RegulonDB RegulonDB

OmpR Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
RNA:RygB hydrophilic solute or ion 600 Da_Ext partially N-deacetylated poly-beta-1,6-N-acetyl-D-glucosamine disaccharide chitobiose short-chain alcohol_Ext This Gensor Unit is not yet available FlhC RpsP pgaABCD_mRNA glycerol 1-phosphate TolB RNA:SraE nucleoside sra RpsQ FlhC polyol amino acid_Ext omrB csgDEFG_mRNA sugar phosphate 5-methylthioribose_Ext pgaABCD RpsJ Ala-gamma-D-Glu-Dap base(2) LCFA_Ext RpsD BolA poly-beta-1,6-N-acetyl-D-glucosamine_Ext PgaD FlhD RpsO N-acetylneuraminate_Ext fadL_mRNA RpsI Ala-gamma-D-Glu-Dap_Ext disaccharide_Ext RpsL aldonate_Ext trisaccharide flhDC_mRNA RpsF partially N-deacetylated poly-beta-1,6-N-acetyl-D-glucosamine_Ext oligopeptide OmpR RNA:MicF NmpC RpsI RpsK BolA RpsN PgaA maltose_Ext amide_Ext OmpF CsgE ion_Ext bolA_mRNA nucleotide RpsK organophosphorus compound_Ext CsgD CsgA RpsA inositol OmpF RpsC EcnB betaine_Ext maltose nmpC uridine-diphosphate MCFA_Ext GrxD caprate_Ext nucleotide_Ext short-chain acid anion beta-Neu5Ac ompF amine CsgG trisaccharide_Ext RpsQ lactone_Ext monocarboxylate_Ext RpsD glycoside RpsF sugar phosphate_Ext OmpR amino acid glycerol 1-phosphate_Ext RpsP dtpA_mRNA This Gensor Unit is not yet available RpsT aldonate monocarboxylate flhDC RpsM inositol_Ext RpsS hydroxy carboxylate FlhD amine_Ext MCFA Sra RpsO organophosphorus compound CsgA_Ext RpsU oligopeptide_Ext nucleoside_Ext lactone RpsE sugar RpsS phosphate hydrophilic solute or ion 600 Da ion 5-methylthioribose PgaC DtpA nucleotide sugar_Ext FadL glycoside_Ext phosphate sra_mRNA beta-Neu5Ac_Ext dtpA chitobiose_Ext short-chain acid anion_Ext caprate csgDEFG RpsU TolB RpsJ dicarboxylate_Ext base(2)_Ext CsgG RpsH dipeptide_Ext CsgE micF_mRNA enterobactin RpsH RpsL PgaD sulfadiazine ompC_mRNA RpsB RpsA nucleotide sugar UDP-GlcNAc omrB_mRNA micF organosulfur compound_Ext PgaB GrxD OmpC RpsM hydroxy carboxylate_Ext N-acetylneuraminate aromatic compound PgaC ompC short-chain alcohol ompF_mRNA CsgF RpsC RpsT dicarboxylate poly-beta-1,6-N-acetyl-D-glucosamine nmpC_mRNA omrA_mRNA aromatic compound_Ext fadL amide acetate RpsE RpsR Sra RpsN RpsR betaine polyol_Ext dipeptide bolA RCHO RpsB RpsG enterobactin_Ext RpsG NAcGlc sugar_Ext LCFA omrA organosulfur compound sulfadiazine_Ext RCHO_Ext


Gensor Unit       
Name: OmpR
Signal name: Changes in extracellular osmolarity.
