RegulonDB RegulonDB

NarP Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
CO2 CcmA CcmB CcmC CcmD CcmE CcmF CcmG CcmH CysG FdhF FdnG FdnH FdnI Fe+2 H2 H2_Ext Hcp Hcr HyaA HyaB HyaC HyaD HyaE HyaF HycB HycC HycD HycE HycF HycG NapA NapB NapC NapD NapF NapG NapH NarP NirB NirC NirD NorV NorW NrfA NrfB NrfC NrfD NrfE NrfF NrfG phosphate S-adenosyl-L-homocysteine S-adenosyl-L-methionine YdhT YdhU YdhV YdhW YdhX YdhY YeaR YoaG YtfE a menaquinol menaquinone_Ext reduced Cytochrome C protein a reduced cytochrome c552 a reduced electron acceptor a reduced hydrogenase 3 ammonia an oxidized  c-type cytochrome an oxidized cytochrome c552 an oxidized electron acceptor an oxidized hydrogenase 3 an ubiquinol ubiquinone fdhF fdhF_mRNA fdnGHI fdnGHI_mRNA formate formate_Ext hcp-hcr hcp-hcr_mRNA hyaABCDEF hyaABCDEF_mRNA NH2OH napFDAGHBC-ccmABCDEFGH napFDAGHBC-ccmABCDEFGH_mRNA nirBDC-cysG nirBDC-cysG_mRNA nitrate NO nitrite nitrite_Ext nitrous oxide norVW norVW_mRNA nrfABCDEFG nrfABCDEFG_mRNA oxidized flavorubredoxin phosphate precorrin-1 precorrin-2 protoheme IX protoheme IX_Ext FlRd siroheme Precorrin uroporphyrinogen-III ydhYVWXUT ydhYVWXUT_mRNA yeaR-yoaG yeaR-yoaG_mRNA ytfE ytfE_mRNA Ox-Hybrid-Cluster-Proteins Red-Hybrid-Cluster-Proteins NarP phosphate FdnG FdnH FdnI NapB NapC NapH NapG NapA NrfD NrfC NrfB NrfA FdhF HycE HycB HycG HycF HycC HycD HyaA HyaB HyaC CcmC CcmE CcmD CcmB CcmA NirD NirB a reduced electron acceptor an oxidized electron acceptor


Gensor Unit       
Name: NarP
Classification:
Groups: GUs related to the two-component system
Gene Ontology Terms (GO): GO:0030091 - protein repair
GO:0036397 - formate dehydrogenase (quinone) activity
GO:0043190 - ATP-binding cassette (ABC) transporter complex
GO:0019333 - denitrification pathway
GO:0005048 - signal sequence binding
GO:0003824 - catalytic activity
GO:0004325 - ferrochelatase activity
GO:0010181 - FMN binding
GO:0016020 - membrane
GO:0016491 - oxidoreductase activity
GO:0009236 - cobalamin biosynthetic process
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Components:
Function Name Type
simple molecule |Red-Hybrid-Cluster-Proteins| simple molecule


Reactions       
Showing 86 reactions
NarP + phosphate NarP-Phosphorylated
Name: NarP + phosphate -> NarP-Phosphorylated
Description: Reaction transforming NarP, phosphate into NarP-Phosphorylated
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant phosphate simple molecule nd nd
reactant NarP protein nd nd
product NarP-Phosphorylated complex nd nd
fdhF fdhF_mRNA
Name: fdhF -> fdhF_mRNA
Description: Transcription of transcription unit fdhF; reaction activation by FhlA-Formate.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant fdhF gene nd nd
product fdhF_mRNA RNA nd nd
fdnGHI fdnGHI_mRNA
Name: fdnGHI -> fdnGHI_mRNA
Description: Transcription of transcription unit fdnGHI; reaction activation by NarL-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product fdnGHI_mRNA RNA nd nd
reactant fdnGHI gene nd nd
hcp-hcr hcp-hcr_mRNA
Name: hcp-hcr -> hcp-hcr_mRNA
Description: Transcription of transcription unit hcp-hcr; reaction activation by NarL-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product hcp-hcr_mRNA RNA nd nd
reactant hcp-hcr gene nd nd
hyaABCDEF hyaABCDEF_mRNA
Name: hyaABCDEF -> hyaABCDEF_mRNA
Description: Transcription of transcription unit hyaABCDEF; reaction activation by AppY.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product hyaABCDEF_mRNA RNA nd nd
