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OxyR Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
KDG 3-sulfinoalanine AhpC AhpF fructuronate fructuronate_Ext D-gluconate D-gluconate_Ext mannonate Dps DsbG Fe+2 Fe+2_Ext FhuF Flu Fur GntP Gor GrxA Hcp Hcr HemH KatG L-alanine L-cysteine L-glutamate Mn(II) Mn(II)_Ext MntH NfsA OxyR This Gensor Unit is not yet available RimK S-sulfanyl-[acceptor] SufA SufB SufC SufD SufE SufS TrxC Uof UxuA UxuB YbjC YbjN YchF YhjA a [protein] alpha-L-glu-alpha-L-glu a [protein] alpha-L-glutamate a protein with correct disulfide bonds a protein with incorrect disulfide bonds protein with oxidized disulfide bonds protein with reduced SH groups a reduced electron acceptor a reduced nitroaromatic compound a sulfur acceptor ahpCF ahpCF_mRNA ammonia an L-cysteine desulfurase an [L-cysteine desulfurase]-S-sulfanyl-L-cysteine ROH ROOH an oxidized electron acceptor an oxidized nitroaromatic compound dps dps_mRNA dsbG dsbG_mRNA fhuF fhuF_mRNA flu flu_mRNA GSH GSSG gntP gntP_mRNA gor gor_mRNA grxA grxA_mRNA hcp-hcr hcp-hcr_mRNA hemH hemH_mRNA perhydrol NH2OH katG katG_mRNA mntH mntH_mRNA oxyR oxyR_mRNA oxyS oxyS_mRNA oxygen phosphate protoheme IX protoporphyrin selenide selenocysteine sufABCDSE sufABCDSE_mRNA sulfite trxC trxC_mRNA uof-fur uof-fur_mRNA uxuAB uxuAB_mRNA ybjC-nfsA-rimK-ybjN ybjC-nfsA-rimK-ybjN_mRNA ychF ychF_mRNA yhjA yhjA_mRNA |Ox-Hybrid-Cluster-Proteins| |Red-Hybrid-Cluster-Proteins| AhpC AhpF L-cysteine


Gensor Unit       
Name: OxyR
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): GO:0019594 - mannitol metabolic process
GO:0008785 - alkyl hydroperoxide reductase activity
GO:0000986 - bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding
GO:0033214 - iron assimilation by chelation and transport
GO:0032843 - hydroperoxide reductase activity
GO:0010181 - FMN binding
GO:0004325 - ferrochelatase activity
GO:0050662 - coenzyme binding
GO:0008270 - zinc ion binding
GO:0015691 - cadmium ion transport
GO:0003700 - transcription factor activity, sequence-specific DNA binding
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Components:
Function Name Type
simple molecule |Red-Hybrid-Cluster-Proteins| simple molecule


Reactions       
Showing 77 reactions
ahpCF ahpCF_mRNA
Name: ahpCF -> ahpCF_mRNA
Description: Transcription of transcription unit ahpCF; reaction inhibition by MetJ-S-adenosyl-L-methionine.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product ahpCF_mRNA RNA nd nd
reactant ahpCF gene nd nd
dps dps_mRNA
Name: dps -> dps_mRNA
Description: Transcription of transcription unit dps; reaction inhibition by MntR-Mn(II).
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product dps_mRNA RNA nd nd
reactant dps gene nd nd
dsbG dsbG_mRNA
Name: dsbG -> dsbG_mRNA
Description: Transcription of transcription unit dsbG; reaction activation by OxyR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product dsbG_mRNA RNA nd nd
reactant dsbG gene nd nd
fhuF fhuF_mRNA
Name: fhuF -> fhuF_mRNA
Description: Transcription of transcription unit fhuF; reaction inhibition by Fur-Fe(II).
