RegulonDB RegulonDB

NsrR Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
2'-deoxycytidine 2'-deoxyuridine 2,5-diketo-D-gluconate 2-(alpha-hydroxyethyl)-TPP L-sorbosonate ketoglutarate 3-(3-hydroxyphenyl)propionate 3-(3-hydroxyphenyl)propionate_Ext 3-hydroxy-trans-cinnamate 3-hydroxy-trans-cinnamate_Ext 3-sulfinoalanine 4NBZ 4NBA 5,6,7,8-tetrahydropteridine 6,7-dihydropteridine AceE AceF BamE BdcA CO2 Cdd Cu(I) Cu(II) DkgB DsdC FdhF FeaB FeaR FhlA FliA FliY FliZ GDP GTP GrxD H2 Hcp Hcr Hmp HycA HycB HycC HycD HycE HycF HycG HycH HycI HypA HypB HypC HypD HypE IhfA InfC L-alanine L-cysteine L-glutamate L-phenylalanine L-phenylalanyl-tRNAphe thr L-threonyl-tRNAthr Lpd Lrp MhpT lipid I N-acetyl-beta-D-mannosaminouronyl-(1-<4)-N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol Ndh NorR NrfA NrfB NrfC NrfD NrfE NrfF NrfG NsrR PgpC PheM PheS PheT Rfe RffA RffC RffD RffE RffG RffH RffM RffT RplT RpmI This Gensor Unit is not yet available S-adenosyl-L-homocysteine S-adenosyl-L-methionine S-sulfanyl-[acceptor] SodB SufA SufB SufC SufD SufE SufS TadA TehA TehB ThrS TsgA Udp UDP-GlcNAc UDP-ManNAc UDP-N-acetyl-alpha-D-mannosaminouronate UMP WzxE WzyE WzzE YdbD YeaE YeaR YgbA YoaG YtfE [2Fe-2S]2+ [tRNAArg2]-adenosine34 [tRNAArg2]-inosine34 a C terminal 32 amino-acid peptide an [enzyme] N6-(S-acetyldihydrolipoyl)lysine a [pyruvate dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine a [pyruvate dehydrogenase E2 protein] N6-lipoyl-L-lysine a large subunit of hydrogenase 3 a precursor of large subunit of hydrogenase 3 a reduced cytochrome c552 a reduced electron acceptor a reduced hydrogenase 3 a sulfur acceptor aceEF aceEF_mRNA acetol ac-CoA alpha-D-glucose 1-phosphate ammonia phosphatidylglycerol 1-phosphatidyl-glycerol-P an L-cysteine desulfurase an [L-cysteine desulfurase]-S-sulfanyl-L-cysteine an oxidized cytochrome c552 an oxidized electron acceptor an oxidized hydrogenase 3 an ubiquinol ubiquinone bamE bamE_mRNA bdcA bdcA_mRNA cdd cdd_mRNA CoA cytidine TDP dTDP-4-acetamido-4,6-dideoxy-D-galactose TDP-4-oxo-6-deoxy--alpha-D-glucose dTDP-alpha-D-fucosamine TDP-glucose TTP ditrans,polycis-undecaprenyl phosphate PP dkgB dkgB_mRNA dsdC dsdC_mRNA ethidium ethidium_Ext feaB feaB_mRNA feaR feaR_mRNA fliAZY fliAZY_mRNA formate grxD grxD_mRNA hcp-hcr hcp-hcr_mRNA hmp hmp_mRNA hycABCDEFGHI hycABCDEFGHI_mRNA perhydrol NH2OH hypABCDE hypABCDE-fhlA hypABCDE-fhlA_mRNA hypABCDE_mRNA lrp lrp_mRNA mepH mepH_mRNA methanetelluronate oxopropanal mhpT mhpT_mRNA ndh ndh_mRNA nitrate NO nitrite norR norR_mRNA nrfABCDEFG nrfABCDEFG_mRNA