reactant hyaABCDEF gene nd nd
napFDAGHBC-ccmABCDEFGH napFDAGHBC-ccmABCDEFGH_mRNA
Name: napFDAGHBC-ccmABCDEFGH -> napFDAGHBC-ccmABCDEFGH_mRNA
Description: Transcription of transcription unit napFDAGHBC-ccmABCDEFGH; reaction activation by FlhDC.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product napFDAGHBC-ccmABCDEFGH_mRNA RNA nd nd
reactant napFDAGHBC-ccmABCDEFGH gene nd nd
nirBDC-cysG nirBDC-cysG_mRNA
Name: nirBDC-cysG -> nirBDC-cysG_mRNA
Description: Transcription of transcription unit nirBDC-cysG; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product nirBDC-cysG_mRNA RNA nd nd
reactant nirBDC-cysG gene nd nd
norVW norVW_mRNA
Name: norVW -> norVW_mRNA
Description: Transcription of transcription unit norVW; reaction inhibition by NarL-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product norVW_mRNA RNA nd nd
reactant norVW gene nd nd
nrfABCDEFG nrfABCDEFG_mRNA
Name: nrfABCDEFG -> nrfABCDEFG_mRNA
Description: Transcription of transcription unit nrfABCDEFG; reaction activation by FlhDC.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant nrfABCDEFG gene nd nd
product nrfABCDEFG_mRNA RNA nd nd
ydhYVWXUT ydhYVWXUT_mRNA
Name: ydhYVWXUT -> ydhYVWXUT_mRNA
Description: Transcription of transcription unit ydhYVWXUT; reaction inhibition by NarL-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant ydhYVWXUT gene nd nd
product ydhYVWXUT_mRNA RNA nd nd
yeaR-yoaG yeaR-yoaG_mRNA
Name: yeaR-yoaG -> yeaR-yoaG_mRNA
Description: Transcription of transcription unit yeaR-yoaG; reaction activation by NarL-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant yeaR-yoaG gene nd nd
product yeaR-yoaG_mRNA RNA nd nd
ytfE ytfE_mRNA
Name: ytfE -> ytfE_mRNA
Description: Transcription of transcription unit ytfE; reaction activation by NarL-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant ytfE gene nd nd
product ytfE_mRNA RNA nd nd
fdnGHI_mRNA FdnG
Name: fdnGHI_mRNA -> FdnG
Description: Translation of FdnG
Type: translation
Components:
Function Name Type Evidence Reference(s)
product FdnG protein nd nd
reactant fdnGHI_mRNA RNA nd nd
FdnG + FdnH + FdnI FdnG-FdnH-FdnI
Name: FdnG + FdnH + FdnI -> FdnG-FdnH-FdnI
Description: Reaction transforming FdnG, FdnH, FdnI into FdnG-FdnH-FdnI
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant FdnI protein nd nd
reactant FdnG protein nd nd
product FdnG-FdnH-FdnI complex nd nd
reactant FdnH protein nd nd
formate_Ext + menaquinone_Ext CO2 + a menaquinol
Name: formate_Ext + menaquinone_Ext -> CO2 + a menaquinol
Description: Transport of formate_Ext, menaquinone_Ext through a bacterial membrane, leading to the presence of CO2, a menaquinol inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product CO2 simple molecule nd nd
reactant menaquinone_Ext simple molecule nd nd
product a menaquinol simple molecule nd nd
reactant formate_Ext simple molecule nd nd
napFDAGHBC-ccmABCDEFGH_mRNA NapC
Name: napFDAGHBC-ccmABCDEFGH_mRNA -> NapC
Description: Translation of NapC
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant napFDAGHBC-ccmABCDEFGH_mRNA RNA nd nd
product NapC protein nd nd
NapB + NapC + NapH + NapG + NapA NapB-NapC-NapH-NapG-NapA
Name: NapB + NapC + NapH + NapG + NapA -> NapB-NapC-NapH-NapG-NapA
Description: Reaction transforming NapB, NapC, NapH, NapG, NapA into NapB-NapC-NapH-NapG-NapA
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant NapG protein nd nd