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant fhuF gene nd nd
product fhuF_mRNA RNA nd nd
flu flu_mRNA
Name: flu -> flu_mRNA
Description: Transcription of transcription unit flu; reaction inhibition by OxyR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product flu_mRNA RNA nd nd
reactant flu gene nd nd
gntP gntP_mRNA
Name: gntP -> gntP_mRNA
Description: Transcription of transcription unit gntP; reaction inhibition by OxyR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant gntP gene nd nd
product gntP_mRNA RNA nd nd
gor gor_mRNA
Name: gor -> gor_mRNA
Description: Transcription of transcription unit gor; reaction activation by OxyR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product gor_mRNA RNA nd nd
reactant gor gene nd nd
grxA grxA_mRNA
Name: grxA -> grxA_mRNA
Description: Transcription of transcription unit grxA; reaction activation by OxyR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant grxA gene nd nd
product grxA_mRNA RNA nd nd
hcp-hcr hcp-hcr_mRNA
Name: hcp-hcr -> hcp-hcr_mRNA
Description: Transcription of transcription unit hcp-hcr; reaction activation by NarL-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product hcp-hcr_mRNA RNA nd nd
reactant hcp-hcr gene nd nd
hemH hemH_mRNA
Name: hemH -> hemH_mRNA
Description: Transcription of transcription unit hemH; reaction activation by OxyR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product hemH_mRNA RNA nd nd
reactant hemH gene nd nd
katG katG_mRNA
Name: katG -> katG_mRNA
Description: Transcription of transcription unit katG; reaction activation by Fur-Fe(II).
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product katG_mRNA RNA nd nd
reactant katG gene nd nd
mntH mntH_mRNA
Name: mntH -> mntH_mRNA
Description: Transcription of transcription unit mntH; reaction inhibition by Fur-Fe(II).
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant mntH gene nd nd
product mntH_mRNA RNA nd nd
oxyR oxyR_mRNA
Name: oxyR -> oxyR_mRNA
Description: Transcription of transcription unit oxyR; reaction inhibition by OxyR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product oxyR_mRNA RNA nd nd
reactant oxyR gene nd nd
oxyS oxyS_mRNA
Name: oxyS -> oxyS_mRNA
Description: Transcription of transcription unit oxyS; reaction activation by OxyR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product oxyS_mRNA RNA nd nd
reactant oxyS gene nd nd
sufABCDSE sufABCDSE_mRNA
Name: sufABCDSE -> sufABCDSE_mRNA
Description: Transcription of transcription unit sufABCDSE; reaction inhibition by Fur-Fe(II).
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant sufABCDSE gene nd nd
product sufABCDSE_mRNA RNA nd nd
trxC trxC_mRNA
Name: trxC -> trxC_mRNA
Description: Transcription of transcription unit trxC; reaction activation by OxyR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product trxC_mRNA RNA nd nd
reactant trxC gene nd nd
uof-fur uof-fur_mRNA
Name: uof-fur -> uof-fur_mRNA
Description: Transcription of transcription unit uof-fur; reaction activation by OxyR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant uof-fur gene nd nd
product uof-fur_mRNA RNA nd nd
uxuAB uxuAB_mRNA
Name: uxuAB -> uxuAB_mRNA
Description: Transcription of transcription unit uxuAB; reaction inhibition by ExuR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product uxuAB_mRNA RNA nd nd
reactant uxuAB gene nd nd
ybjC-nfsA-rimK-ybjN ybjC-nfsA-rimK-ybjN_mRNA
Name: ybjC-nfsA-rimK-ybjN -> ybjC-nfsA-rimK-ybjN_mRNA
Description: Transcription of transcription unit ybjC-nfsA-rimK-ybjN; reaction activation by MarA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant ybjC-nfsA-rimK-ybjN gene nd nd
product ybjC-nfsA-rimK-ybjN_mRNA RNA nd nd
ychF ychF_mRNA
Name: ychF -> ychF_mRNA
Description: Transcription of transcription unit ychF; reaction inhibition by OxyR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product ychF_mRNA RNA nd nd
reactant ychF gene nd nd