oxygen pgpC-tadA pgpC-tadA_mRNA PAA phenylacetate phosphate pyruvate This Gensor Unit is not yet available This Gensor Unit is not yet available rybB rybB_mRNA selenide selenocysteine sodB sodB_mRNA sufABCDSE sufABCDSE_mRNA sulfite superoxide tRNAphe tRNAthr tehAB tehAB_mRNA TeO2 TDP thrS-infC thrS-infC-rpmI-rplT-pheMST-ihfA thrS-infC-rpmI-rplT-pheMST-ihfA_mRNA thrS-infC_mRNA tsgA tsgA_mRNA undecaprenyl N-acetyl-glucosaminyl-N-acetyl-mannosaminuronate-4-acetamido-4,6-dideoxy-D-galactose pyrophosphate undecaprenyl N-acetyl-glucosaminyl-N-acetyl-mannosaminuronate-4-acetamido-4,6-dideoxy-D-galactose pyrophosphate_Ext uridine waaH waaH_mRNA ydbD ydbD_mRNA yeaE yeaE_mRNA yeaR-yoaG yeaR-yoaG_mRNA ygbA ygbA_mRNA ytfE ytfE_mRNA |Ox-Hybrid-Cluster-Proteins| |Red-Hybrid-Cluster-Proteins| NsrR NO NsrR [2Fe-2S]2+ FdhF HycE HycB HycG HycF HycC HycD HycD HycC HycF HycG HycB HycE NrfD NrfC NrfB NrfA PheS PheT AceE AceF Lpd PP PP CO2 CO2 ac-CoA ac-CoA ammonia CoA CO2 MepH peptidoglycan D-alanyl-DAP crosslink peptidoglycan tetrapeptide, glycan chain 2 peptidoglycan tetrapeptide, glycan chain 1 WaaH glucosyl-(heptosyl)3-Kdo2-lipid A-phosphate glucosyl-(heptosyl)3-glucuronosyl-Kdo2-lipid A-phosphate UDP UDP-glucuronate L-alanine a sulfur acceptor L-alanine


Gensor Unit       
Name: NsrR
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): GO:1902670 - carbon dioxide binding
GO:0047241 - lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
GO:0015020 - glucuronosyltransferase activity
GO:0006655 - phosphatidylglycerol biosynthetic process
GO:0047844 - deoxycytidine deaminase activity
GO:0043201 - response to leucine
GO:0071555 - cell wall organization
GO:0000303 - response to superoxide
GO:0032843 - hydroperoxide reductase activity
GO:0006801 - superoxide metabolic process
GO:0046583 - cation efflux transmembrane transporter activity
Read more >
Components:
Function Name Type
protein WaaH protein


Reactions       
Showing 182 reactions
feaB feaB_mRNA
Name: feaB -> feaB_mRNA
Description: Transcription of transcription unit feaB; reaction activation by FeaR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant feaB gene nd nd
product feaB_mRNA RNA nd nd
hcp-hcr hcp-hcr_mRNA
Name: hcp-hcr -> hcp-hcr_mRNA
Description: Transcription of transcription unit hcp-hcr; reaction activation by NarL-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product hcp-hcr_mRNA RNA nd nd
reactant hcp-hcr gene nd nd
hmp hmp_mRNA
Name: hmp -> hmp_mRNA
Description: Transcription of transcription unit hmp; reaction inhibition by Fur-Fe(II).
