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MatA Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          


Gensor Unit       
Name: MatA
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): biological_process GO:0015811 - L-cystine transport
GO:0006865 - amino acid transport
GO:1903712 - cysteine transmembrane transport
GO:0015830 - diaminopimelate transport
GO:0035235 - ionotropic glutamate receptor signaling pathway
GO:1902021 - regulation of bacterial-type flagellum-dependent cell motility
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cellular_component GO:0005829 - cytosol
GO:0016020 - membrane
GO:0030288 - outer membrane-bounded periplasmic space
GO:0042597 - periplasmic space
molecular_function GO:0015184 - L-cystine transmembrane transporter activity
GO:0016597 - amino acid binding
GO:0001047 - core promoter binding
GO:0033229 - cysteine transmembrane transporter activity
GO:0004970 - ionotropic glutamate receptor activity
GO:0005515 - protein binding
GO:0016989 - sigma factor antagonist activity
Read more >
Components: Show/Hide Components Table (59 more...)
Function Name Type
protein EcpA protein
protein EcpR protein
protein FlgB protein
protein FlgC protein
protein FlgE protein
protein FlgF protein
protein FlgG protein
protein FlgH protein
protein FlgI protein
protein FlgK protein
protein FlgL protein
protein FlhA protein
protein FlhB protein
protein FlhC protein
protein FlhD protein
complex FlhD-FlhC complex
protein FliA protein
complex FliA-RpoB-RpoC-RpoA complex
protein FliC protein
protein FliD protein
protein FliE protein
protein FliF protein
protein FliG protein
protein FliH protein
protein FliI protein
protein FliJ protein
protein FliL protein
complex FliL-FliE-FliF-FlgI-FlgG-FlgF-FlgC-FlgB-MotB-MotA-FlgH-FliG-FliM-FliN-FliJ-FliI-FliH-FliR-FliQ-FliP-FliO-FlhB-FlhA-FlgE-FlgK-FlgL-FliC-FliD complex
protein FliM protein
protein FliN protein
protein FliO protein
protein FliP protein
protein FliQ protein
protein FliR protein
protein FliZ protein
protein MatA protein
protein MotA protein
protein MotB protein
protein RpoA protein
protein RpoB protein
protein RpoC protein
protein TcyJ protein
protein TcyL protein
protein TcyN protein
complex TcyN-TcyL-TcyJ complex
simple_molecule cysteine simple_molecule
simple_molecule cysteine_Ext simple_molecule
simple_molecule cystine simple_molecule
simple_molecule cystine_Ext simple_molecule
gene ecpA gene
RNA ecpA_mRNA RNA
gene ecpR gene
RNA ecpR_mRNA RNA
gene flhDC gene
RNA flhDC_mRNA RNA
gene fliAZ-tcyJ gene
RNA fliAZ-tcyJ_mRNA RNA
gene fliC gene
RNA fliC_mRNA RNA


Reactions       
Showing 19 reactions
MatA ecpA ecpA_mRNA
Name: ecpA -> ecpA_mRNA
Description: Transcription of transcription unit ecpA. Reaction activation by MatA.
Type: transcription
Pathway Components: ecpA - MatA -> ecpA_mRNA
Components:
Function Name Type Evidence Reference(s)
activator MatA protein nd nd
reactant ecpA gene nd nd
product ecpA_mRNA RNA nd nd
MatA ecpR ecpR_mRNA
Name: ecpR -> ecpR_mRNA
Description: Transcription of transcription unit ecpR. Reaction activation by MatA.
Type: transcription
Pathway Components: ecpR - MatA -> ecpR_mRNA
Components:
Function Name Type Evidence Reference(s)
activator MatA protein nd nd
reactant ecpR gene nd nd
product ecpR_mRNA RNA nd nd
MatA flhDC flhDC_mRNA
Name: flhDC -> flhDC_mRNA
Description: Transcription of transcription unit flhDC. Reaction inhibition by MatA.
Type: transcription
Pathway Components: flhDC - MatA -> flhDC_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor MatA protein nd nd
reactant flhDC gene nd nd
product flhDC_mRNA RNA nd nd
MatA fliAZ-tcyJ fliAZ-tcyJ_mRNA
Name: fliAZ-tcyJ -> fliAZ-tcyJ_mRNA
Description: Transcription of transcription unit fliAZ-tcyJ. Reaction inhibition by MatA.
