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LexA Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
Cho D-ala D-alanyl-D-alanine D-glu DNA combined with exogenous DNA to form a recombinational junction DNA with lesion DNA without lesion DNA(N) DdlB DinB DinD DinF DinG DinI DinJ DinQ DnaG FtsA FtsI FtsK FtsL FtsQ FtsW FtsZ HokE InsK L-alanine LexA LpxC MraY MurC MurD MurE MurF MurG N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine_Ext Phr PolB This Gensor Unit is not yet available RecA RecN RecX RpoD RpsU RuvA RuvB RuvC SbmC Ssb SulA SymE TisB UDP UDP-3-O-(3-hydroxytetradecanoyl)glucosamine UDP-3-O-(3-hydroxymyristoyl)-N-acetylglucosamine UDP-GlcNAc UDP-N-acetylmuramoyl-L-alanyl-D-glutamate UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine UDP-N-acetylmuramyl-L-Ala UDP-N-alpha-D-acetylmuramate UMP UmuC UmuD UvrA UvrB UvrC UvrD UvrY YafN YafO YafP YafQ YbfE YdjM YebG a DNA cyclobutadipyrimidine a deoxynucleoside triphosphate nucleoside 5'-monophosphate a peptidoglycan dimer (meso-diaminopimelate containing) a peptidoglycan with D,D cross-links (meso-diaminopimelate containing) a short RNA Segment a single stranded DNA ssRNA acetate mRNA cho cho_mRNA UPP (ambiguous) ditrans,polycis-undecaprenyl phosphate dinB-yafNOP dinB-yafNOP_mRNA dinD dinD_mRNA dinG dinG_mRNA dinI dinI_mRNA dinJ-yafQ dinJ-yafQ_mRNA dinQ dinQ_mRNA PP ftsK ftsK_mRNA ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA hokE hokE_mRNA insK insK_mRNA lexA-dinF lexA-dinF_mRNA M-DAP molR_1 molR_1_mRNA peptidoglycan D-alanyl-DAP crosslink peptidoglycan tetrapeptide, glycan chain 1 peptidoglycan tetrapeptide, glycan chain 2 phosphate phr phr_mRNA polB polB_mRNA recA recAX recAX_mRNA recA_mRNA recN recN_mRNA resolution of recombinational junction formation of two intact strands rpsU-dnaG-rpoD rpsU-dnaG-rpoD_mRNA ruvAB ruvAB_mRNA sbmC sbmC_mRNA ssb ssb_mRNA sulA sulA_mRNA symE symE_mRNA tisB tisB_mRNA umuDC umuDC_mRNA uvrA uvrA_mRNA uvrB uvrB_mRNA This Gensor Unit is not yet available This Gensor Unit is not yet available uvrD uvrD_mRNA uvrYC uvrYC_mRNA yafNOP yafNOP_mRNA ybfE ybfE_mRNA ydjM ydjM_mRNA yebG yebG_mRNA |DNA-Adjacent-Pyrimidines| UmuC UmuD UvrD UvrA UvrC UvrB RuvC RuvB RuvA phosphate phosphate phosphate phosphate MolR_1


Gensor Unit       
Name: LexA
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): GO:0030529 - intracellular ribonucleoprotein complex
GO:0045892 - negative regulation of transcription, DNA-templated
GO:0051991 - UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity
GO:0019899 - enzyme binding
GO:0022611 - dormancy process
GO:0022627 - cytosolic small ribosomal subunit
GO:0008236 - serine-type peptidase activity
GO:0008270 - zinc ion binding
GO:0003700 - transcription factor activity, sequence-specific DNA binding
GO:0005253 - anion channel activity
GO:0003824 - catalytic activity
Read more >
Components:
Function Name Type
simple molecule |DNA-Adjacent-Pyrimidines| simple molecule


Reactions       
Showing 113 reactions
cho cho_mRNA
Name: cho -> cho_mRNA
Description: Transcription of transcription unit cho; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product cho_mRNA RNA nd nd
reactant cho gene nd nd
dinB-yafNOP dinB-yafNOP_mRNA
Name: dinB-yafNOP -> dinB-yafNOP_mRNA
Description: Transcription of transcription unit dinB-yafNOP; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product dinB-yafNOP_mRNA RNA nd nd
reactant dinB-yafNOP gene nd nd
dinD dinD_mRNA
Name: dinD -> dinD_mRNA
Description: Transcription of transcription unit dinD; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product dinD_mRNA RNA nd nd
reactant dinD gene nd nd
dinG dinG_mRNA
Name: dinG -> dinG_mRNA
Description: Transcription of transcription unit dinG; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant dinG gene nd nd
product dinG_mRNA RNA nd nd
dinI dinI_mRNA
Name: dinI -> dinI_mRNA
Description: Transcription of transcription unit dinI; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product dinI_mRNA RNA nd nd
reactant dinI gene nd nd
dinJ-yafQ dinJ-yafQ_mRNA
Name: dinJ-yafQ -> dinJ-yafQ_mRNA
Description: Transcription of transcription unit dinJ-yafQ; reaction inhibition by DinJ-YafQ.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant dinJ-yafQ gene nd nd