Classification:
Groups: Cell motility
General function prediction only
Lipid transport and metabolism
Carbohydrate transport and metabolism
Signal transduction mechanisms
Amino acid transport and metabolism
Cell wall/membrane/envelope biogenesis
Gene Ontology Terms (GO): biological_process GO:0044780 - bacterial-type flagellum assembly
GO:0044781 - bacterial-type flagellum organization
GO:0043213 - bacteriocin transport
GO:0042710 - biofilm formation
GO:0022610 - biological adhesion
GO:0005975 - carbohydrate metabolic process
Read more >
cellular_component GO:0036405 - anchored component of cell outer membrane
GO:0009279 - cell outer membrane
GO:0005737 - cytoplasm
GO:0005829 - cytosol
GO:0022627 - cytosolic small ribosomal subunit
GO:0045203 - integral component of cell outer membrane
GO:0016021 - integral component of membrane
Read more >
molecular_function GO:0003677 - DNA binding
GO:0001216 - DNA-binding transcription activator activity
GO:0001217 - DNA-binding transcription repressor activity
GO:0008375 - acetylglucosaminyltransferase activity
GO:0000986 - bacterial-type cis-regulatory region sequence-specific DNA binding
GO:0003824 - catalytic activity
GO:0042912 - colicin transmembrane transporter activity
Read more >
Components:
  Function Name Type
  simple_molecule 5-methylthioribose simple_molecule
  simple_molecule 5-methylthioribose_Ext simple_molecule
  simple_molecule Ala-γ-D-Glu-Dap simple_molecule
  simple_molecule Ala-γ-D-Glu-Dap_Ext simple_molecule
  protein BolA protein
  complex BolA-GrxD complex
  simple_molecule CsgA simple_molecule
  simple_molecule CsgA_Ext simple_molecule
  protein CsgD protein
  protein CsgE protein
  complex CsgE-CsgG complex
  protein CsgF protein
  protein CsgG protein
  protein DtpA protein
  protein EcnB protein
  protein FadL protein
  protein FlhC protein
  protein FlhD protein
  complex FlhD-FlhC complex
  protein GrxD protein
  simple_molecule LCFA simple_molecule
  simple_molecule LCFA_Ext simple_molecule
  simple_molecule MCFA simple_molecule
  simple_molecule MCFA_Ext simple_molecule
  simple_molecule N-acetylneuraminate simple_molecule
  simple_molecule N-acetylneuraminate_Ext simple_molecule
  simple_molecule NAcGlc simple_molecule
  protein NmpC protein
  protein OmpC protein
  protein OmpF protein
  protein OmpR protein
  complex OmpR-phosphate complex
  protein PgaA protein
  protein PgaB protein
  protein PgaC protein
  protein PgaD protein
  complex PgaD-PgaC complex
  simple_molecule RCHO simple_molecule
  simple_molecule RCHO_Ext simple_molecule
  protein RNA:MicF protein
  protein RNA:RygB protein
  protein RNA:SraE protein
  protein RpsA protein
  complex RpsA-RpsB-RpsC-RpsD-RpsE-RpsF-RpsG-RpsH-RpsI-RpsJ-RpsK-RpsL-RpsM-RpsN-RpsO-RpsP-RpsQ-RpsR-RpsS-RpsT-RpsU-Sra complex
  protein RpsB protein
  protein RpsC protein
  protein RpsD protein
  protein RpsE protein
  protein RpsF protein
  protein RpsG protein
  protein RpsH protein
  protein RpsI protein
  protein RpsJ protein
  protein RpsK protein
  protein RpsL protein
  protein RpsM protein
  protein RpsN protein
  protein RpsO protein
  protein RpsP protein
  protein RpsQ protein
  protein RpsR protein
  protein RpsS protein
  protein RpsT protein
  protein RpsU protein
  protein Sra protein
  protein TolB protein
  complex TolB-OmpF complex
  simple_molecule UDP-GlcNAc simple_molecule
  simple_molecule acetate simple_molecule
  simple_molecule aldonate simple_molecule
  simple_molecule aldonate_Ext simple_molecule
  simple_molecule amide simple_molecule
  simple_molecule amide_Ext simple_molecule
  simple_molecule amine simple_molecule
  simple_molecule amine_Ext simple_molecule
  simple_molecule amino acid simple_molecule
  simple_molecule amino acid_Ext simple_molecule
  simple_molecule aromatic compound simple_molecule
  simple_molecule aromatic compound_Ext simple_molecule
  simple_molecule base(2) simple_molecule
  simple_molecule base(2)_Ext simple_molecule
  simple_molecule beta-Neu5Ac simple_molecule
  simple_molecule beta-Neu5Ac_Ext simple_molecule
  simple_molecule betaine simple_molecule
  simple_molecule betaine_Ext simple_molecule
  gene bolA gene
  RNA bolA_mRNA RNA
  simple_molecule caprate simple_molecule
