into AcrE-AcrF-TolC
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product AcrE-AcrF-TolC complex nd nd
reactant AcrE protein nd nd
reactant TolC protein nd nd
reactant AcrF protein nd nd
EmrA + EmrB + TolC EmrA-EmrB-TolC
Name: EmrA + EmrB + TolC -> EmrA-EmrB-TolC
Description: Reaction transforming EmrA, EmrB, TolC into EmrA-EmrB-TolC
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant EmrB protein nd nd
product EmrA-EmrB-TolC complex nd nd
reactant TolC protein nd nd
reactant EmrA protein nd nd
EmrK + EmrY + TolC EmrK-EmrY-TolC
Name: EmrK + EmrY + TolC -> EmrK-EmrY-TolC
Description: Reaction transforming EmrK, EmrY, TolC into EmrK-EmrY-TolC
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product EmrK-EmrY-TolC complex nd nd
reactant EmrY protein nd nd
reactant EmrK protein nd nd
reactant TolC protein nd nd
EntS + TolC EntS-TolC
Name: EntS + TolC -> EntS-TolC
Description: Reaction transforming EntS, TolC into EntS-TolC
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant TolC protein nd nd
reactant EntS protein nd nd
product EntS-TolC complex nd nd
enterobactin_Ext enterobactin
Name: enterobactin_Ext -> enterobactin
Description: Transport of enterobactin_Ext through a bacterial membrane, leading to the presence of enterobactin inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant enterobactin_Ext simple molecule nd nd
product enterobactin simple molecule nd nd
TolC + MdtC + MdtB + MdtA TolC-MdtC-MdtB-MdtA
Name: TolC + MdtC + MdtB + MdtA -> TolC-MdtC-MdtB-MdtA
Description: Reaction transforming TolC, MdtC, MdtB, MdtA into TolC-MdtC-MdtB-MdtA
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant MdtB protein nd nd
reactant TolC protein nd nd
product TolC-MdtC-MdtB-MdtA complex nd nd
reactant MdtC protein nd nd
reactant MdtA protein nd nd
ybjG_mRNA YbjG
Name: ybjG_mRNA -> YbjG
Description: Translation of YbjG
Type: translation
Components:
Function Name Type Evidence Reference(s)
product YbjG protein nd nd
reactant ybjG_mRNA RNA nd nd
UPP (ambiguous) ditrans,polycis-undecaprenyl phosphate + phosphate
Name: UPP (ambiguous) -> ditrans,polycis-undecaprenyl phosphate + phosphate
Description: Reaction transforming UPP (ambiguous) into ditrans,polycis-undecaprenyl phosphate, phosphate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant UPP (ambiguous) simple molecule nd nd
product phosphate simple molecule nd nd
product ditrans,polycis-undecaprenyl phosphate simple molecule nd nd
yrbL_mRNA YrbL
Name: yrbL_mRNA -> YrbL
Description: Translation of YrbL
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant yrbL_mRNA RNA nd nd
product YrbL protein nd nd
ydeP_mRNA YdeP
Name: ydeP_mRNA -> YdeP
Description: Translation of YdeP
Type: translation
Components:
Function Name Type Evidence Reference(s)
product YdeP protein nd nd
reactant ydeP_mRNA RNA nd nd
rutABCDEFG_mRNA RutG
Name: rutABCDEFG_mRNA -> RutG
Description: Translation of RutG
Type: translation
Components:
Function Name Type Evidence Reference(s)
product RutG protein nd nd
reactant rutABCDEFG_mRNA RNA nd nd
cysB_mRNA CysB
Name: cysB_mRNA -> CysB
Description: Translation of CysB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant cysB_mRNA RNA nd nd
product CysB protein nd nd
purHD_mRNA PurH
Name: purHD_mRNA -> PurH
Description: Translation of PurH
Type: translation
Components:
Function Name Type Evidence Reference(s)
product PurH protein nd nd
reactant purHD_mRNA RNA nd nd
10-formyl-tetrahydrofolate + AICAR THF + phosphoribosyl-formamido-carboxamide
Name: 10-formyl-tetrahydrofolate + AICAR -> THF + phosphoribosyl-formamido-carboxamide
Description: Reaction transforming 10-formyl-tetrahydrofolate, AICAR into THF, phosphoribosyl-formamido-carboxamide
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product phosphoribosyl-formamido-carboxamide simple molecule nd nd
reactant AICAR simple molecule nd nd
reactant 10-formyl-tetrahydrofolate simple molecule nd nd
product THF simple molecule nd nd
IMP phosphoribosyl-formamido-carboxamide
Name: IMP -> phosphoribosyl-formamido-carboxamide
Description: Reaction transforming IMP into phosphoribosyl-formamido-carboxamide
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product phosphoribosyl-formamido-carboxamide simple molecule nd nd
reactant IMP simple molecule nd nd
ompT_mRNA OmpT
Name: ompT_mRNA -> OmpT
Description: Translation of OmpT
Type: translation
Components:
Function Name Type Evidence Reference(s)
product OmpT protein nd nd
reactant ompT_mRNA RNA nd nd
a protein peptides + peptides
Name: a protein -> peptides + peptides
Description: Reaction transforming a protein into peptides, peptides
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant a protein simple molecule nd nd
product peptides simple molecule nd nd
safA-ydeO_mRNA SafA
Name: safA-ydeO_mRNA -> SafA
Description: Translation of SafA
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant safA-ydeO_mRNA RNA nd nd
product SafA protein nd nd
acrAB_mRNA AcrB
Name: acrAB_mRNA -> AcrB
Description: Translation of AcrB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant acrAB_mRNA RNA nd nd
product AcrB protein nd nd
iraM_mRNA IraM
Name: iraM_mRNA -> IraM
Description: Translation of IraM
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant iraM_mRNA RNA nd nd
product IraM protein nd nd
argD_mRNA ArgD
Name: argD_mRNA -> ArgD
Description: Translation of ArgD
Type: translation