product dinJ-yafQ_mRNA RNA nd nd
dinQ dinQ_mRNA
Name: dinQ -> dinQ_mRNA
Description: Transcription of transcription unit dinQ; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product dinQ_mRNA RNA nd nd
reactant dinQ gene nd nd
ftsK ftsK_mRNA
Name: ftsK -> ftsK_mRNA
Description: Transcription of transcription unit ftsK; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant ftsK gene nd nd
product ftsK_mRNA RNA nd nd
ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA
Name: ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC -> ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA
Description: Transcription of transcription unit ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA RNA nd nd
reactant ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC gene nd nd
hokE hokE_mRNA
Name: hokE -> hokE_mRNA
Description: Transcription of transcription unit hokE; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product hokE_mRNA RNA nd nd
reactant hokE gene nd nd
insK insK_mRNA
Name: insK -> insK_mRNA
Description: Transcription of transcription unit insK; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product insK_mRNA RNA nd nd
reactant insK gene nd nd
lexA-dinF lexA-dinF_mRNA
Name: lexA-dinF -> lexA-dinF_mRNA
Description: Transcription of transcription unit lexA-dinF; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant lexA-dinF gene nd nd
product lexA-dinF_mRNA RNA nd nd
molR_1 molR_1_mRNA
Name: molR_1 -> molR_1_mRNA
Description: Transcription of transcription unit molR_1; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant molR_1 gene nd nd
product molR_1_mRNA RNA nd nd
phr phr_mRNA
Name: phr -> phr_mRNA
Description: Transcription of transcription unit phr; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant phr gene nd nd
product phr_mRNA RNA nd nd
polB polB_mRNA
Name: polB -> polB_mRNA
Description: Transcription of transcription unit polB; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant polB gene nd nd
product polB_mRNA RNA nd nd
recA recA_mRNA
Name: recA -> recA_mRNA
Description: Transcription of transcription unit recA; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant recA gene nd nd
product recA_mRNA RNA nd nd
recAX recAX_mRNA
Name: recAX -> recAX_mRNA
Description: Transcription of transcription unit recAX; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product recAX_mRNA RNA nd nd
reactant recAX gene nd nd
recN recN_mRNA
Name: recN -> recN_mRNA
Description: Transcription of transcription unit recN; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant recN gene nd nd
product recN_mRNA RNA nd nd
rpsU-dnaG-rpoD rpsU-dnaG-rpoD_mRNA
Name: rpsU-dnaG-rpoD -> rpsU-dnaG-rpoD_mRNA
Description: Transcription of transcription unit rpsU-dnaG-rpoD; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product rpsU-dnaG-rpoD_mRNA RNA nd nd
reactant rpsU-dnaG-rpoD gene nd nd
ruvAB ruvAB_mRNA
Name: ruvAB -> ruvAB_mRNA
Description: Transcription of transcription unit ruvAB; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant ruvAB gene nd nd
product ruvAB_mRNA RNA nd nd
sbmC sbmC_mRNA
Name: sbmC -> sbmC_mRNA
Description: Transcription of transcription unit sbmC; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant sbmC gene nd nd
product sbmC_mRNA RNA nd nd
ssb ssb_mRNA
Name: ssb -> ssb_mRNA
Description: Transcription of transcription unit ssb; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant ssb gene nd nd
product ssb_mRNA RNA nd nd
sulA sulA_mRNA
Name: sulA -> sulA_mRNA
Description: Transcription of transcription unit sulA; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant sulA gene nd nd
product sulA_mRNA RNA nd nd
symE symE_mRNA
Name: symE -> symE_mRNA
Description: Transcription of transcription unit symE; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant symE gene nd nd
product symE_mRNA RNA nd nd
tisB tisB_mRNA
Name: tisB -> tisB_mRNA
Description: Transcription of transcription unit tisB; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product tisB_mRNA RNA nd nd
reactant tisB gene nd nd
umuDC umuDC_mRNA
Name: umuDC -> umuDC_mRNA
Description: Transcription of transcription unit umuDC; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product umuDC_mRNA RNA nd nd
reactant umuDC gene nd nd
uvrA uvrA_mRNA
Name: uvrA -> uvrA_mRNA