  simple_molecule caprate_Ext simple_molecule
  simple_molecule chitobiose simple_molecule
  simple_molecule chitobiose_Ext simple_molecule
  gene csgDEFG gene
  RNA csgDEFG_mRNA RNA
  simple_molecule dicarboxylate simple_molecule
  simple_molecule dicarboxylate_Ext simple_molecule
  simple_molecule dipeptide simple_molecule
  simple_molecule dipeptide_Ext simple_molecule
  simple_molecule disaccharide simple_molecule
  simple_molecule disaccharide_Ext simple_molecule
  gene dtpA gene
  RNA dtpA_mRNA RNA
  gene ecnB gene
  RNA ecnB_mRNA RNA
  simple_molecule enterobactin simple_molecule
  simple_molecule enterobactin_Ext simple_molecule
  gene fadL gene
  RNA fadL_mRNA RNA
  gene flhDC gene
  RNA flhDC_mRNA RNA
  simple_molecule glycerol 1-phosphate simple_molecule
  simple_molecule glycerol 1-phosphate_Ext simple_molecule
  simple_molecule glycoside simple_molecule
  simple_molecule glycoside_Ext simple_molecule
  simple_molecule hydrophilic solute or ion 600 Da simple_molecule
  simple_molecule hydrophilic solute or ion 600 Da_Ext simple_molecule
  simple_molecule hydroxy carboxylate simple_molecule
  simple_molecule hydroxy carboxylate_Ext simple_molecule
  simple_molecule inositol simple_molecule
  simple_molecule inositol_Ext simple_molecule
  simple_molecule ion simple_molecule
  simple_molecule ion_Ext simple_molecule
  simple_molecule lactone simple_molecule
  simple_molecule lactone_Ext simple_molecule
  simple_molecule maltose simple_molecule
  simple_molecule maltose_Ext simple_molecule
  gene micF gene
  RNA micF_mRNA RNA
  simple_molecule monocarboxylate simple_molecule
  simple_molecule monocarboxylate_Ext simple_molecule
  gene nmpC gene
  RNA nmpC_mRNA RNA
  simple_molecule nucleoside simple_molecule
  simple_molecule nucleoside_Ext simple_molecule
  simple_molecule nucleotide simple_molecule
  simple_molecule nucleotide sugar simple_molecule
  simple_molecule nucleotide sugar_Ext simple_molecule
  simple_molecule nucleotide_Ext simple_molecule
  simple_molecule oligopeptide simple_molecule
  simple_molecule oligopeptide_Ext simple_molecule
  gene ompC gene
  RNA ompC_mRNA RNA
  gene ompF gene
  RNA ompF_mRNA RNA
  gene omrA gene
  RNA omrA_mRNA RNA
  gene omrB gene
  RNA omrB_mRNA RNA
  simple_molecule organophosphorus compound simple_molecule
  simple_molecule organophosphorus compound_Ext simple_molecule
  simple_molecule organosulfur compound simple_molecule
  simple_molecule organosulfur compound_Ext simple_molecule
  simple_molecule partially N-deacetylated poly-beta-1,6-N-acetyl-D-glucosamine simple_molecule
  simple_molecule partially N-deacetylated poly-beta-1,6-N-acetyl-D-glucosamine_Ext simple_molecule
  gene pgaABCD gene
  RNA pgaABCD_mRNA RNA
  simple_molecule phosphate simple_molecule
  simple_molecule poly-beta-1,6-N-acetyl-D-glucosamine simple_molecule
  simple_molecule poly-beta-1,6-N-acetyl-D-glucosamine_Ext simple_molecule
  simple_molecule polyol simple_molecule
  simple_molecule polyol_Ext simple_molecule
  simple_molecule short-chain acid anion simple_molecule
  simple_molecule short-chain acid anion_Ext simple_molecule
  simple_molecule short-chain alcohol simple_molecule
  simple_molecule short-chain alcohol_Ext simple_molecule
  gene sra gene
  RNA sra_mRNA RNA
  simple_molecule sugar simple_molecule
  simple_molecule sugar phosphate simple_molecule
  simple_molecule sugar phosphate_Ext simple_molecule
  simple_molecule sugar_Ext simple_molecule
  simple_molecule sulfadiazine simple_molecule
  simple_molecule sulfadiazine_Ext simple_molecule
  simple_molecule trisaccharide simple_molecule
  simple_molecule trisaccharide_Ext simple_molecule
  simple_molecule uridine-diphosphate simple_molecule


Reactions       
Showing 89 reactions
phosphate + OmpR OmpR-phosphate
Name: phosphate + OmpR -> OmpR-phosphate
Description: Reaction transforming phosphate, OmpR into OmpR-phosphate
Type: state transition
Pathway Components: phosphate + OmpR -> OmpR-phosphate
Components:
Function Name Type
reactant OmpR protein
product OmpR-phosphate complex
reactant phosphate simple_molecule
OmpR-phosphate csgDEFG csgDEFG_mRNA
Name: csgDEFG -> csgDEFG_mRNA
Description: Transcription of transcription unit csgDEFG. Reaction activation by OmpR-phosphate.