reactant NapB protein nd nd
product NapB-NapC-NapH-NapG-NapA complex nd nd
reactant NapA protein nd nd
reactant NapH protein nd nd
reactant NapC protein nd nd
nitrate + an ubiquinol nitrite + ubiquinone
Name: nitrate + an ubiquinol -> nitrite + ubiquinone
Description: Reaction transforming nitrate, an ubiquinol into nitrite, ubiquinone
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product ubiquinone simple molecule nd nd
reactant an ubiquinol simple molecule nd nd
reactant nitrate simple molecule nd nd
product nitrite simple molecule nd nd
nirBDC-cysG_mRNA NirC
Name: nirBDC-cysG_mRNA -> NirC
Description: Translation of NirC
Type: translation
Components:
Function Name Type Evidence Reference(s)
product NirC protein nd nd
reactant nirBDC-cysG_mRNA RNA nd nd
nitrite_Ext nitrite
Name: nitrite_Ext -> nitrite
Description: Transport of nitrite_Ext through a bacterial membrane, leading to the presence of nitrite inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant nitrite_Ext simple molecule nd nd
product nitrite simple molecule nd nd
nrfABCDEFG_mRNA NrfE
Name: nrfABCDEFG_mRNA -> NrfE
Description: Translation of NrfE
Type: translation
Components:
Function Name Type Evidence Reference(s)
product NrfE protein nd nd
reactant nrfABCDEFG_mRNA RNA nd nd
ydhYVWXUT_mRNA YdhT
Name: ydhYVWXUT_mRNA -> YdhT
Description: Translation of YdhT
Type: translation
Components:
Function Name Type Evidence Reference(s)
product YdhT protein nd nd
reactant ydhYVWXUT_mRNA RNA nd nd
yeaR-yoaG_mRNA YoaG
Name: yeaR-yoaG_mRNA -> YoaG
Description: Translation of YoaG
Type: translation
Components:
Function Name Type Evidence Reference(s)
product YoaG protein nd nd
reactant yeaR-yoaG_mRNA RNA nd nd
hyaABCDEF_mRNA HyaD
Name: hyaABCDEF_mRNA -> HyaD
Description: Translation of HyaD
Type: translation
Components:
Function Name Type Evidence Reference(s)
product HyaD protein nd nd
reactant hyaABCDEF_mRNA RNA nd nd
hyaABCDEF_mRNA HyaE
Name: hyaABCDEF_mRNA -> HyaE
Description: Translation of HyaE
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant hyaABCDEF_mRNA RNA nd nd
product HyaE protein nd nd
nrfABCDEFG_mRNA NrfG
Name: nrfABCDEFG_mRNA -> NrfG
Description: Translation of NrfG
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant nrfABCDEFG_mRNA RNA nd nd
product NrfG protein nd nd
norVW_mRNA NorV
Name: norVW_mRNA -> NorV
Description: Translation of NorV
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant norVW_mRNA RNA nd nd
product NorV protein nd nd
nitrous oxide + an oxidized c-type cytochrome NO + reduced Cytochrome C protein
Name: nitrous oxide + an oxidized c-type cytochrome -> NO + reduced Cytochrome C protein
Description: Reaction transforming nitrous oxide, an oxidized c-type cytochrome into NO, reduced Cytochrome C protein
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product NO simple molecule nd nd
reactant nitrous oxide simple molecule nd nd
product reduced Cytochrome C protein simple molecule nd nd
reactant an oxidized c-type cytochrome simple molecule nd nd
ydhYVWXUT_mRNA YdhU
Name: ydhYVWXUT_mRNA -> YdhU
Description: Translation of YdhU
Type: translation
Components:
Function Name Type Evidence Reference(s)
product YdhU protein nd nd
reactant ydhYVWXUT_mRNA RNA nd nd
nrfABCDEFG_mRNA NrfD
Name: nrfABCDEFG_mRNA -> NrfD
Description: Translation of NrfD
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant nrfABCDEFG_mRNA RNA nd nd