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant hmp gene nd nd
product hmp_mRNA RNA nd nd
nrfABCDEFG nrfABCDEFG_mRNA
Name: nrfABCDEFG -> nrfABCDEFG_mRNA
Description: Transcription of transcription unit nrfABCDEFG; reaction activation by FlhDC.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant nrfABCDEFG gene nd nd
product nrfABCDEFG_mRNA RNA nd nd
rybB rybB_mRNA
Name: rybB -> rybB_mRNA
Description: Transcription of transcription unit rybB; reaction inhibition by NsrR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product rybB_mRNA RNA nd nd
reactant rybB gene nd nd
tehAB tehAB_mRNA
Name: tehAB -> tehAB_mRNA
Description: Transcription of transcription unit tehAB; reaction inhibition by NsrR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product tehAB_mRNA RNA nd nd
reactant tehAB gene nd nd
yeaR-yoaG yeaR-yoaG_mRNA
Name: yeaR-yoaG -> yeaR-yoaG_mRNA
Description: Transcription of transcription unit yeaR-yoaG; reaction activation by NarL-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant yeaR-yoaG gene nd nd
product yeaR-yoaG_mRNA RNA nd nd
ygbA ygbA_mRNA
Name: ygbA -> ygbA_mRNA
Description: Transcription of transcription unit ygbA; reaction inhibition by NsrR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant ygbA gene nd nd
product ygbA_mRNA RNA nd nd
ytfE ytfE_mRNA
Name: ytfE -> ytfE_mRNA
Description: Transcription of transcription unit ytfE; reaction activation by NarL-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant ytfE gene nd nd
product ytfE_mRNA RNA nd nd
NsrR + NO NsrR-NO
Name: NsrR + NO -> NsrR-NO
Description: Reaction transforming NsrR, NO into NsrR-NO
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant NO simple molecule nd nd
reactant NsrR protein nd nd
product NsrR-NO complex nd nd
aceEF aceEF_mRNA
Name: aceEF -> aceEF_mRNA
Description: Transcription of transcription unit aceEF; reaction inhibition by NsrR-NO.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product aceEF_mRNA RNA nd nd
reactant aceEF gene nd nd
bamE bamE_mRNA
Name: bamE -> bamE_mRNA
Description: Transcription of transcription unit bamE; reaction inhibition by CpxR-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product bamE_mRNA RNA nd nd
reactant bamE gene nd nd
bdcA bdcA_mRNA
Name: bdcA -> bdcA_mRNA
Description: Transcription of transcription unit bdcA; reaction inhibition by NsrR-NO.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product bdcA_mRNA RNA nd nd
reactant bdcA gene nd nd
cdd cdd_mRNA
Name: cdd -> cdd_mRNA
Description: Transcription of transcription unit cdd; reaction inhibition by CytR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product cdd_mRNA RNA nd nd
reactant cdd gene nd nd
dkgB dkgB_mRNA
Name: dkgB -> dkgB_mRNA
Description: Transcription of transcription unit dkgB; reaction inhibition by NsrR-NO.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product dkgB_mRNA RNA nd nd
reactant dkgB gene nd nd
dsdC dsdC_mRNA
Name: dsdC -> dsdC_mRNA
Description: Transcription of transcription unit dsdC; reaction inhibition by DsdC-D-serine.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant dsdC gene nd nd
product dsdC_mRNA RNA nd nd
feaR feaR_mRNA
Name: feaR -> feaR_mRNA
Description: Transcription of transcription unit feaR; reaction inhibition by NsrR-NO.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product feaR_mRNA RNA nd nd
reactant feaR gene nd nd
fliAZY fliAZY_mRNA
Name: fliAZY -> fliAZY_mRNA
Description: Transcription of transcription unit fliAZY; reaction activation by FlhDC.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product fliAZY_mRNA RNA nd nd
reactant fliAZY gene nd nd
grxD grxD_mRNA
Name: grxD -> grxD_mRNA
Description: Transcription of transcription unit grxD; reaction inhibition by NsrR-NO.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product grxD_mRNA RNA nd nd
reactant grxD gene nd nd
hycABCDEFGHI hycABCDEFGHI_mRNA
Name: hycABCDEFGHI -> hycABCDEFGHI_mRNA
Description: Transcription of transcription unit hycABCDEFGHI; reaction activation by FhlA-Formate.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product hycABCDEFGHI_mRNA RNA nd nd
reactant hycABCDEFGHI gene nd nd
hypABCDE hypABCDE_mRNA
Name: hypABCDE -> hypABCDE_mRNA
Description: Transcription of transcription unit hypABCDE; reaction inhibition by NsrR-NO.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant hypABCDE gene nd nd
product hypABCDE_mRNA RNA nd nd
hypABCDE-fhlA hypABCDE-fhlA_mRNA
Name: hypABCDE-fhlA -> hypABCDE-fhlA_mRNA
Description: Transcription of transcription unit hypABCDE-fhlA; reaction activation by FhlA-Formate.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product hypABCDE-fhlA_mRNA RNA nd nd
reactant hypABCDE-fhlA gene nd nd
lrp lrp_mRNA
Name: lrp -> lrp_mRNA
Description: Transcription of transcription unit lrp; reaction activation by GadE.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant lrp gene nd nd
product lrp_mRNA RNA nd nd
mepH mepH_mRNA
Name: mepH -> mepH_mRNA
Description: Transcription of transcription unit mepH; reaction inhibition by NsrR-NO.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant mepH gene nd nd
product mepH_mRNA RNA nd nd
mhpT mhpT_mRNA
Name: mhpT -> mhpT_mRNA
Description: Transcription of transcription unit mhpT; reaction inhibition by NsrR-NO.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant mhpT gene nd nd
product mhpT_mRNA RNA nd nd
ndh ndh_mRNA
Name: ndh -> ndh_mRNA
Description: Transcription of transcription unit ndh; reaction inhibition by Fur-Fe(II).
