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MarR Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
2,4-DNP benzoate MarA MarB MarR menadione paraquat Phenazine methosulfate Plumbagin Sodium salicylate marRAB marRAB_mRNA SA MarR Sodium salicylate MarR menadione MarR Phenazine methosulfate MarR Plumbagin MarR 2,4-DNP MarR benzoate MarR SA MarR paraquat


Gensor Unit       
Name: MarR
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): biological_process GO:0071236 - cellular response to antibiotic
GO:0045892 - negative regulation of transcription, DNA-templated
GO:0045893 - positive regulation of transcription, DNA-templated
GO:0009408 - response to heat
cellular_component GO:0030288 - outer membrane-bounded periplasmic space
molecular_function GO:0003677 - DNA binding
GO:0005515 - protein binding
GO:0044212 - transcription regulatory region DNA binding
Components: Show/Hide Components Table (21 more...)
Function Name Type
simple_molecule 2,4-DNP simple_molecule
simple_molecule 2-HBA simple_molecule
protein MarA protein
protein MarB protein
protein MarR protein
complex MarR-2,4-DNP complex
complex MarR-2-HBA complex
complex MarR-benzoate complex
complex MarR-menadione complex
complex MarR-paraquat complex
complex MarR-phenazine methosulfate complex
complex MarR-plumbagin complex
complex MarR-sodium salicylate complex
simple_molecule benzoate simple_molecule
gene marRAB gene
RNA marRAB_mRNA RNA
simple_molecule menadione simple_molecule
simple_molecule paraquat simple_molecule
simple_molecule phenazine methosulfate simple_molecule
simple_molecule plumbagin simple_molecule
simple_molecule sodium salicylate simple_molecule


Reactions       
Showing 12 reactions
MarR marRAB marRAB_mRNA
Name: marRAB -> marRAB_mRNA
Description: Transcription of transcription unit marRAB. Reaction inhibition by MarR.
Type: transcription
Pathway Components: marRAB - MarR -> marRAB_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor MarR protein nd nd
reactant marRAB gene nd nd
product marRAB_mRNA RNA nd nd
2,4-DNP + MarR MarR-2,4-DNP
Name: 2,4-DNP + MarR -> MarR-2,4-DNP
Description: Reaction transforming 2,4-DNP, MarR into MarR-2,4-DNP
Type: state transition
Pathway Components: 2,4-DNP + MarR -> MarR-2,4-DNP
Components:
Function Name Type Evidence Reference(s)
reactant 2,4-DNP simple_molecule nd nd
reactant MarR protein nd nd
product MarR-2,4-DNP complex nd nd
benzoate + MarR MarR-benzoate
Name: benzoate + MarR -> MarR-benzoate
Description: Reaction transforming benzoate, MarR into MarR-benzoate
Type: state transition
Pathway Components: benzoate + MarR -> MarR-benzoate
Components:
Function Name Type Evidence Reference(s)
reactant MarR protein nd nd
product MarR-benzoate complex nd nd
reactant benzoate simple_molecule nd nd
menadione + MarR MarR-menadione
Name: menadione + MarR -> MarR-menadione
Description: Reaction transforming menadione, MarR into MarR-menadione
Type: state transition
Pathway Components: menadione + MarR -> MarR-menadione
Components:
Function Name Type Evidence Reference(s)
reactant MarR protein nd nd
product MarR-menadione complex nd nd
reactant menadione simple_molecule nd nd
paraquat + MarR MarR-paraquat
Name: paraquat + MarR -> MarR-paraquat
Description: Reaction transforming paraquat, MarR into MarR-paraquat
Type: state transition
Pathway Components: paraquat + MarR -> MarR-paraquat
Components:
Function Name Type Evidence Reference(s)
reactant MarR protein nd nd
product MarR-paraquat complex nd nd
reactant paraquat simple_molecule nd nd
phenazine methosulfate + MarR MarR-phenazine methosulfate
Name: phenazine methosulfate + MarR -> MarR-phenazine methosulfate
Description: Reaction transforming phenazine methosulfate, MarR into MarR-phenazine methosulfate
Type: state transition
Pathway Components: phenazine methosulfate + MarR -> MarR-phenazine methosulfate
Components:
Function Name Type Evidence Reference(s)
reactant MarR protein nd nd
product MarR-phenazine methosulfate complex nd nd
reactant phenazine methosulfate simple_molecule nd nd
plumbagin + MarR MarR-plumbagin
Name: plumbagin + MarR -> MarR-plumbagin
Description: Reaction transforming plumbagin, MarR into MarR-plumbagin
Type: state transition
Pathway Components: plumbagin + MarR -> MarR-plumbagin
Components:
Function Name Type Evidence Reference(s)
reactant MarR protein nd nd
product MarR-plumbagin complex nd nd
reactant plumbagin simple_molecule nd nd
sodium salicylate + MarR MarR-sodium salicylate
Name: sodium salicylate + MarR -> MarR-sodium salicylate
Description: Reaction transforming sodium salicylate, MarR into MarR-sodium salicylate
Type: state transition
Pathway Components: sodium salicylate + MarR -> MarR-sodium salicylate
Components:
Function Name Type Evidence Reference(s)
reactant MarR protein nd nd
product MarR-sodium salicylate complex nd nd
reactant sodium salicylate simple_molecule nd nd
2-HBA + MarR MarR-2-HBA
Name: 2-HBA + MarR -> MarR-2-HBA
Description: Reaction transforming 2-HBA, MarR into MarR-2-HBA
Type: state transition
Pathway Components: 2-HBA + MarR -> MarR-2-HBA
Components:
Function Name Type Evidence Reference(s)
reactant 2-HBA simple_molecule nd nd
reactant MarR protein nd nd
product MarR-2-HBA complex nd nd
marRAB_mRNA MarR
Name: marRAB_mRNA -> MarR
Description: Translation of MarR
Type: translation
Pathway Components: marRAB_mRNA -> MarR
Components:
Function Name Type Evidence Reference(s)
product MarR protein nd nd
reactant marRAB_mRNA RNA nd nd
marRAB_mRNA MarA
Name: marRAB_mRNA -> MarA
Description: Translation of MarA
Type: translation
Pathway Components: marRAB_mRNA -> MarA
Components:
Function Name Type Evidence Reference(s)
product MarA protein nd nd
reactant marRAB_mRNA RNA nd nd
marRAB_mRNA MarB
Name: marRAB_mRNA -> MarB
Description: Translation of MarB
Type: translation
Pathway Components: marRAB_mRNA -> MarB
Components:
Function Name Type Evidence Reference(s)
product MarB protein nd nd
reactant marRAB_mRNA RNA nd nd



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