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MlrA Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
CadC CsgD CsgE CsgF CsgG IbaG MlrA RplU RpmA cadC cadC_mRNA csgDEFG csgDEFG_mRNA CsgA CsgA_Ext ibaG ibaG_mRNA rplU-rpmA rplU-rpmA_mRNA CsgG CsgE CsgF


Gensor Unit       
Name: MlrA
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): GO:0030529 - intracellular ribonucleoprotein complex
GO:0003700 - transcription factor activity, sequence-specific DNA binding
GO:0000986 - bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding
GO:0016020 - membrane
GO:0044010 - single-species biofilm formation
GO:0003735 - structural constituent of ribosome
GO:2000144 - positive regulation of DNA-templated transcription, initiation
GO:0019843 - rRNA binding
GO:0022625 - cytosolic large ribosomal subunit
GO:0003677 - DNA binding
GO:0005840 - ribosome
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Components:
Function Name Type
RNA rplU-rpmA_mRNA RNA


Reactions       
Showing 14 reactions
cadC cadC_mRNA
Name: cadC -> cadC_mRNA
Description: Transcription of transcription unit cadC; reaction activation by CadC.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant cadC gene nd nd
product cadC_mRNA RNA nd nd
csgDEFG csgDEFG_mRNA
Name: csgDEFG -> csgDEFG_mRNA
Description: Transcription of transcription unit csgDEFG; reaction activation by BasR-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product csgDEFG_mRNA RNA nd nd
reactant csgDEFG gene nd nd
ibaG ibaG_mRNA
Name: ibaG -> ibaG_mRNA
Description: Transcription of transcription unit ibaG; reaction activation by MlrA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant ibaG gene nd nd
product ibaG_mRNA RNA nd nd
rplU-rpmA rplU-rpmA_mRNA
Name: rplU-rpmA -> rplU-rpmA_mRNA
Description: Transcription of transcription unit rplU-rpmA; reaction activation by MlrA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product rplU-rpmA_mRNA RNA nd nd
reactant rplU-rpmA gene nd nd
csgDEFG_mRNA CsgF
Name: csgDEFG_mRNA -> CsgF
Description: Translation of CsgF
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant csgDEFG_mRNA RNA nd nd
product CsgF protein nd nd
CsgG + CsgE + CsgF CsgG-CsgE-CsgF
Name: CsgG + CsgE + CsgF -> CsgG-CsgE-CsgF
Description: Reaction transforming CsgG, CsgE, CsgF into CsgG-CsgE-CsgF
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product CsgG-CsgE-CsgF complex nd nd
reactant CsgF protein nd nd
reactant CsgG protein nd nd
reactant CsgE protein nd nd
CsgA_Ext CsgA
Name: CsgA_Ext -> CsgA
Description: Transport of CsgA_Ext through a bacterial membrane, leading to the presence of CsgA inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant CsgA_Ext simple molecule nd nd
product CsgA simple molecule nd nd
ibaG_mRNA IbaG
Name: ibaG_mRNA -> IbaG
Description: Translation of IbaG
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant ibaG_mRNA RNA nd nd
product IbaG protein nd nd
rplU-rpmA_mRNA RplU
Name: rplU-rpmA_mRNA -> RplU
Description: Translation of RplU
Type: translation
Components:
Function Name Type Evidence Reference(s)
product RplU protein nd nd
reactant rplU-rpmA_mRNA RNA nd nd
rplU-rpmA_mRNA RpmA
Name: rplU-rpmA_mRNA -> RpmA
Description: Translation of RpmA
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant rplU-rpmA_mRNA RNA nd nd
product RpmA protein nd nd
cadC_mRNA CadC
Name: cadC_mRNA -> CadC
Description: Translation of CadC
Type: translation
Components:
Function Name Type Evidence Reference(s)
product CadC protein nd nd
reactant cadC_mRNA RNA nd nd
csgDEFG_mRNA CsgD
Name: csgDEFG_mRNA -> CsgD
Description: Translation of CsgD
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant csgDEFG_mRNA RNA nd nd
product CsgD protein nd nd
csgDEFG_mRNA CsgG
Name: csgDEFG_mRNA -> CsgG
Description: Translation of CsgG
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant csgDEFG_mRNA RNA nd nd
product CsgG protein nd nd
csgDEFG_mRNA CsgE
Name: csgDEFG_mRNA -> CsgE
Description: Translation of CsgE
Type: translation
Components:
Function Name Type Evidence Reference(s)
product CsgE protein nd nd
reactant csgDEFG_mRNA RNA nd nd



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