yhjA yhjA_mRNA
Name: yhjA -> yhjA_mRNA
Description: Transcription of transcription unit yhjA; reaction activation by OxyR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product yhjA_mRNA RNA nd nd
reactant yhjA gene nd nd
uxuAB_mRNA UxuA
Name: uxuAB_mRNA -> UxuA
Description: Translation of UxuA
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant uxuAB_mRNA RNA nd nd
product UxuA protein nd nd
mannonate KDG
Name: mannonate -> KDG
Description: Reaction transforming mannonate into KDG
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product KDG simple molecule nd nd
reactant mannonate simple molecule nd nd
gor_mRNA Gor
Name: gor_mRNA -> Gor
Description: Translation of Gor
Type: translation
Components:
Function Name Type Evidence Reference(s)
product Gor protein nd nd
reactant gor_mRNA RNA nd nd
GSH GSSG
Name: GSH -> GSSG
Description: Reaction transforming GSH into GSSG
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant GSH simple molecule nd nd
product GSSG simple molecule nd nd
uxuAB_mRNA UxuB
Name: uxuAB_mRNA -> UxuB
Description: Translation of UxuB
Type: translation
Components:
Function Name Type Evidence Reference(s)
product UxuB protein nd nd
reactant uxuAB_mRNA RNA nd nd
mannonate fructuronate
Name: mannonate -> fructuronate
Description: Reaction transforming mannonate into fructuronate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant mannonate simple molecule nd nd
product fructuronate simple molecule nd nd
hcp-hcr_mRNA Hcr
Name: hcp-hcr_mRNA -> Hcr
Description: Translation of Hcr
Type: translation
Components:
Function Name Type Evidence Reference(s)
product Hcr protein nd nd
reactant hcp-hcr_mRNA RNA nd nd
|Ox-Hybrid-Cluster-Proteins| |Red-Hybrid-Cluster-Proteins|
Name: |Ox-Hybrid-Cluster-Proteins| -> |Red-Hybrid-Cluster-Proteins|
Description: Reaction transforming |Ox-Hybrid-Cluster-Proteins| into |Red-Hybrid-Cluster-Proteins|
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product |Red-Hybrid-Cluster-Proteins| simple molecule nd nd
reactant |Ox-Hybrid-Cluster-Proteins| simple molecule nd nd
sufABCDSE_mRNA SufE
Name: sufABCDSE_mRNA -> SufE
Description: Translation of SufE
Type: translation
Components:
Function Name Type Evidence Reference(s)
product SufE protein nd nd
reactant sufABCDSE_mRNA RNA nd nd
ybjC-nfsA-rimK-ybjN_mRNA NfsA
Name: ybjC-nfsA-rimK-ybjN_mRNA -> NfsA
Description: Translation of NfsA
Type: translation
Components:
Function Name Type Evidence Reference(s)
product NfsA protein nd nd
reactant ybjC-nfsA-rimK-ybjN_mRNA RNA nd nd
an oxidized nitroaromatic compound a reduced nitroaromatic compound
Name: an oxidized nitroaromatic compound -> a reduced nitroaromatic compound
Description: Reaction transforming an oxidized nitroaromatic compound into a reduced nitroaromatic compound
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant an oxidized nitroaromatic compound simple molecule nd nd
product a reduced nitroaromatic compound simple molecule nd nd
dps_mRNA Dps
Name: dps_mRNA -> Dps
Description: Translation of Dps
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant dps_mRNA RNA nd nd
product Dps protein nd nd
flu_mRNA Flu
Name: flu_mRNA -> Flu
Description: Translation of Flu
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant flu_mRNA RNA nd nd
product Flu protein nd nd
ychF_mRNA YchF
Name: ychF_mRNA -> YchF
Description: Translation of YchF
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant ychF_mRNA RNA nd nd
product YchF protein nd nd
katG_mRNA KatG
Name: katG_mRNA -> KatG
Description: Translation of KatG
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant katG_mRNA RNA nd nd
product KatG protein nd nd
perhydrol oxygen
Name: perhydrol -> oxygen
Description: Reaction transforming perhydrol into oxygen
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant perhydrol simple molecule nd nd
product oxygen simple molecule nd nd
a reduced electron acceptor + perhydrol an oxidized electron acceptor