product NrfD protein nd nd
NrfD + NrfC + NrfB + NrfA NrfD-NrfC-NrfB-NrfA
Name: NrfD + NrfC + NrfB + NrfA -> NrfD-NrfC-NrfB-NrfA
Description: Reaction transforming NrfD, NrfC, NrfB, NrfA into NrfD-NrfC-NrfB-NrfA
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant NrfB protein nd nd
reactant NrfA protein nd nd
product NrfD-NrfC-NrfB-NrfA complex nd nd
reactant NrfC protein nd nd
reactant NrfD protein nd nd
ammonia + an oxidized cytochrome c552 nitrite + a reduced cytochrome c552
Name: ammonia + an oxidized cytochrome c552 -> nitrite + a reduced cytochrome c552
Description: Reaction transforming ammonia, an oxidized cytochrome c552 into nitrite, a reduced cytochrome c552
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant ammonia simple molecule nd nd
product a reduced cytochrome c552 simple molecule nd nd
product nitrite simple molecule nd nd
reactant an oxidized cytochrome c552 simple molecule nd nd
fdhF_mRNA FdhF
Name: fdhF_mRNA -> FdhF
Description: Translation of FdhF
Type: translation
Components:
Function Name Type Evidence Reference(s)
product FdhF protein nd nd
reactant fdhF_mRNA RNA nd nd
FdhF + HycE + HycB + HycG + HycF + HycC + HycD FdhF-HycE-HycB-HycG-HycF-HycC-HycD
Name: FdhF + HycE + HycB + HycG + HycF + HycC + HycD -> FdhF-HycE-HycB-HycG-HycF-HycC-HycD
Description: Reaction transforming FdhF, HycE, HycB, HycG, HycF, HycC, HycD into FdhF-HycE-HycB-HycG-HycF-HycC-HycD
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant FdhF protein nd nd
reactant HycB protein nd nd
reactant HycE protein nd nd
reactant HycD protein nd nd
reactant HycF protein nd nd
product FdhF-HycE-HycB-HycG-HycF-HycC-HycD complex nd nd
reactant HycG protein nd nd
reactant HycC protein nd nd
formate CO2 + H2
Name: formate -> CO2 + H2
Description: Reaction transforming formate into CO2, H2
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product CO2 simple molecule nd nd
product H2 simple molecule nd nd
reactant formate simple molecule nd nd
formate + an oxidized hydrogenase 3 CO2 + a reduced hydrogenase 3
Name: formate + an oxidized hydrogenase 3 -> CO2 + a reduced hydrogenase 3
Description: Reaction transforming formate, an oxidized hydrogenase 3 into CO2, a reduced hydrogenase 3
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant an oxidized hydrogenase 3 simple molecule nd nd
product CO2 simple molecule nd nd
product a reduced hydrogenase 3 simple molecule nd nd
reactant formate simple molecule nd nd
formate + an oxidized electron acceptor CO2 + a reduced electron acceptor
Name: formate + an oxidized electron acceptor -> CO2 + a reduced electron acceptor
Description: Reaction transforming formate, an oxidized electron acceptor into CO2, a reduced electron acceptor
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product a reduced electron acceptor simple molecule nd nd
product CO2 simple molecule nd nd
reactant an oxidized electron acceptor simple molecule nd nd
reactant formate simple molecule nd nd
hcp-hcr_mRNA Hcr
Name: hcp-hcr_mRNA -> Hcr
Description: Translation of Hcr
Type: translation
Components:
Function Name Type Evidence Reference(s)
product Hcr protein nd nd
reactant hcp-hcr_mRNA RNA nd nd
|Ox-Hybrid-Cluster-Proteins| |Red-Hybrid-Cluster-Proteins|
Name: |Ox-Hybrid-Cluster-Proteins| -> |Red-Hybrid-Cluster-Proteins|
Description: Reaction transforming |Ox-Hybrid-Cluster-Proteins| into |Red-Hybrid-Cluster-Proteins|