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant ndh gene nd nd
product ndh_mRNA RNA nd nd
norR norR_mRNA
Name: norR -> norR_mRNA
Description: Transcription of transcription unit norR; reaction inhibition by NorR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant norR gene nd nd
product norR_mRNA RNA nd nd
pgpC-tadA pgpC-tadA_mRNA
Name: pgpC-tadA -> pgpC-tadA_mRNA
Description: Transcription of transcription unit pgpC-tadA; reaction inhibition by NsrR-NO.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant pgpC-tadA gene nd nd
product pgpC-tadA_mRNA RNA nd nd
rfe-wzzE-rffEDGHCA-wzxE-rffT-wzyE-rffM rfe-wzzE-rffEDGHCA-wzxE-rffT-wzyE-rffM_mRNA
Name: rfe-wzzE-rffEDGHCA-wzxE-rffT-wzyE-rffM -> rfe-wzzE-rffEDGHCA-wzxE-rffT-wzyE-rffM_mRNA
Description: Transcription of transcription unit rfe-wzzE-rffEDGHCA-wzxE-rffT-wzyE-rffM; reaction inhibition by NsrR-NO.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product rfe-wzzE-rffEDGHCA-wzxE-rffT-wzyE-rffM_mRNA RNA nd nd
reactant rfe-wzzE-rffEDGHCA-wzxE-rffT-wzyE-rffM gene nd nd
sodB sodB_mRNA
Name: sodB -> sodB_mRNA
Description: Transcription of transcription unit sodB; reaction inhibition by NsrR-NO.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product sodB_mRNA RNA nd nd
reactant sodB gene nd nd
sufABCDSE sufABCDSE_mRNA
Name: sufABCDSE -> sufABCDSE_mRNA
Description: Transcription of transcription unit sufABCDSE; reaction inhibition by Fur-Fe(II).
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant sufABCDSE gene nd nd
product sufABCDSE_mRNA RNA nd nd
thrS-infC thrS-infC_mRNA
Name: thrS-infC -> thrS-infC_mRNA
Description: Transcription of transcription unit thrS-infC; reaction inhibition by NsrR-NO.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product thrS-infC_mRNA RNA nd nd
reactant thrS-infC gene nd nd
thrS-infC-rpmI-rplT-pheMST-ihfA thrS-infC-rpmI-rplT-pheMST-ihfA_mRNA
Name: thrS-infC-rpmI-rplT-pheMST-ihfA -> thrS-infC-rpmI-rplT-pheMST-ihfA_mRNA
Description: Transcription of transcription unit thrS-infC-rpmI-rplT-pheMST-ihfA; reaction inhibition by NsrR-NO.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product thrS-infC-rpmI-rplT-pheMST-ihfA_mRNA RNA nd nd
reactant thrS-infC-rpmI-rplT-pheMST-ihfA gene nd nd
tsgA tsgA_mRNA
Name: tsgA -> tsgA_mRNA
Description: Transcription of transcription unit tsgA; reaction inhibition by NsrR-NO.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product tsgA_mRNA RNA nd nd
reactant tsgA gene nd nd
waaH waaH_mRNA
Name: waaH -> waaH_mRNA
Description: Transcription of transcription unit waaH; reaction inhibition by NsrR-NO.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant waaH gene nd nd
product waaH_mRNA RNA nd nd
ydbD ydbD_mRNA
Name: ydbD -> ydbD_mRNA
Description: Transcription of transcription unit ydbD; reaction inhibition by NsrR-NO.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product ydbD_mRNA RNA nd nd
reactant ydbD gene nd nd
yeaE yeaE_mRNA
Name: yeaE -> yeaE_mRNA
Description: Transcription of transcription unit yeaE; reaction inhibition by NsrR-NO.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product yeaE_mRNA RNA nd nd
reactant yeaE gene nd nd
NsrR + [2Fe-2S]2+ NsrR-[2Fe-2S]2+
Name: NsrR + [2Fe-2S]2+ -> NsrR-[2Fe-2S]2+
