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LrhA Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
FimE FlhC FlhD LrhA fimE fimE_mRNA flhDC flhDC_mRNA lrhA lrhA_mRNA


Gensor Unit       
Name: LrhA
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): biological_process GO:0015074 - DNA integration
GO:0006310 - DNA recombination
GO:0045892 - negative regulation of transcription, DNA-templated
GO:0045893 - positive regulation of transcription, DNA-templated
GO:0006355 - regulation of transcription, DNA-templated
GO:0006351 - transcription, DNA-templated
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molecular_function GO:0003700 - DNA binding transcription factor activity
GO:0000986 - bacterial-type proximal promoter sequence-specific DNA binding
GO:0043565 - sequence-specific DNA binding
Components: Show/Hide Components Table (11 more...)
Function Name Type
protein FimE protein
protein FlhC protein
protein FlhD protein
complex FlhD-FlhC complex
protein LrhA protein
gene fimE gene
RNA fimE_mRNA RNA
gene flhDC gene
RNA flhDC_mRNA RNA
gene lrhA gene
RNA lrhA_mRNA RNA


Reactions       
Showing 8 reactions
LrhA fimE fimE_mRNA
Name: fimE -> fimE_mRNA
Description: Transcription of transcription unit fimE. Reaction activation by LrhA.
Type: transcription
Pathway Components: fimE - LrhA -> fimE_mRNA
Components:
Function Name Type Evidence Reference(s)
activator LrhA protein nd nd
reactant fimE gene nd nd
product fimE_mRNA RNA nd nd
LrhA flhDC flhDC_mRNA
Name: flhDC -> flhDC_mRNA
Description: Transcription of transcription unit flhDC. Reaction inhibition by LrhA.
Type: transcription
Pathway Components: flhDC - LrhA -> flhDC_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor LrhA protein nd nd
reactant flhDC gene nd nd
product flhDC_mRNA RNA nd nd
LrhA lrhA lrhA_mRNA
Name: lrhA -> lrhA_mRNA
Description: Transcription of transcription unit lrhA. Reaction activation by LrhA.
Type: transcription
Pathway Components: lrhA - LrhA -> lrhA_mRNA
Components:
Function Name Type Evidence Reference(s)
activator LrhA protein nd nd
reactant lrhA gene nd nd
product lrhA_mRNA RNA nd nd
fimE_mRNA FimE
Name: fimE_mRNA -> FimE
Description: Translation of FimE
Type: translation
Pathway Components: fimE_mRNA -> FimE
Components:
Function Name Type Evidence Reference(s)
product FimE protein nd nd
reactant fimE_mRNA RNA nd nd
flhDC_mRNA FlhD
Name: flhDC_mRNA -> FlhD
Description: Translation of FlhD
Type: translation
Pathway Components: flhDC_mRNA -> FlhD
Components:
Function Name Type Evidence Reference(s)
product FlhD protein nd nd
reactant flhDC_mRNA RNA nd nd
FlhC + FlhD FlhD-FlhC
Name: FlhC + FlhD -> FlhD-FlhC
Description: Reaction transforming FlhC, FlhD into FlhD-FlhC
Type: state transition
Pathway Components: FlhC + FlhD -> FlhD-FlhC
Components:
Function Name Type Evidence Reference(s)
reactant FlhC protein nd nd
reactant FlhD protein nd nd
product FlhD-FlhC complex nd nd
flhDC_mRNA FlhC
Name: flhDC_mRNA -> FlhC
Description: Translation of FlhC
Type: translation
Pathway Components: flhDC_mRNA -> FlhC
Components:
Function Name Type Evidence Reference(s)
product FlhC protein nd nd
reactant flhDC_mRNA RNA nd nd
lrhA_mRNA LrhA
Name: lrhA_mRNA -> LrhA
Description: Translation of LrhA
Type: translation
Pathway Components: lrhA_mRNA -> LrhA
Components:
Function Name Type Evidence Reference(s)
product LrhA protein nd nd
reactant lrhA_mRNA RNA nd nd



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