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product |Red-Hybrid-Cluster-Proteins| simple molecule nd nd
reactant |Ox-Hybrid-Cluster-Proteins| simple molecule nd nd
napFDAGHBC-ccmABCDEFGH_mRNA NapF
Name: napFDAGHBC-ccmABCDEFGH_mRNA -> NapF
Description: Translation of NapF
Type: translation
Components:
Function Name Type Evidence Reference(s)
product NapF protein nd nd
reactant napFDAGHBC-ccmABCDEFGH_mRNA RNA nd nd
hyaABCDEF_mRNA HyaC
Name: hyaABCDEF_mRNA -> HyaC
Description: Translation of HyaC
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant hyaABCDEF_mRNA RNA nd nd
product HyaC protein nd nd
HyaA + HyaB + HyaC HyaA-HyaB-HyaC
Name: HyaA + HyaB + HyaC -> HyaA-HyaB-HyaC
Description: Reaction transforming HyaA, HyaB, HyaC into HyaA-HyaB-HyaC
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant HyaA protein nd nd
product HyaA-HyaB-HyaC complex nd nd
reactant HyaB protein nd nd
reactant HyaC protein nd nd
menaquinone_Ext + H2_Ext a menaquinol
Name: menaquinone_Ext + H2_Ext -> a menaquinol
Description: Transport of menaquinone_Ext, H2_Ext through a bacterial membrane, leading to the presence of a menaquinol inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant H2_Ext simple molecule nd nd
reactant menaquinone_Ext simple molecule nd nd
product a menaquinol simple molecule nd nd
hyaABCDEF_mRNA HyaF
Name: hyaABCDEF_mRNA -> HyaF
Description: Translation of HyaF
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant hyaABCDEF_mRNA RNA nd nd
product HyaF protein nd nd
napFDAGHBC-ccmABCDEFGH_mRNA CcmC
Name: napFDAGHBC-ccmABCDEFGH_mRNA -> CcmC
Description: Translation of CcmC
Type: translation
Components:
Function Name Type Evidence Reference(s)
product CcmC protein nd nd
reactant napFDAGHBC-ccmABCDEFGH_mRNA RNA nd nd
CcmC + CcmE + CcmD + CcmB + CcmA CcmC-CcmE-CcmD-CcmB-CcmA
Name: CcmC + CcmE + CcmD + CcmB + CcmA -> CcmC-CcmE-CcmD-CcmB-CcmA
Description: Reaction transforming CcmC, CcmE, CcmD, CcmB, CcmA into CcmC-CcmE-CcmD-CcmB-CcmA
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product CcmC-CcmE-CcmD-CcmB-CcmA complex nd nd
reactant CcmD protein nd nd
reactant CcmA protein nd nd
reactant CcmB protein nd nd
reactant CcmE protein nd nd
reactant CcmC protein nd nd
protoheme IX_Ext phosphate + protoheme IX
Name: protoheme IX_Ext -> phosphate + protoheme IX
Description: Transport of protoheme IX_Ext through a bacterial membrane, leading to the presence of phosphate, protoheme IX inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product protoheme IX simple molecule nd nd
reactant protoheme IX_Ext simple molecule nd nd
product phosphate simple molecule nd nd
napFDAGHBC-ccmABCDEFGH_mRNA CcmE
Name: napFDAGHBC-ccmABCDEFGH_mRNA -> CcmE
Description: Translation of CcmE
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant napFDAGHBC-ccmABCDEFGH_mRNA RNA nd nd
product CcmE protein nd nd
napFDAGHBC-ccmABCDEFGH_mRNA CcmD
Name: napFDAGHBC-ccmABCDEFGH_mRNA -> CcmD
Description: Translation of CcmD
Type: translation
Components:
Function Name Type Evidence Reference(s)
product CcmD protein nd nd
reactant napFDAGHBC-ccmABCDEFGH_mRNA RNA nd nd
nrfABCDEFG_mRNA NrfF
Name: nrfABCDEFG_mRNA -> NrfF
Description: Translation of NrfF
Type: translation
Components:
Function Name Type Evidence Reference(s)
product NrfF protein nd nd
reactant nrfABCDEFG_mRNA RNA nd nd
norVW_mRNA NorW
Name: norVW_mRNA -> NorW
Description: Translation of NorW
Type: translation
Components:
Function Name Type Evidence Reference(s)
product NorW protein nd nd
reactant norVW_mRNA RNA nd nd
oxidized flavorubredoxin + NO FlRd + nitrous oxide
Name: oxidized flavorubredoxin + NO -> FlRd + nitrous oxide
Description: Reaction transforming oxidized flavorubredoxin, NO into FlRd, nitrous oxide
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant oxidized flavorubredoxin simple molecule nd nd
product FlRd simple molecule nd nd
reactant NO simple molecule nd nd
product nitrous oxide simple molecule nd nd
nrfABCDEFG_mRNA NrfB
Name: nrfABCDEFG_mRNA -> NrfB
Description: Translation of NrfB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant nrfABCDEFG_mRNA RNA nd nd
product NrfB protein nd nd
fdnGHI_mRNA FdnH
Name: fdnGHI_mRNA -> FdnH
Description: Translation of FdnH
Type: translation
Components:
Function Name Type Evidence Reference(s)
product FdnH protein nd nd
reactant fdnGHI_mRNA RNA nd nd
ydhYVWXUT_mRNA YdhX
Name: ydhYVWXUT_mRNA -> YdhX
Description: Translation of YdhX
Type: translation
Components:
Function Name Type Evidence Reference(s)
product YdhX protein nd nd
reactant ydhYVWXUT_mRNA RNA nd nd
napFDAGHBC-ccmABCDEFGH_mRNA NapG
Name: napFDAGHBC-ccmABCDEFGH_mRNA -> NapG
Description: Translation of NapG
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant napFDAGHBC-ccmABCDEFGH_mRNA RNA nd nd
product NapG protein nd nd
nrfABCDEFG_mRNA NrfA
Name: nrfABCDEFG_mRNA -> NrfA
Description: Translation of NrfA
Type: translation
Components:
Function Name Type Evidence Reference(s)
product NrfA protein nd nd
reactant nrfABCDEFG_mRNA RNA nd nd
napFDAGHBC-ccmABCDEFGH_mRNA CcmG
Name: napFDAGHBC-ccmABCDEFGH_mRNA -> CcmG
Description: Translation of CcmG
Type: translation
Components:
Function Name Type Evidence Reference(s)
product CcmG protein nd nd
reactant napFDAGHBC-ccmABCDEFGH_mRNA RNA nd nd
hyaABCDEF_mRNA HyaA
Name: hyaABCDEF_mRNA -> HyaA
Description: Translation of HyaA
Type: translation
Components:
Function Name Type Evidence Reference(s)
product HyaA protein nd nd
reactant hyaABCDEF_mRNA RNA nd nd
napFDAGHBC-ccmABCDEFGH_mRNA NapA
Name: napFDAGHBC-ccmABCDEFGH_mRNA -> NapA
Description: Translation of NapA
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant napFDAGHBC-ccmABCDEFGH_mRNA RNA nd nd
product NapA protein nd nd
napFDAGHBC-ccmABCDEFGH_mRNA NapD
Name: napFDAGHBC-ccmABCDEFGH_mRNA -> NapD
Description: Translation of NapD
Type: translation
Components:
Function Name Type Evidence Reference(s)
product NapD protein nd nd
reactant napFDAGHBC-ccmABCDEFGH_mRNA RNA nd nd
napFDAGHBC-ccmABCDEFGH_mRNA NapB
Name: napFDAGHBC-ccmABCDEFGH_mRNA -> NapB
Description: Translation of NapB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant napFDAGHBC-ccmABCDEFGH_mRNA RNA nd nd
product NapB protein nd nd
yeaR-yoaG_mRNA YeaR
Name: yeaR-yoaG_mRNA -> YeaR
Description: Translation of YeaR
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant yeaR-yoaG_mRNA RNA nd nd
product YeaR protein nd nd
napFDAGHBC-ccmABCDEFGH_mRNA NapH
Name: napFDAGHBC-ccmABCDEFGH_mRNA -> NapH
Description: Translation of NapH
Type: translation
Components:
Function Name Type Evidence Reference(s)
product NapH protein nd nd
reactant napFDAGHBC-ccmABCDEFGH_mRNA RNA nd nd
nirBDC-cysG_mRNA CysG
Name: nirBDC-cysG_mRNA -> CysG
Description: Translation of CysG
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant nirBDC-cysG_mRNA RNA nd nd
product CysG protein nd nd