Description: Reaction transforming NsrR, [2Fe-2S]2+ into NsrR-[2Fe-2S]2+
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant NsrR protein nd nd
reactant [2Fe-2S]2+ simple molecule nd nd
product NsrR-[2Fe-2S]2+ complex nd nd
hycABCDEFGHI_mRNA HycA
Name: hycABCDEFGHI_mRNA -> HycA
Description: Translation of HycA
Type: translation
Components:
Function Name Type Evidence Reference(s)
product HycA protein nd nd
reactant hycABCDEFGHI_mRNA RNA nd nd
nrfABCDEFG_mRNA NrfG
Name: nrfABCDEFG_mRNA -> NrfG
Description: Translation of NrfG
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant nrfABCDEFG_mRNA RNA nd nd
product NrfG protein nd nd
dkgB_mRNA DkgB
Name: dkgB_mRNA -> DkgB
Description: Translation of DkgB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant dkgB_mRNA RNA nd nd
product DkgB protein nd nd
acetol oxopropanal
Name: acetol -> oxopropanal
Description: Reaction transforming acetol into oxopropanal
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant acetol simple molecule nd nd
product oxopropanal simple molecule nd nd
4NBA 4NBZ
Name: 4NBA -> 4NBZ
Description: Reaction transforming 4NBA into 4NBZ
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product 4NBZ simple molecule nd nd
reactant 4NBA simple molecule nd nd
L-sorbosonate 2,5-diketo-D-gluconate
Name: L-sorbosonate -> 2,5-diketo-D-gluconate
Description: Reaction transforming L-sorbosonate into 2,5-diketo-D-gluconate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant L-sorbosonate simple molecule nd nd
product 2,5-diketo-D-gluconate simple molecule nd nd
lrp_mRNA Lrp
Name: lrp_mRNA -> Lrp
Description: Translation of Lrp
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant lrp_mRNA RNA nd nd
product Lrp protein nd nd
feaB_mRNA FeaB
Name: feaB_mRNA -> FeaB
Description: Translation of FeaB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant feaB_mRNA RNA nd nd
product FeaB protein nd nd
PAA phenylacetate
Name: PAA -> phenylacetate
Description: Reaction transforming PAA into phenylacetate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product phenylacetate simple molecule nd nd
reactant PAA simple molecule nd nd
grxD_mRNA GrxD
Name: grxD_mRNA -> GrxD
Description: Translation of GrxD
Type: translation
Components:
Function Name Type Evidence Reference(s)
product GrxD protein nd nd
reactant grxD_mRNA RNA nd nd
fliAZY_mRNA FliZ
Name: fliAZY_mRNA -> FliZ
Description: Translation of FliZ
Type: translation
Components:
Function Name Type Evidence Reference(s)
product FliZ protein nd nd
reactant fliAZY_mRNA RNA nd nd
fliAZY_mRNA FliA
Name: fliAZY_mRNA -> FliA
Description: Translation of FliA
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant fliAZY_mRNA RNA nd nd
product FliA protein nd nd
nrfABCDEFG_mRNA NrfF
Name: nrfABCDEFG_mRNA -> NrfF
Description: Translation of NrfF
Type: translation
Components:
Function Name Type Evidence Reference(s)
product NrfF protein nd nd
reactant nrfABCDEFG_mRNA RNA nd nd
hycABCDEFGHI_mRNA HycB
Name: hycABCDEFGHI_mRNA -> HycB
Description: Translation of HycB
Type: translation
Components:
Function Name Type Evidence Reference(s)
product HycB protein nd nd
reactant hycABCDEFGHI_mRNA RNA nd nd
FdhF + HycE + HycB + HycG + HycF + HycC + HycD FdhF-HycE-HycB-HycG-HycF-HycC-HycD