Type: transcription
Pathway Components: csgDEFG - OmpR-phosphate -> csgDEFG_mRNA
Components:
Function Name Type
activator OmpR-phosphate complex
reactant csgDEFG gene
product csgDEFG_mRNA RNA
OmpR-phosphate dtpA dtpA_mRNA
Name: dtpA -> dtpA_mRNA
Description: Transcription of transcription unit dtpA. Reaction activation by OmpR-phosphate.
Type: transcription
Pathway Components: dtpA - OmpR-phosphate -> dtpA_mRNA
Components:
Function Name Type
activator OmpR-phosphate complex
reactant dtpA gene
product dtpA_mRNA RNA
OmpR-phosphate micF micF_mRNA
Name: micF -> micF_mRNA
Description: Transcription of transcription unit micF. Reaction activation by OmpR-phosphate.
Type: transcription
Pathway Components: micF - OmpR-phosphate -> micF_mRNA
Components:
Function Name Type
activator OmpR-phosphate complex
reactant micF gene
product micF_mRNA RNA
OmpR-phosphate ompC ompC_mRNA
Name: ompC -> ompC_mRNA
Description: Transcription of transcription unit ompC. Reaction activation by OmpR-phosphate.
Type: transcription
Pathway Components: ompC - OmpR-phosphate -> ompC_mRNA
Components:
Function Name Type
activator OmpR-phosphate complex
reactant ompC gene
product ompC_mRNA RNA
OmpR-phosphate OmpR-phosphate ompF ompF_mRNA
Name: ompF -> ompF_mRNA
Description: Transcription of transcription unit ompF. Reaction activation by OmpR-phosphate. Reaction inhibition by OmpR-phosphate.
Type: transcription
Pathway Components: ompF - OmpR-phosphate - OmpR-phosphate -> ompF_mRNA
Components:
Function Name Type
activator OmpR-phosphate complex
inhibitor OmpR-phosphate complex
reactant ompF gene
product ompF_mRNA RNA
OmpR-phosphate omrA omrA_mRNA
Name: omrA -> omrA_mRNA
Description: Transcription of transcription unit omrA. Reaction activation by OmpR-phosphate.
Type: transcription
Pathway Components: omrA - OmpR-phosphate -> omrA_mRNA
Components:
Function Name Type
activator OmpR-phosphate complex
reactant omrA gene
product omrA_mRNA RNA
OmpR-phosphate omrB omrB_mRNA
Name: omrB -> omrB_mRNA
Description: Transcription of transcription unit omrB. Reaction activation by OmpR-phosphate.
Type: transcription
Pathway Components: omrB - OmpR-phosphate -> omrB_mRNA
Components:
Function Name Type
activator OmpR-phosphate complex
reactant omrB gene
product omrB_mRNA RNA
OmpR-phosphate bolA bolA_mRNA
Name: bolA -> bolA_mRNA
Description: Transcription of transcription unit bolA. Reaction inhibition by OmpR-phosphate.
Type: transcription
Pathway Components: bolA - OmpR-phosphate -> bolA_mRNA
Components:
Function Name Type
inhibitor OmpR-phosphate complex
reactant bolA gene
product bolA_mRNA RNA
OmpR-phosphate ecnB ecnB_mRNA
Name: ecnB -> ecnB_mRNA
Description: Transcription of transcription unit ecnB. Reaction inhibition by OmpR-phosphate.
Type: transcription
Pathway Components: ecnB - OmpR-phosphate -> ecnB_mRNA
Components:
Function Name Type
inhibitor OmpR-phosphate complex
reactant ecnB gene
product ecnB_mRNA RNA
OmpR-phosphate fadL fadL_mRNA
Name: fadL -> fadL_mRNA
Description: Transcription of transcription unit fadL. Reaction inhibition by OmpR-phosphate.
Type: transcription
Pathway Components: fadL - OmpR-phosphate -> fadL_mRNA
Components:
Function Name Type
inhibitor OmpR-phosphate complex
reactant fadL gene
product fadL_mRNA RNA
OmpR-phosphate flhDC flhDC_mRNA
Name: flhDC -> flhDC_mRNA
Description: Transcription of transcription unit flhDC. Reaction inhibition by OmpR-phosphate.