Type: transcription
Pathway Components: fliAZ-tcyJ - MatA -> fliAZ-tcyJ_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor MatA protein nd nd
reactant fliAZ-tcyJ gene nd nd
product fliAZ-tcyJ_mRNA RNA nd nd
MatA fliC fliC_mRNA
Name: fliC -> fliC_mRNA
Description: Transcription of transcription unit fliC. Reaction inhibition by MatA.
Type: transcription
Pathway Components: fliC - MatA -> fliC_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor MatA protein nd nd
reactant fliC gene nd nd
product fliC_mRNA RNA nd nd
flhDC_mRNA FlhD
Name: flhDC_mRNA -> FlhD
Description: Translation of FlhD
Type: translation
Pathway Components: flhDC_mRNA -> FlhD
Components:
Function Name Type Evidence Reference(s)
product FlhD protein nd nd
reactant flhDC_mRNA RNA nd nd
FlhC + FlhD FlhD-FlhC
Name: FlhC + FlhD -> FlhD-FlhC
Description: Reaction transforming FlhC, FlhD into FlhD-FlhC
Type: state transition
Pathway Components: FlhC + FlhD -> FlhD-FlhC
Components:
Function Name Type Evidence Reference(s)
reactant FlhC protein nd nd
reactant FlhD protein nd nd
product FlhD-FlhC complex nd nd
flhDC_mRNA FlhC
Name: flhDC_mRNA -> FlhC
Description: Translation of FlhC
Type: translation
Pathway Components: flhDC_mRNA -> FlhC
Components:
Function Name Type Evidence Reference(s)
product FlhC protein nd nd
reactant flhDC_mRNA RNA nd nd
fliC_mRNA FliC
Name: fliC_mRNA -> FliC
Description: Translation of FliC
Type: translation
Pathway Components: fliC_mRNA -> FliC
Components:
Function Name Type Evidence Reference(s)
product FliC protein nd nd
reactant fliC_mRNA RNA nd nd
Protein Monomers Protein complex
Name: FliJ + FlgE + FliO + FliF + FlgK + MotA + FlgB + FliG + FlgL + FliC + FlgH + MotB + FliI + FliD + FlhB + FliM + FliN + FliR + FlgG + FliP + FlgI + FlgF + FlgC + FliL + FlhA + FliH + FliE + FliQ -> FliL-FliE-FliF-FlgI-FlgG-FlgF-FlgC-FlgB-MotB-MotA-FlgH-FliG-FliM-FliN-FliJ-FliI-FliH-FliR-FliQ-FliP-FliO-FlhB-FlhA-FlgE-FlgK-FlgL-FliC-FliD
Description: Reaction transforming FliJ, FlgE, FliO, FliF, FlgK, MotA, FlgB, FliG, FlgL, FliC, FlgH, MotB, FliI, FliD, FlhB, FliM, FliN, FliR, FlgG, FliP, FlgI, FlgF, FlgC, FliL, FlhA, FliH, FliE, FliQ into FliL-FliE-FliF-FlgI-FlgG-FlgF-FlgC-FlgB-MotB-MotA-FlgH-FliG-FliM-FliN-FliJ-FliI-FliH-FliR-FliQ-FliP-FliO-FlhB-FlhA-FlgE-FlgK-FlgL-FliC-FliD
Type: state transition
Pathway Components: FliJ + FlgE + FliO + FliF + FlgK + MotA + FlgB + FliG + FlgL + FliC + FlgH + MotB + FliI + FliD + FlhB + FliM + FliN + FliR + FlgG + FliP + FlgI + FlgF + FlgC + FliL + FlhA + FliH + FliE + FliQ -> FliL-FliE-FliF-FlgI-FlgG-FlgF-FlgC-FlgB-MotB-MotA-FlgH-FliG-FliM-FliN-FliJ-FliI-FliH-FliR-FliQ-FliP-FliO-FlhB-FlhA-FlgE-FlgK-FlgL-FliC-FliD
Components: Show/Hide Components Table
ecpR_mRNA EcpR
Name: ecpR_mRNA -> EcpR
Description: Translation of EcpR
Type: translation
Pathway Components: ecpR_mRNA -> EcpR
Components:
Function Name Type Evidence Reference(s)
product EcpR protein nd nd