Name: FdhF + HycE + HycB + HycG + HycF + HycC + HycD -> FdhF-HycE-HycB-HycG-HycF-HycC-HycD
Description: Reaction transforming FdhF, HycE, HycB, HycG, HycF, HycC, HycD into FdhF-HycE-HycB-HycG-HycF-HycC-HycD
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant FdhF protein nd nd
reactant HycB protein nd nd
reactant HycE protein nd nd
reactant HycD protein nd nd
reactant HycF protein nd nd
product FdhF-HycE-HycB-HycG-HycF-HycC-HycD complex nd nd
reactant HycG protein nd nd
reactant HycC protein nd nd
formate CO2 + H2
Name: formate -> CO2 + H2
Description: Reaction transforming formate into CO2, H2
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product CO2 simple molecule nd nd
product H2 simple molecule nd nd
reactant formate simple molecule nd nd
HycD + HycC + HycF + HycG + HycB + HycE HycD-HycC-HycF-HycG-HycB-HycE
Name: HycD + HycC + HycF + HycG + HycB + HycE -> HycD-HycC-HycF-HycG-HycB-HycE
Description: Reaction transforming HycD, HycC, HycF, HycG, HycB, HycE into HycD-HycC-HycF-HycG-HycB-HycE
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant HycF protein nd nd
reactant HycE protein nd nd
reactant HycC protein nd nd
product HycD-HycC-HycF-HycG-HycB-HycE complex nd nd
reactant HycD protein nd nd
reactant HycG protein nd nd
reactant HycB protein nd nd
a reduced hydrogenase 3 H2 + an oxidized hydrogenase 3
Name: a reduced hydrogenase 3 -> H2 + an oxidized hydrogenase 3
Description: Reaction transforming a reduced hydrogenase 3 into H2, an oxidized hydrogenase 3
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product an oxidized hydrogenase 3 simple molecule nd nd
reactant a reduced hydrogenase 3 simple molecule nd nd
product H2 simple molecule nd nd
nrfABCDEFG_mRNA NrfB
Name: nrfABCDEFG_mRNA -> NrfB
Description: Translation of NrfB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant nrfABCDEFG_mRNA RNA nd nd
product NrfB protein nd nd
NrfD + NrfC + NrfB + NrfA NrfD-NrfC-NrfB-NrfA
Name: NrfD + NrfC + NrfB + NrfA -> NrfD-NrfC-NrfB-NrfA
Description: Reaction transforming NrfD, NrfC, NrfB, NrfA into NrfD-NrfC-NrfB-NrfA
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant NrfB protein nd nd
reactant NrfA protein nd nd
product NrfD-NrfC-NrfB-NrfA complex nd nd
reactant NrfC protein nd nd
reactant NrfD protein nd nd
ammonia + an oxidized cytochrome c552 nitrite + a reduced cytochrome c552
Name: ammonia + an oxidized cytochrome c552 -> nitrite + a reduced cytochrome c552
Description: Reaction transforming ammonia, an oxidized cytochrome c552 into nitrite, a reduced cytochrome c552
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant ammonia simple molecule nd nd
product a reduced cytochrome c552 simple molecule nd nd
product nitrite simple molecule nd nd
reactant an oxidized cytochrome c552 simple molecule nd nd
tehAB_mRNA TehA
Name: tehAB_mRNA -> TehA
Description: Translation of TehA
Type: translation
Components:
Function Name Type Evidence Reference(s)
product TehA protein nd nd
reactant tehAB_mRNA RNA nd nd
ethidium_Ext ethidium
Name: ethidium_Ext -> ethidium
Description: Transport of ethidium_Ext through a bacterial membrane, leading to the presence of ethidium inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant ethidium_Ext simple molecule nd nd