Type: transcription
Pathway Components: flhDC - OmpR-phosphate -> flhDC_mRNA
Components:
Function Name Type
inhibitor OmpR-phosphate complex
reactant flhDC gene
product flhDC_mRNA RNA
OmpR-phosphate nmpC nmpC_mRNA
Name: nmpC -> nmpC_mRNA
Description: Transcription of transcription unit nmpC. Reaction inhibition by OmpR-phosphate.
Type: transcription
Pathway Components: nmpC - OmpR-phosphate -> nmpC_mRNA
Components:
Function Name Type
inhibitor OmpR-phosphate complex
reactant nmpC gene
product nmpC_mRNA RNA
OmpR-phosphate pgaABCD pgaABCD_mRNA
Name: pgaABCD -> pgaABCD_mRNA
Description: Transcription of transcription unit pgaABCD. Reaction inhibition by OmpR-phosphate.
Type: transcription
Pathway Components: pgaABCD - OmpR-phosphate -> pgaABCD_mRNA
Components:
Function Name Type
inhibitor OmpR-phosphate complex
reactant pgaABCD gene
product pgaABCD_mRNA RNA
OmpR-phosphate sra sra_mRNA
Name: sra -> sra_mRNA
Description: Transcription of transcription unit sra. Reaction inhibition by OmpR-phosphate.
Type: transcription
Pathway Components: sra - OmpR-phosphate -> sra_mRNA
Components:
Function Name Type
inhibitor OmpR-phosphate complex
reactant sra gene
product sra_mRNA RNA
bolA_mRNA BolA
Name: bolA_mRNA -> BolA
Description: Translation of BolA
Type: translation
Pathway Components: bolA_mRNA -> BolA
Components:
Function Name Type
product BolA protein
reactant bolA_mRNA RNA
BolA + GrxD BolA-GrxD
Name: BolA + GrxD -> BolA-GrxD
Description: Reaction transforming BolA, GrxD into BolA-GrxD
Type: state transition
Pathway Components: BolA + GrxD -> BolA-GrxD
Components:
Function Name Type
reactant BolA protein
product BolA-GrxD complex
reactant GrxD protein
sra_mRNA Sra
Name: sra_mRNA -> Sra
Description: Translation of Sra
Type: translation
Pathway Components: sra_mRNA -> Sra
Components:
Function Name Type
product Sra protein
reactant sra_mRNA RNA
Protein Monomers Protein complex
Name: RpsJ + RpsC + RpsB + RpsK + RpsD + RpsS + RpsG + RpsM + RpsL + RpsF + RpsR + RpsE + RpsO + RpsI + RpsN + RpsU + RpsH + RpsA + RpsP + RpsQ + RpsT + Sra -> RpsA-RpsB-RpsC-RpsD-RpsE-RpsF-RpsG-RpsH-RpsI-RpsJ-RpsK-RpsL-RpsM-RpsN-RpsO-RpsP-RpsQ-RpsR-RpsS-RpsT-RpsU-Sra
Description: Reaction transforming RpsJ, RpsC, RpsB, RpsK, RpsD, RpsS, RpsG, RpsM, RpsL, RpsF, RpsR, RpsE, RpsO, RpsI, RpsN, RpsU, RpsH, RpsA, RpsP, RpsQ, RpsT, Sra into RpsA-RpsB-RpsC-RpsD-RpsE-RpsF-RpsG-RpsH-RpsI-RpsJ-RpsK-RpsL-RpsM-RpsN-RpsO-RpsP-RpsQ-RpsR-RpsS-RpsT-RpsU-Sra
Type: state transition
Pathway Components: RpsJ + RpsC + RpsB + RpsK + RpsD + RpsS + RpsG + RpsM + RpsL + RpsF + RpsR + RpsE + RpsO + RpsI + RpsN + RpsU + RpsH + RpsA + RpsP + RpsQ + RpsT + Sra -> RpsA-RpsB-RpsC-RpsD-RpsE-RpsF-RpsG-RpsH-RpsI-RpsJ-RpsK-RpsL-RpsM-RpsN-RpsO-RpsP-RpsQ-RpsR-RpsS-RpsT-RpsU-Sra
Components: Show/Hide Components Table
ompC_mRNA OmpC
Name: ompC_mRNA -> OmpC
Description: Translation of OmpC
Type: translation
Pathway Components: ompC_mRNA -> OmpC
Components:
Function Name Type
product OmpC protein
reactant ompC_mRNA RNA
OmpC OmpF hydrophilic solute or ion 600 Da_Ext hydrophilic solute or ion 600 Da
Name: hydrophilic solute or ion 600 Da_Ext -> hydrophilic solute or ion 600 Da
Description: Transport of hydrophilic solute or ion 600 Da_Ext through a bacterial membrane, leading to the presence of hydrophilic solute or ion 600 Da inside the cell.