Description: Transcription of transcription unit uvrA; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product uvrA_mRNA RNA nd nd
reactant uvrA gene nd nd
uvrB uvrB_mRNA
Name: uvrB -> uvrB_mRNA
Description: Transcription of transcription unit uvrB; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product uvrB_mRNA RNA nd nd
reactant uvrB gene nd nd
uvrC uvrC_mRNA
Name: uvrC -> uvrC_mRNA
Description: Transcription of transcription unit uvrC; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product uvrC_mRNA RNA nd nd
reactant uvrC gene nd nd
uvrD uvrD_mRNA
Name: uvrD -> uvrD_mRNA
Description: Transcription of transcription unit uvrD; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product uvrD_mRNA RNA nd nd
reactant uvrD gene nd nd
uvrYC uvrYC_mRNA
Name: uvrYC -> uvrYC_mRNA
Description: Transcription of transcription unit uvrYC; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product uvrYC_mRNA RNA nd nd
reactant uvrYC gene nd nd
yafNOP yafNOP_mRNA
Name: yafNOP -> yafNOP_mRNA
Description: Transcription of transcription unit yafNOP; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product yafNOP_mRNA RNA nd nd
reactant yafNOP gene nd nd
ybfE ybfE_mRNA
Name: ybfE -> ybfE_mRNA
Description: Transcription of transcription unit ybfE; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product ybfE_mRNA RNA nd nd
reactant ybfE gene nd nd
ydjM ydjM_mRNA
Name: ydjM -> ydjM_mRNA
Description: Transcription of transcription unit ydjM; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant ydjM gene nd nd
product ydjM_mRNA RNA nd nd
yebG yebG_mRNA
Name: yebG -> yebG_mRNA
Description: Transcription of transcription unit yebG; reaction inhibition by LexA.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant yebG gene nd nd
product yebG_mRNA RNA nd nd
yafNOP_mRNA YafO
Name: yafNOP_mRNA -> YafO
Description: Translation of YafO
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant yafNOP_mRNA RNA nd nd
product YafO protein nd nd
mRNA ssRNA + ssRNA
Name: mRNA -> ssRNA + ssRNA
Description: Reaction transforming mRNA into ssRNA, ssRNA
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant mRNA simple molecule nd nd
product ssRNA simple molecule nd nd
ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA FtsW
Name: ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA -> FtsW
Description: Translation of FtsW
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA RNA nd nd
product FtsW protein nd nd
N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine_Ext N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine
Name: N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine_Ext -> N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine
Description: Transport of N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine_Ext through a bacterial membrane, leading to the presence of N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine_Ext simple molecule nd nd
product N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine simple molecule nd nd
rpsU-dnaG-rpoD_mRNA RpsU
Name: rpsU-dnaG-rpoD_mRNA -> RpsU
Description: Translation of RpsU
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant rpsU-dnaG-rpoD_mRNA RNA nd nd
product RpsU protein nd nd
symE_mRNA SymE
Name: symE_mRNA -> SymE
Description: Translation of SymE
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant symE_mRNA RNA nd nd
product SymE protein nd nd
dinI_mRNA DinI
Name: dinI_mRNA -> DinI
Description: Translation of DinI
Type: translation
Components:
Function Name Type Evidence Reference(s)
product DinI protein nd nd
reactant dinI_mRNA RNA nd nd
ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA FtsA
Name: ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA -> FtsA
Description: Translation of FtsA
Type: translation
Components:
Function Name Type Evidence Reference(s)
product FtsA protein nd nd
reactant ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA RNA nd nd
umuDC_mRNA UmuC
Name: umuDC_mRNA -> UmuC
Description: Translation of UmuC
Type: translation
Components:
Function Name Type Evidence Reference(s)
product UmuC protein nd nd
reactant umuDC_mRNA RNA nd nd
UmuC + UmuD UmuC-UmuD
Name: UmuC + UmuD -> UmuC-UmuD
Description: Reaction transforming UmuC, UmuD into UmuC-UmuD