Name: a reduced electron acceptor + perhydrol -> an oxidized electron acceptor
Description: Reaction transforming a reduced electron acceptor, perhydrol into an oxidized electron acceptor
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant a reduced electron acceptor simple molecule nd nd
reactant perhydrol simple molecule nd nd
product an oxidized electron acceptor simple molecule nd nd
uof-fur_mRNA Fur
Name: uof-fur_mRNA -> Fur
Description: Translation of Fur
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant uof-fur_mRNA RNA nd nd
product Fur protein nd nd
sufABCDSE_mRNA SufD
Name: sufABCDSE_mRNA -> SufD
Description: Translation of SufD
Type: translation
Components:
Function Name Type Evidence Reference(s)
product SufD protein nd nd
reactant sufABCDSE_mRNA RNA nd nd
ybjC-nfsA-rimK-ybjN_mRNA YbjN
Name: ybjC-nfsA-rimK-ybjN_mRNA -> YbjN
Description: Translation of YbjN
Type: translation
Components:
Function Name Type Evidence Reference(s)
product YbjN protein nd nd
reactant ybjC-nfsA-rimK-ybjN_mRNA RNA nd nd
sufABCDSE_mRNA SufS
Name: sufABCDSE_mRNA -> SufS
Description: Translation of SufS
Type: translation
Components:
Function Name Type Evidence Reference(s)
product SufS protein nd nd
reactant sufABCDSE_mRNA RNA nd nd
L-cysteine + a sulfur acceptor ala + S-sulfanyl-[acceptor]
Name: L-cysteine + a sulfur acceptor -> ala + S-sulfanyl-[acceptor]
Description: Reaction transforming L-cysteine, a sulfur acceptor into ala, S-sulfanyl-[acceptor]
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant L-cysteine simple molecule nd nd
product S-sulfanyl-[acceptor] simple molecule nd nd
reactant a sulfur acceptor simple molecule nd nd
product ala simple molecule nd nd
an L-cysteine desulfurase + L-cysteine an [L-cysteine desulfurase]-S-sulfanyl-L-cysteine + ala
Name: an L-cysteine desulfurase + L-cysteine -> an [L-cysteine desulfurase]-S-sulfanyl-L-cysteine + ala
Description: Reaction transforming an L-cysteine desulfurase, L-cysteine into an [L-cysteine desulfurase]-S-sulfanyl-L-cysteine, ala
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant L-cysteine simple molecule nd nd
product an [L-cysteine desulfurase]-S-sulfanyl-L-cysteine simple molecule nd nd
reactant an L-cysteine desulfurase simple molecule nd nd
product ala simple molecule nd nd
an [L-cysteine desulfurase]-S-sulfanyl-L-cysteine + a sulfur acceptor an L-cysteine desulfurase + S-sulfanyl-[acceptor]
Name: an [L-cysteine desulfurase]-S-sulfanyl-L-cysteine + a sulfur acceptor -> an L-cysteine desulfurase + S-sulfanyl-[acceptor]
Description: Reaction transforming an [L-cysteine desulfurase]-S-sulfanyl-L-cysteine, a sulfur acceptor into an L-cysteine desulfurase, S-sulfanyl-[acceptor]
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product an L-cysteine desulfurase simple molecule nd nd
reactant a sulfur acceptor simple molecule nd nd
reactant an [L-cysteine desulfurase]-S-sulfanyl-L-cysteine simple molecule nd nd
product S-sulfanyl-[acceptor] simple molecule nd nd
3-sulfinoalanine ala + sulfite
Name: 3-sulfinoalanine -> ala + sulfite
Description: Reaction transforming 3-sulfinoalanine into ala, sulfite
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product ala simple molecule nd nd
reactant 3-sulfinoalanine simple molecule nd nd
product sulfite simple molecule nd nd
a reduced electron acceptor + selenocysteine ala + selenide + an oxidized electron acceptor
Name: a reduced electron acceptor + selenocysteine -> ala + selenide + an oxidized electron acceptor
Description: Reaction transforming a reduced electron acceptor, selenocysteine into ala, selenide , an oxidized electron acceptor
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product selenide simple molecule nd nd
reactant selenocysteine simple molecule nd nd
reactant a reduced electron acceptor simple molecule nd nd
product ala simple molecule nd nd
