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LysR Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
CO2 L-lysine LysA LysR lysA lysA_mRNA lysR lysR_mRNA M-DAP


Gensor Unit       
Name: LysR
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): biological_process GO:0009089 - lysine biosynthetic process via diaminopimelate
GO:0010628 - positive regulation of gene expression
molecular_function GO:0008836 - diaminopimelate decarboxylase activity
GO:0005515 - protein binding
GO:0030170 - pyridoxal phosphate binding
GO:0043565 - sequence-specific DNA binding
Components: Show/Hide Components Table (9 more...)
Function Name Type
simple_molecule CO2 simple_molecule
protein LysA protein
protein LysR protein
simple_molecule M-DAP simple_molecule
gene lysA gene
RNA lysA_mRNA RNA
gene lysR gene
RNA lysR_mRNA RNA
simple_molecule lysine simple_molecule


Reactions       
Showing 5 reactions
LysR lysA lysA_mRNA
Name: lysA -> lysA_mRNA
Description: Transcription of transcription unit lysA. Reaction activation by LysR.
Type: transcription
Pathway Components: lysA - LysR -> lysA_mRNA
Components:
Function Name Type Evidence Reference(s)
activator LysR protein nd nd
reactant lysA gene nd nd
product lysA_mRNA RNA nd nd
LysR lysR lysR_mRNA
Name: lysR -> lysR_mRNA
Description: Transcription of transcription unit lysR. Reaction inhibition by LysR.
Type: transcription
Pathway Components: lysR - LysR -> lysR_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor LysR protein nd nd
reactant lysR gene nd nd
product lysR_mRNA RNA nd nd
lysA_mRNA LysA
Name: lysA_mRNA -> LysA
Description: Translation of LysA
Type: translation
Pathway Components: lysA_mRNA -> LysA
Components:
Function Name Type Evidence Reference(s)
product LysA protein nd nd
reactant lysA_mRNA RNA nd nd
LysA lysine M-DAP lysine + CO2
Name: M-DAP -> lysine + CO2
Description: Reaction transforming M-DAP into lysine, CO2
Type: state transition
Pathway Components: M-DAP - LysA - lysine -> lysine + CO2
Components:
Function Name Type Evidence Reference(s)
product CO2 simple_molecule nd nd
catalyzer LysA protein nd nd
reactant M-DAP simple_molecule nd nd
inhibitor lysine simple_molecule nd nd
product lysine simple_molecule nd nd
lysR_mRNA LysR
Name: lysR_mRNA -> LysR
Description: Translation of LysR
Type: translation
Pathway Components: lysR_mRNA -> LysR
Components:
Function Name Type Evidence Reference(s)
product LysR protein nd nd
reactant lysR_mRNA RNA nd nd



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