Type: transport
Pathway Components: hydrophilic solute or ion 600 Da_Ext - OmpC - OmpF -> hydrophilic solute or ion 600 Da
Components:
Function Name Type
catalyzer OmpC protein
catalyzer OmpF protein
product hydrophilic solute or ion 600 Da simple_molecule
reactant hydrophilic solute or ion 600 Da_Ext simple_molecule
OmpC OmpF organophosphorus compound_Ext organophosphorus compound
Name: organophosphorus compound_Ext -> organophosphorus compound
Description: Transport of organophosphorus compound_Ext through a bacterial membrane, leading to the presence of organophosphorus compound inside the cell.
Type: transport
Pathway Components: organophosphorus compound_Ext - OmpC - OmpF -> organophosphorus compound
Components:
Function Name Type
catalyzer OmpC protein
catalyzer OmpF protein
product organophosphorus compound simple_molecule
reactant organophosphorus compound_Ext simple_molecule
OmpC OmpF MCFA_Ext MCFA
Name: MCFA_Ext -> MCFA
Description: Transport of MCFA_Ext through a bacterial membrane, leading to the presence of MCFA inside the cell.
Type: transport
Pathway Components: MCFA_Ext - OmpC - OmpF -> MCFA
Components:
Function Name Type
product MCFA simple_molecule
reactant MCFA_Ext simple_molecule
catalyzer OmpC protein
catalyzer OmpF protein
OmpC OmpF caprate_Ext caprate
Name: caprate_Ext -> caprate
Description: Transport of caprate_Ext through a bacterial membrane, leading to the presence of caprate inside the cell.
Type: transport
Pathway Components: caprate_Ext - OmpC - OmpF -> caprate
Components:
Function Name Type
catalyzer OmpC protein
catalyzer OmpF protein
product caprate simple_molecule
reactant caprate_Ext simple_molecule
OmpC OmpF glycoside_Ext glycoside
Name: glycoside_Ext -> glycoside
Description: Transport of glycoside_Ext through a bacterial membrane, leading to the presence of glycoside inside the cell.
Type: transport
Pathway Components: glycoside_Ext - OmpC - OmpF -> glycoside
Components:
Function Name Type
catalyzer OmpC protein
catalyzer OmpF protein
product glycoside simple_molecule
reactant glycoside_Ext simple_molecule
OmpC OmpF sugar_Ext sugar
Name: sugar_Ext -> sugar
Description: Transport of sugar_Ext through a bacterial membrane, leading to the presence of sugar inside the cell.
Type: transport
Pathway Components: sugar_Ext - OmpC - OmpF -> sugar
Components:
Function Name Type
catalyzer OmpC protein
catalyzer OmpF protein
product sugar simple_molecule
reactant sugar_Ext simple_molecule
OmpC OmpF beta-Neu5Ac_Ext beta-Neu5Ac
Name: beta-Neu5Ac_Ext -> beta-Neu5Ac
Description: Transport of beta-Neu5Ac_Ext through a bacterial membrane, leading to the presence of beta-Neu5Ac inside the cell.
Type: transport
Pathway Components: beta-Neu5Ac_Ext - OmpC - OmpF -> beta-Neu5Ac
Components:
Function Name Type
catalyzer OmpC protein
catalyzer OmpF protein
product beta-Neu5Ac simple_molecule
reactant beta-Neu5Ac_Ext simple_molecule
OmpC OmpF N-acetylneuraminate_Ext N-acetylneuraminate
Name: N-acetylneuraminate_Ext -> N-acetylneuraminate
Description: Transport of N-acetylneuraminate_Ext through a bacterial membrane, leading to the presence of N-acetylneuraminate inside the cell.
Type: transport
Pathway Components: N-acetylneuraminate_Ext - OmpC - OmpF -> N-acetylneuraminate
Components:
Function Name Type
product N-acetylneuraminate simple_molecule
reactant N-acetylneuraminate_Ext simple_molecule
catalyzer OmpC protein
catalyzer OmpF protein
OmpC OmpF sugar phosphate_Ext sugar phosphate
Name: sugar phosphate_Ext -> sugar phosphate
Description: Transport of sugar phosphate_Ext through a bacterial membrane, leading to the presence of sugar phosphate inside the cell.