reactant ecpR_mRNA RNA nd nd
fliAZ-tcyJ_mRNA FliA
Name: fliAZ-tcyJ_mRNA -> FliA
Description: Translation of FliA
Type: translation
Pathway Components: fliAZ-tcyJ_mRNA -> FliA
Components:
Function Name Type Evidence Reference(s)
product FliA protein nd nd
reactant fliAZ-tcyJ_mRNA RNA nd nd
RpoA + RpoC + RpoB + FliA FliA-RpoB-RpoC-RpoA
Name: RpoA + RpoC + RpoB + FliA -> FliA-RpoB-RpoC-RpoA
Description: Reaction transforming RpoA, RpoC, RpoB, FliA into FliA-RpoB-RpoC-RpoA
Type: state transition
Pathway Components: RpoA + RpoC + RpoB + FliA -> FliA-RpoB-RpoC-RpoA
Components:
Function Name Type Evidence Reference(s)
reactant FliA protein nd nd
product FliA-RpoB-RpoC-RpoA complex nd nd
reactant RpoA protein nd nd
reactant RpoB protein nd nd
reactant RpoC protein nd nd
fliAZ-tcyJ_mRNA FliZ
Name: fliAZ-tcyJ_mRNA -> FliZ
Description: Translation of FliZ
Type: translation
Pathway Components: fliAZ-tcyJ_mRNA -> FliZ
Components:
Function Name Type Evidence Reference(s)
product FliZ protein nd nd
reactant fliAZ-tcyJ_mRNA RNA nd nd
fliAZ-tcyJ_mRNA TcyJ
Name: fliAZ-tcyJ_mRNA -> TcyJ
Description: Translation of TcyJ
Type: translation
Pathway Components: fliAZ-tcyJ_mRNA -> TcyJ
Components:
Function Name Type Evidence Reference(s)
product TcyJ protein nd nd
reactant fliAZ-tcyJ_mRNA RNA nd nd
TcyL + TcyJ + TcyN TcyN-TcyL-TcyJ
Name: TcyL + TcyJ + TcyN -> TcyN-TcyL-TcyJ
Description: Reaction transforming TcyL, TcyJ, TcyN into TcyN-TcyL-TcyJ
Type: state transition
Pathway Components: TcyL + TcyJ + TcyN -> TcyN-TcyL-TcyJ
Components:
Function Name Type Evidence Reference(s)
reactant TcyJ protein nd nd
reactant TcyL protein nd nd
reactant TcyN protein nd nd
product TcyN-TcyL-TcyJ complex nd nd
TcyN-TcyL-TcyJ cysteine_Ext cysteine
Name: cysteine_Ext -> cysteine
Description: Transport of cysteine_Ext through a bacterial membrane, leading to the presence of cysteine inside the cell.
Type: transport
Pathway Components: cysteine_Ext - TcyN-TcyL-TcyJ -> cysteine
Components:
Function Name Type Evidence Reference(s)
catalyzer TcyN-TcyL-TcyJ complex nd nd
product cysteine simple_molecule nd nd
reactant cysteine_Ext simple_molecule nd nd
TcyN-TcyL-TcyJ cysteine cystine_Ext cystine
Name: cystine_Ext -> cystine
Description: Transport of cystine_Ext through a bacterial membrane, leading to the presence of cystine inside the cell.
Type: transport
Pathway Components: cystine_Ext - TcyN-TcyL-TcyJ - cysteine -> cystine
Components:
Function Name Type Evidence Reference(s)
catalyzer TcyN-TcyL-TcyJ complex nd nd
inhibitor cysteine simple_molecule nd nd
product cystine simple_molecule nd nd
reactant cystine_Ext simple_molecule nd nd
ecpA_mRNA EcpA
Name: ecpA_mRNA -> EcpA
Description: Translation of EcpA
Type: translation
Pathway Components: ecpA_mRNA -> EcpA
Components:
Function Name Type Evidence Reference(s)
product EcpA protein nd nd
reactant ecpA_mRNA RNA nd nd



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