RegulonDB RegulonDB

PgrR Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
L-Ala-gamma-D-Glu-Dap L-Ala-D-Glu MpaA PgrR YcjY YmjC YmjD M-DAP ycjY ycjY-ymjDC-mpaA ycjY-ymjDC-mpaA_mRNA ycjY_mRNA


Gensor Unit       
Name: PgrR
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): GO:0004181 - metallocarboxypeptidase activity
GO:0008270 - zinc ion binding
GO:0005737 - cytoplasm
GO:0061473 - murein tripeptide carboxypeptidase activity
GO:0051301 - cell division
GO:0006508 - proteolysis
GO:0004040 - amidase activity
GO:0009050 - glycopeptide catabolic process
GO:0009253 - peptidoglycan catabolic process
Components:
Function Name Type
RNA ycjY_mRNA RNA


Reactions       
Showing 7 reactions
ycjY ycjY_mRNA
Name: ycjY -> ycjY_mRNA
Description: Transcription of transcription unit ycjY; reaction inhibition by PgrR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product ycjY_mRNA RNA nd nd
reactant ycjY gene nd nd
ycjY-ymjDC-mpaA ycjY-ymjDC-mpaA_mRNA
Name: ycjY-ymjDC-mpaA -> ycjY-ymjDC-mpaA_mRNA
Description: Transcription of transcription unit ycjY-ymjDC-mpaA; reaction inhibition by PgrR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product ycjY-ymjDC-mpaA_mRNA RNA nd nd
reactant ycjY-ymjDC-mpaA gene nd nd
ycjY-ymjDC-mpaA_mRNA YmjD
Name: ycjY-ymjDC-mpaA_mRNA -> YmjD
Description: Translation of YmjD
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant ycjY-ymjDC-mpaA_mRNA RNA nd nd
product YmjD protein nd nd
ycjY-ymjDC-mpaA_mRNA MpaA
Name: ycjY-ymjDC-mpaA_mRNA -> MpaA
Description: Translation of MpaA
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant ycjY-ymjDC-mpaA_mRNA RNA nd nd
product MpaA protein nd nd
L-Ala-gamma-D-Glu-Dap L-Ala-D-Glu + M-DAP
Name: L-Ala-gamma-D-Glu-Dap -> L-Ala-D-Glu + M-DAP
Description: Reaction transforming L-Ala-gamma-D-Glu-Dap into L-Ala-D-Glu, M-DAP
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product L-Ala-D-Glu simple molecule nd nd
product M-DAP simple molecule nd nd
reactant L-Ala-gamma-D-Glu-Dap simple molecule nd nd
ycjY-ymjDC-mpaA_mRNA YmjC
Name: ycjY-ymjDC-mpaA_mRNA -> YmjC
Description: Translation of YmjC
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant ycjY-ymjDC-mpaA_mRNA RNA nd nd
product YmjC protein nd nd
ycjY-ymjDC-mpaA_mRNA YcjY
Name: ycjY-ymjDC-mpaA_mRNA -> YcjY
Description: Translation of YcjY
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant ycjY-ymjDC-mpaA_mRNA RNA nd nd
product YcjY protein nd nd



RegulonDB