Type: transport
Pathway Components: sugar phosphate_Ext - OmpC - OmpF -> sugar phosphate
Components:
Function Name Type
catalyzer OmpC protein
catalyzer OmpF protein
product sugar phosphate simple_molecule
reactant sugar phosphate_Ext simple_molecule
OmpC OmpF monocarboxylate_Ext monocarboxylate
Name: monocarboxylate_Ext -> monocarboxylate
Description: Transport of monocarboxylate_Ext through a bacterial membrane, leading to the presence of monocarboxylate inside the cell.
Type: transport
Pathway Components: monocarboxylate_Ext - OmpC - OmpF -> monocarboxylate
Components:
Function Name Type
catalyzer OmpC protein
catalyzer OmpF protein
product monocarboxylate simple_molecule
reactant monocarboxylate_Ext simple_molecule
OmpC OmpF aromatic compound_Ext aromatic compound
Name: aromatic compound_Ext -> aromatic compound
Description: Transport of aromatic compound_Ext through a bacterial membrane, leading to the presence of aromatic compound inside the cell.
Type: transport
Pathway Components: aromatic compound_Ext - OmpC - OmpF -> aromatic compound
Components:
Function Name Type
catalyzer OmpC protein
catalyzer OmpF protein
product aromatic compound simple_molecule
reactant aromatic compound_Ext simple_molecule
OmpC OmpF enterobactin_Ext enterobactin
Name: enterobactin_Ext -> enterobactin
Description: Transport of enterobactin_Ext through a bacterial membrane, leading to the presence of enterobactin inside the cell.
Type: transport
Pathway Components: enterobactin_Ext - OmpC - OmpF -> enterobactin
Components:
Function Name Type
catalyzer OmpC protein
catalyzer OmpF protein
product enterobactin simple_molecule
reactant enterobactin_Ext simple_molecule
OmpC OmpF trisaccharide_Ext trisaccharide
Name: trisaccharide_Ext -> trisaccharide
Description: Transport of trisaccharide_Ext through a bacterial membrane, leading to the presence of trisaccharide inside the cell.
Type: transport
Pathway Components: trisaccharide_Ext - OmpC - OmpF -> trisaccharide
Components:
Function Name Type
catalyzer OmpC protein
catalyzer OmpF protein
product trisaccharide simple_molecule
reactant trisaccharide_Ext simple_molecule
OmpC OmpF disaccharide_Ext disaccharide
Name: disaccharide_Ext -> disaccharide
Description: Transport of disaccharide_Ext through a bacterial membrane, leading to the presence of disaccharide inside the cell.
Type: transport
Pathway Components: disaccharide_Ext - OmpC - OmpF -> disaccharide
Components:
Function Name Type
catalyzer OmpC protein
catalyzer OmpF protein
product disaccharide simple_molecule
reactant disaccharide_Ext simple_molecule
OmpC OmpF maltose_Ext maltose
Name: maltose_Ext -> maltose
Description: Transport of maltose_Ext through a bacterial membrane, leading to the presence of maltose inside the cell.
Type: transport
Pathway Components: maltose_Ext - OmpC - OmpF -> maltose
Components:
Function Name Type
catalyzer OmpC protein
catalyzer OmpF protein
product maltose simple_molecule
reactant maltose_Ext simple_molecule
OmpC OmpF chitobiose_Ext chitobiose
Name: chitobiose_Ext -> chitobiose
Description: Transport of chitobiose_Ext through a bacterial membrane, leading to the presence of chitobiose inside the cell.
Type: transport
Pathway Components: chitobiose_Ext - OmpC - OmpF -> chitobiose
Components:
Function Name Type
catalyzer OmpC protein
catalyzer OmpF protein
product chitobiose simple_molecule
reactant chitobiose_Ext simple_molecule
OmpC OmpF oligopeptide_Ext oligopeptide
Name: oligopeptide_Ext -> oligopeptide
Description: Transport of oligopeptide_Ext through a bacterial membrane, leading to the presence of oligopeptide inside the cell.
Type: transport
Pathway Components: oligopeptide_Ext - OmpC - OmpF -> oligopeptide
Components:
Function Name Type
catalyzer OmpC protein
catalyzer OmpF protein
product oligopeptide simple_molecule
reactant oligopeptide_Ext simple_molecule
OmpC OmpF nucleotide_Ext nucleotide
Name: nucleotide_Ext -> nucleotide
Description: Transport of nucleotide_Ext through a bacterial membrane, leading to the presence of nucleotide inside the cell.