product an oxidized electron acceptor simple molecule nd nd
ahpCF_mRNA AhpC
Name: ahpCF_mRNA -> AhpC
Description: Translation of AhpC
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant ahpCF_mRNA RNA nd nd
product AhpC protein nd nd
AhpC + AhpF AhpC-AhpF
Name: AhpC + AhpF -> AhpC-AhpF
Description: Reaction transforming AhpC, AhpF into AhpC-AhpF
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant AhpC protein nd nd
product AhpC-AhpF complex nd nd
reactant AhpF protein nd nd
ROH ROOH
Name: ROH -> ROOH
Description: Reaction transforming ROH into ROOH
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant ROH simple molecule nd nd
product ROOH simple molecule nd nd
dsbG_mRNA DsbG
Name: dsbG_mRNA -> DsbG
Description: Translation of DsbG
Type: translation
Components:
Function Name Type Evidence Reference(s)
product DsbG protein nd nd
reactant dsbG_mRNA RNA nd nd
a protein with incorrect disulfide bonds a protein with correct disulfide bonds
Name: a protein with incorrect disulfide bonds -> a protein with correct disulfide bonds
Description: Reaction transforming a protein with incorrect disulfide bonds into a protein with correct disulfide bonds
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant a protein with incorrect disulfide bonds simple molecule nd nd
product a protein with correct disulfide bonds simple molecule nd nd
protein with reduced SH groups protein with oxidized disulfide bonds
Name: protein with reduced SH groups -> protein with oxidized disulfide bonds
Description: Reaction transforming protein with reduced SH groups into protein with oxidized disulfide bonds
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant protein with reduced SH groups simple molecule nd nd
product protein with oxidized disulfide bonds simple molecule nd nd
mntH_mRNA MntH
Name: mntH_mRNA -> MntH
Description: Translation of MntH
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant mntH_mRNA RNA nd nd
product MntH protein nd nd
Fe(II)_Ext Fe(II)
Name: Fe(II)_Ext -> Fe(II)
Description: Transport of Fe(II)_Ext through a bacterial membrane, leading to the presence of Fe(II) inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant Fe(II)_Ext simple molecule nd nd
product Fe(II) simple molecule nd nd
Mn(II)_Ext Mn(II)
Name: Mn(II)_Ext -> Mn(II)
Description: Transport of Mn(II)_Ext through a bacterial membrane, leading to the presence of Mn(II) inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product Mn(II) simple molecule nd nd
reactant Mn(II)_Ext simple molecule nd nd
sufABCDSE_mRNA SufA
Name: sufABCDSE_mRNA -> SufA
Description: Translation of SufA
Type: translation
Components:
Function Name Type Evidence Reference(s)
product SufA protein nd nd
reactant sufABCDSE_mRNA RNA nd nd
ahpCF_mRNA AhpF
Name: ahpCF_mRNA -> AhpF
Description: Translation of AhpF
Type: translation
Components:
Function Name Type Evidence Reference(s)
product AhpF protein nd nd
reactant ahpCF_mRNA RNA nd nd
gntP_mRNA GntP
Name: gntP_mRNA -> GntP
Description: Translation of GntP
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant gntP_mRNA RNA nd nd
product GntP protein nd nd
fructuronate_Ext fructuronate
Name: fructuronate_Ext -> fructuronate
Description: Transport of fructuronate_Ext through a bacterial membrane, leading to the presence of fructuronate inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product fructuronate simple molecule nd nd
reactant fructuronate_Ext simple molecule nd nd
D-gluconate_Ext D-gluconate
Name: D-gluconate_Ext -> D-gluconate
Description: Transport of D-gluconate_Ext through a bacterial membrane, leading to the presence of D-gluconate inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant D-gluconate_Ext simple molecule nd nd
product D-gluconate simple molecule nd nd
ybjC-nfsA-rimK-ybjN_mRNA YbjC
Name: ybjC-nfsA-rimK-ybjN_mRNA -> YbjC
Description: Translation of YbjC
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant ybjC-nfsA-rimK-ybjN_mRNA RNA nd nd