product ethidium simple molecule nd nd
rfe-wzzE-rffEDGHCA-wzxE-rffT-wzyE-rffM_mRNA RffE
Name: rfe-wzzE-rffEDGHCA-wzxE-rffT-wzyE-rffM_mRNA -> RffE
Description: Translation of RffE
Type: translation
Components:
Function Name Type Evidence Reference(s)
product RffE protein nd nd
reactant rfe-wzzE-rffEDGHCA-wzxE-rffT-wzyE-rffM_mRNA RNA nd nd
UDP-GlcNAc UDP-ManNAc
Name: UDP-GlcNAc -> UDP-ManNAc
Description: Reaction transforming UDP-GlcNAc into UDP-ManNAc
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant UDP-GlcNAc simple molecule nd nd
product UDP-ManNAc simple molecule nd nd
thrS-infC-rpmI-rplT-pheMST-ihfA_mRNA ThrS
Name: thrS-infC-rpmI-rplT-pheMST-ihfA_mRNA -> ThrS
Description: Translation of ThrS
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant thrS-infC-rpmI-rplT-pheMST-ihfA_mRNA RNA nd nd
product ThrS protein nd nd
tRNAthr + L-threonine L-threonyl-tRNAthr + PP
Name: tRNAthr + L-threonine -> L-threonyl-tRNAthr + PP
Description: Reaction transforming tRNAthr, L-threonine into L-threonyl-tRNAthr, PP
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product PP simple molecule nd nd
product L-threonyl-tRNAthr simple molecule nd nd
reactant L-threonine simple molecule nd nd
reactant tRNAthr simple molecule nd nd
sufABCDSE_mRNA SufD
Name: sufABCDSE_mRNA -> SufD
Description: Translation of SufD
Type: translation
Components:
Function Name Type Evidence Reference(s)
product SufD protein nd nd
reactant sufABCDSE_mRNA RNA nd nd
nrfABCDEFG_mRNA NrfA
Name: nrfABCDEFG_mRNA -> NrfA
Description: Translation of NrfA
Type: translation
Components:
Function Name Type Evidence Reference(s)
product NrfA protein nd nd
reactant nrfABCDEFG_mRNA RNA nd nd
hycABCDEFGHI_mRNA HycD
Name: hycABCDEFGHI_mRNA -> HycD
Description: Translation of HycD
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant hycABCDEFGHI_mRNA RNA nd nd
product HycD protein nd nd
sufABCDSE_mRNA SufS
Name: sufABCDSE_mRNA -> SufS
Description: Translation of SufS
Type: translation
Components:
Function Name Type Evidence Reference(s)
product SufS protein nd nd
reactant sufABCDSE_mRNA RNA nd nd
L-cysteine + a sulfur acceptor ala + S-sulfanyl-[acceptor]
Name: L-cysteine + a sulfur acceptor -> ala + S-sulfanyl-[acceptor]
Description: Reaction transforming L-cysteine, a sulfur acceptor into ala, S-sulfanyl-[acceptor]
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant L-cysteine simple molecule nd nd
product S-sulfanyl-[acceptor] simple molecule nd nd
reactant a sulfur acceptor simple molecule nd nd
product ala simple molecule nd nd
an L-cysteine desulfurase + L-cysteine an [L-cysteine desulfurase]-S-sulfanyl-L-cysteine + ala
Name: an L-cysteine desulfurase + L-cysteine -> an [L-cysteine desulfurase]-S-sulfanyl-L-cysteine + ala
Description: Reaction transforming an L-cysteine desulfurase, L-cysteine into an [L-cysteine desulfurase]-S-sulfanyl-L-cysteine, ala
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant L-cysteine simple molecule nd nd
product an [L-cysteine desulfurase]-S-sulfanyl-L-cysteine simple molecule nd nd
reactant an L-cysteine desulfurase simple molecule nd nd
product ala simple molecule nd nd
an [L-cysteine desulfurase]-S-sulfanyl-L-cysteine + a sulfur acceptor