Type: transport
Pathway Components: nucleotide_Ext - OmpC - OmpF -> nucleotide
Components:
Function Name Type
catalyzer OmpC protein
catalyzer OmpF protein
product nucleotide simple_molecule
reactant nucleotide_Ext simple_molecule
OmpC OmpF nucleotide sugar_Ext nucleotide sugar
Name: nucleotide sugar_Ext -> nucleotide sugar
Description: Transport of nucleotide sugar_Ext through a bacterial membrane, leading to the presence of nucleotide sugar inside the cell.
Type: transport
Pathway Components: nucleotide sugar_Ext - OmpC - OmpF -> nucleotide sugar
Components:
Function Name Type
catalyzer OmpC protein
catalyzer OmpF protein
product nucleotide sugar simple_molecule
reactant nucleotide sugar_Ext simple_molecule
OmpC OmpF nucleoside_Ext nucleoside
Name: nucleoside_Ext -> nucleoside
Description: Transport of nucleoside_Ext through a bacterial membrane, leading to the presence of nucleoside inside the cell.
Type: transport
Pathway Components: nucleoside_Ext - OmpC - OmpF -> nucleoside
Components:
Function Name Type
catalyzer OmpC protein
catalyzer OmpF protein
product nucleoside simple_molecule
reactant nucleoside_Ext simple_molecule
OmpC OmpF RCHO_Ext RCHO
Name: RCHO_Ext -> RCHO
Description: Transport of RCHO_Ext through a bacterial membrane, leading to the presence of RCHO inside the cell.
Type: transport
Pathway Components: RCHO_Ext - OmpC - OmpF -> RCHO
Components:
Function Name Type
catalyzer OmpC protein
catalyzer OmpF protein
product RCHO simple_molecule
reactant RCHO_Ext simple_molecule
OmpC OmpF lactone_Ext lactone
Name: lactone_Ext -> lactone
Description: Transport of lactone_Ext through a bacterial membrane, leading to the presence of lactone inside the cell.
Type: transport
Pathway Components: lactone_Ext - OmpC - OmpF -> lactone
Components:
Function Name Type
catalyzer OmpC protein
catalyzer OmpF protein
product lactone simple_molecule
reactant lactone_Ext simple_molecule
OmpC OmpF amide_Ext amide
Name: amide_Ext -> amide
Description: Transport of amide_Ext through a bacterial membrane, leading to the presence of amide inside the cell.
Type: transport
Pathway Components: amide_Ext - OmpC - OmpF -> amide
Components:
Function Name Type
catalyzer OmpC protein
catalyzer OmpF protein
product amide simple_molecule
reactant amide_Ext simple_molecule
OmpC OmpF amine_Ext amine
Name: amine_Ext -> amine
Description: Transport of amine_Ext through a bacterial membrane, leading to the presence of amine inside the cell.
Type: transport
Pathway Components: amine_Ext - OmpC - OmpF -> amine
Components:
Function Name Type
catalyzer OmpC protein
catalyzer OmpF protein
product amine simple_molecule
reactant amine_Ext simple_molecule
OmpC OmpF hydroxy carboxylate_Ext hydroxy carboxylate
Name: hydroxy carboxylate_Ext -> hydroxy carboxylate
Description: Transport of hydroxy carboxylate_Ext through a bacterial membrane, leading to the presence of hydroxy carboxylate inside the cell.
Type: transport
Pathway Components: hydroxy carboxylate_Ext - OmpC - OmpF -> hydroxy carboxylate
Components:
Function Name Type
catalyzer OmpC protein
catalyzer OmpF protein
product hydroxy carboxylate simple_molecule
reactant hydroxy carboxylate_Ext simple_molecule
OmpC OmpF aldonate_Ext aldonate
Name: aldonate_Ext -> aldonate
Description: Transport of aldonate_Ext through a bacterial membrane, leading to the presence of aldonate inside the cell.
Type: transport
Pathway Components: aldonate_Ext - OmpC - OmpF -> aldonate
Components:
Function Name Type
catalyzer OmpC protein
catalyzer OmpF protein
product aldonate simple_molecule
reactant aldonate_Ext simple_molecule
OmpC OmpF betaine_Ext betaine
Name: betaine_Ext -> betaine
Description: Transport of betaine_Ext through a bacterial membrane, leading to the presence of betaine inside the cell.
Type: transport
Pathway Components: betaine_Ext - OmpC - OmpF -> betaine
Components:
Function Name Type
catalyzer OmpC protein
catalyzer OmpF protein
product betaine simple_molecule
reactant betaine_Ext simple_molecule
OmpC OmpF