product YbjC protein nd nd
ybjC-nfsA-rimK-ybjN_mRNA RimK
Name: ybjC-nfsA-rimK-ybjN_mRNA -> RimK
Description: Translation of RimK
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant ybjC-nfsA-rimK-ybjN_mRNA RNA nd nd
product RimK protein nd nd
a [protein] alpha-L-glutamate + L-glutamate a [protein] α-L-glu-alpha-L-glu + phosphate
Name: a [protein] alpha-L-glutamate + L-glutamate -> a [protein] α-L-glu-alpha-L-glu + phosphate
Description: Reaction transforming a [protein] alpha-L-glutamate, L-glutamate into a [protein] α-L-glu-alpha-L-glu, phosphate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product a [protein] α-L-glu-alpha-L-glu simple molecule nd nd
reactant L-glutamate simple molecule nd nd
reactant a [protein] alpha-L-glutamate simple molecule nd nd
product phosphate simple molecule nd nd
fhuF_mRNA FhuF
Name: fhuF_mRNA -> FhuF
Description: Translation of FhuF
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant fhuF_mRNA RNA nd nd
product FhuF protein nd nd
hcp-hcr_mRNA Hcp
Name: hcp-hcr_mRNA -> Hcp
Description: Translation of Hcp
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant hcp-hcr_mRNA RNA nd nd
product Hcp protein nd nd
ammonia + an oxidized electron acceptor a reduced electron acceptor + NH2OH
Name: ammonia + an oxidized electron acceptor -> a reduced electron acceptor + NH2OH
Description: Reaction transforming ammonia, an oxidized electron acceptor into a reduced electron acceptor, NH2OH
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant ammonia simple molecule nd nd
product a reduced electron acceptor simple molecule nd nd
reactant an oxidized electron acceptor simple molecule nd nd
product NH2OH simple molecule nd nd
hemH_mRNA HemH
Name: hemH_mRNA -> HemH
Description: Translation of HemH
Type: translation
Components:
Function Name Type Evidence Reference(s)
product HemH protein nd nd
reactant hemH_mRNA RNA nd nd
Fe(II) + protoporphyrin protoheme IX
Name: Fe(II) + protoporphyrin -> protoheme IX
Description: Reaction transforming Fe(II), protoporphyrin into protoheme IX
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product protoheme IX simple molecule nd nd
reactant Fe(II) simple molecule nd nd
reactant protoporphyrin simple molecule nd nd
sufABCDSE_mRNA SufB
Name: sufABCDSE_mRNA -> SufB
Description: Translation of SufB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant sufABCDSE_mRNA RNA nd nd
product SufB protein nd nd
oxyS_mRNA OxyS RNA; oxidative stress regulator
Name: oxyS_mRNA -> OxyS RNA; oxidative stress regulator
Description: Translation of OxyS RNA; oxidative stress regulator
Type: translation
Components:
Function Name Type Evidence Reference(s)
product OxyS RNA; oxidative stress regulator RNA nd nd
reactant oxyS_mRNA RNA nd nd
sufABCDSE_mRNA SufC
Name: sufABCDSE_mRNA -> SufC
Description: Translation of SufC
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant sufABCDSE_mRNA RNA nd nd
product SufC protein nd nd
grxA_mRNA GrxA
Name: grxA_mRNA -> GrxA
Description: Translation of GrxA
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant grxA_mRNA RNA nd nd
product GrxA protein nd nd
trxC_mRNA TrxC
Name: trxC_mRNA -> TrxC
Description: Translation of TrxC
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant trxC_mRNA RNA nd nd
product TrxC protein nd nd
oxyR_mRNA OxyR
Name: oxyR_mRNA -> OxyR
Description: Translation of OxyR
Type: translation
Components:
Function Name Type Evidence Reference(s)
product OxyR protein nd nd
reactant oxyR_mRNA RNA nd nd
uof-fur_mRNA Uof
Name: uof-fur_mRNA -> Uof
Description: Translation of Uof
Type: translation
Components:
Function Name Type Evidence Reference(s)
product Uof protein nd nd
reactant uof-fur_mRNA RNA nd nd
yhjA_mRNA YhjA
Name: yhjA_mRNA -> YhjA
Description: Translation of YhjA
Type: translation
Components:
Function Name Type Evidence Reference(s)
product YhjA protein nd nd
reactant yhjA_mRNA RNA nd nd