S-adenosyl-L-methionine + precorrin-1 S-adenosyl-L-homocysteine + precorrin-2
Name: S-adenosyl-L-methionine + precorrin-1 -> S-adenosyl-L-homocysteine + precorrin-2
Description: Reaction transforming S-adenosyl-L-methionine, precorrin-1 into S-adenosyl-L-homocysteine, precorrin-2
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product S-adenosyl-L-homocysteine simple molecule nd nd
product precorrin-2 simple molecule nd nd
reactant S-adenosyl-L-methionine simple molecule nd nd
reactant precorrin-1 simple molecule nd nd
S-adenosyl-L-methionine + uroporphyrinogen-III S-adenosyl-L-homocysteine + precorrin-1
Name: S-adenosyl-L-methionine + uroporphyrinogen-III -> S-adenosyl-L-homocysteine + precorrin-1
Description: Reaction transforming S-adenosyl-L-methionine, uroporphyrinogen-III into S-adenosyl-L-homocysteine, precorrin-1
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant uroporphyrinogen-III simple molecule nd nd
product S-adenosyl-L-homocysteine simple molecule nd nd
reactant S-adenosyl-L-methionine simple molecule nd nd
product precorrin-1 simple molecule nd nd
precorrin-2 Precorrin
Name: precorrin-2 -> Precorrin
Description: Reaction transforming precorrin-2 into Precorrin
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product Precorrin simple molecule nd nd
reactant precorrin-2 simple molecule nd nd
Precorrin + Fe(II) siroheme
Name: Precorrin + Fe(II) -> siroheme
Description: Reaction transforming Precorrin, Fe(II) into siroheme
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant Precorrin simple molecule nd nd
reactant Fe(II) simple molecule nd nd
product siroheme simple molecule nd nd
napFDAGHBC-ccmABCDEFGH_mRNA CcmF
Name: napFDAGHBC-ccmABCDEFGH_mRNA -> CcmF
Description: Translation of CcmF
Type: translation
Components:
Function Name Type Evidence Reference(s)
product CcmF protein nd nd
reactant napFDAGHBC-ccmABCDEFGH_mRNA RNA nd nd
ydhYVWXUT_mRNA YdhV
Name: ydhYVWXUT_mRNA -> YdhV
Description: Translation of YdhV
Type: translation
Components:
Function Name Type Evidence Reference(s)
product YdhV protein nd nd
reactant ydhYVWXUT_mRNA RNA nd nd
hcp-hcr_mRNA Hcp
Name: hcp-hcr_mRNA -> Hcp
Description: Translation of Hcp
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant hcp-hcr_mRNA RNA nd nd
product Hcp protein nd nd
ammonia + an oxidized electron acceptor a reduced electron acceptor + NH2OH
Name: ammonia + an oxidized electron acceptor -> a reduced electron acceptor + NH2OH
Description: Reaction transforming ammonia, an oxidized electron acceptor into a reduced electron acceptor, NH2OH
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant ammonia simple molecule nd nd
product a reduced electron acceptor simple molecule nd nd
reactant an oxidized electron acceptor simple molecule nd nd
product NH2OH simple molecule nd nd
ytfE_mRNA YtfE
Name: ytfE_mRNA -> YtfE
Description: Translation of YtfE
Type: translation
Components:
Function Name Type Evidence Reference(s)
product YtfE protein nd nd
reactant ytfE_mRNA RNA nd nd
napFDAGHBC-ccmABCDEFGH_mRNA CcmB
Name: napFDAGHBC-ccmABCDEFGH_mRNA -> CcmB
Description: Translation of CcmB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant napFDAGHBC-ccmABCDEFGH_mRNA RNA nd nd
product CcmB protein nd nd
nirBDC-cysG_mRNA NirD
Name: nirBDC-cysG_mRNA -> NirD
Description: Translation of NirD
Type: translation
Components:
Function Name Type Evidence Reference(s)
product NirD protein nd nd
reactant nirBDC-cysG_mRNA RNA nd nd