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MarR Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
2,4-DNP benzoate MarA MarB MarR menadione paraquat Phenazine methosulfate Plumbagin Sodium salicylate marRAB marRAB_mRNA SA MarR Sodium salicylate MarR menadione MarR Phenazine methosulfate MarR Plumbagin MarR 2,4-DNP MarR benzoate MarR SA MarR paraquat


Gensor Unit       
Name: MarR
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): GO:0003700 - transcription factor activity, sequence-specific DNA binding
GO:0045892 - negative regulation of transcription, DNA-templated
GO:0005622 - intracellular
GO:0071236 - cellular response to antibiotic
GO:0046677 - response to antibiotic
GO:0045893 - positive regulation of transcription, DNA-templated
GO:0003677 - DNA binding
GO:0006351 - transcription, DNA-templated
GO:0043565 - sequence-specific DNA binding
GO:0030288 - outer membrane-bounded periplasmic space
GO:0009408 - response to heat
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Components:
Function Name Type
simple molecule SA simple molecule


Reactions       
Showing 12 reactions
marRAB marRAB_mRNA
Name: marRAB -> marRAB_mRNA
Description: Transcription of transcription unit marRAB; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant marRAB gene nd nd
product marRAB_mRNA RNA nd nd
MarR + Sodium salicylate MarR-Sodium salicylate
Name: MarR + Sodium salicylate -> MarR-Sodium salicylate
Description: Reaction transforming MarR, Sodium salicylate into MarR-Sodium salicylate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product MarR-Sodium salicylate complex nd nd
reactant Sodium salicylate simple molecule nd nd
reactant MarR protein nd nd
MarR + menadione MarR-menadione
Name: MarR + menadione -> MarR-menadione
Description: Reaction transforming MarR, menadione into MarR-menadione
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant MarR protein nd nd
reactant menadione simple molecule nd nd
product MarR-menadione complex nd nd
MarR + Phenazine methosulfate MarR-Phenazine methosulfate
Name: MarR + Phenazine methosulfate -> MarR-Phenazine methosulfate
Description: Reaction transforming MarR, Phenazine methosulfate into MarR-Phenazine methosulfate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant Phenazine methosulfate simple molecule nd nd
reactant MarR protein nd nd
product MarR-Phenazine methosulfate complex nd nd
MarR + Plumbagin MarR-Plumbagin
Name: MarR + Plumbagin -> MarR-Plumbagin
Description: Reaction transforming MarR, Plumbagin into MarR-Plumbagin
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant Plumbagin simple molecule nd nd
reactant MarR protein nd nd
product MarR-Plumbagin complex nd nd
MarR + 2,4-DNP MarR-2,4-DNP
Name: MarR + 2,4-DNP -> MarR-2,4-DNP
Description: Reaction transforming MarR, 2,4-DNP into MarR-2,4-DNP
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product MarR-2,4-DNP complex nd nd
reactant 2,4-DNP simple molecule nd nd
reactant MarR protein nd nd
MarR + benzoate MarR-benzoate
Name: MarR + benzoate -> MarR-benzoate
Description: Reaction transforming MarR, benzoate into MarR-benzoate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product MarR-benzoate complex nd nd
reactant benzoate simple molecule nd nd
reactant MarR protein nd nd
MarR + SA MarR-SA
Name: MarR + SA -> MarR-SA
Description: Reaction transforming MarR, SA into MarR-SA
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant SA simple molecule nd nd
product MarR-SA complex nd nd
reactant MarR protein nd nd
MarR + paraquat MarR-paraquat
Name: MarR + paraquat -> MarR-paraquat
Description: Reaction transforming MarR, paraquat into MarR-paraquat
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant paraquat simple molecule nd nd
product MarR-paraquat complex nd nd
reactant MarR protein nd nd
marRAB_mRNA MarA
Name: marRAB_mRNA -> MarA
Description: Translation of MarA
Type: translation
Components:
Function Name Type Evidence Reference(s)
product MarA protein nd nd
reactant marRAB_mRNA RNA nd nd
marRAB_mRNA MarB
Name: marRAB_mRNA -> MarB
Description: Translation of MarB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant marRAB_mRNA RNA nd nd
product MarB protein nd nd
marRAB_mRNA MarR
Name: marRAB_mRNA -> MarR
Description: Translation of MarR
Type: translation
Components:
Function Name Type Evidence Reference(s)
product MarR protein nd nd
reactant marRAB_mRNA RNA nd nd



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