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product UmuC-UmuD complex nd nd
reactant UmuC protein nd nd
reactant UmuD protein nd nd
deoxyribonucleoside triphosphate + DNA(N) PP + DNA(N)
Name: deoxyribonucleoside triphosphate + DNA(N) -> PP + DNA(N)
Description: Reaction transforming deoxyribonucleoside triphosphate, DNA(N) into PP, DNA(N)
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product PP simple molecule nd nd
product DNA(N) simple molecule nd nd
reactant DNA(N) simple molecule nd nd
reactant deoxyribonucleoside triphosphate simple molecule nd nd
ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA MurC
Name: ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA -> MurC
Description: Translation of MurC
Type: translation
Components:
Function Name Type Evidence Reference(s)
product MurC protein nd nd
reactant ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA RNA nd nd
ala + UDP-N-alpha-D-acetylmuramate UDP-N-acetylmuramyl-L-Ala + phosphate
Name: ala + UDP-N-alpha-D-acetylmuramate -> UDP-N-acetylmuramyl-L-Ala + phosphate
Description: Reaction transforming ala, UDP-N-alpha-D-acetylmuramate into UDP-N-acetylmuramyl-L-Ala, phosphate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product phosphate simple molecule nd nd
reactant ala simple molecule nd nd
product UDP-N-acetylmuramyl-L-Ala simple molecule nd nd
reactant UDP-N-alpha-D-acetylmuramate simple molecule nd nd
recAX_mRNA RecX
Name: recAX_mRNA -> RecX
Description: Translation of RecX
Type: translation
Components:
Function Name Type Evidence Reference(s)
product RecX protein nd nd
reactant recAX_mRNA RNA nd nd
ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA MraY
Name: ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA -> MraY
Description: Translation of MraY
Type: translation
Components:
Function Name Type Evidence Reference(s)
product MraY protein nd nd
reactant ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA RNA nd nd
UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine + ditrans,polycis-undecaprenyl phosphate N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol + UMP
Name: UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine + ditrans,polycis-undecaprenyl phosphate -> N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol + UMP
Description: Reaction transforming UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine, ditrans,polycis-undecaprenyl phosphate into N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol, UMP
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant ditrans,polycis-undecaprenyl phosphate simple molecule nd nd
reactant UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine simple molecule nd nd
product N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol simple molecule nd nd
product UMP simple molecule nd nd
ybfE_mRNA YbfE
Name: ybfE_mRNA -> YbfE
Description: Translation of YbfE
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant ybfE_mRNA RNA nd nd
product YbfE protein nd nd
dinG_mRNA DinG
Name: dinG_mRNA -> DinG
Description: Translation of DinG
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant dinG_mRNA RNA nd nd
product DinG protein nd nd
ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA LpxC
Name: ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA -> LpxC
Description: Translation of LpxC
Type: translation
Components:
Function Name Type Evidence Reference(s)
product LpxC protein nd nd
reactant ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA RNA nd nd
UDP-3-O-(3-hydroxymyristoyl)-N-acetylglucosamine UDP-3-O-(3-hydroxytetradecanoyl)glucosamine + acetate
Name: UDP-3-O-(3-hydroxymyristoyl)-N-acetylglucosamine -> UDP-3-O-(3-hydroxytetradecanoyl)glucosamine + acetate
Description: Reaction transforming UDP-3-O-(3-hydroxymyristoyl)-N-acetylglucosamine into UDP-3-O-(3-hydroxytetradecanoyl)glucosamine, acetate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product acetate simple molecule nd nd
product UDP-3-O-(3-hydroxytetradecanoyl)glucosamine simple molecule nd nd
reactant UDP-3-O-(3-hydroxymyristoyl)-N-acetylglucosamine simple molecule nd nd
dinJ-yafQ_mRNA YafQ
Name: dinJ-yafQ_mRNA -> YafQ
Description: Translation of YafQ
Type: translation
Components:
Function Name Type Evidence Reference(s)
product YafQ protein nd nd
reactant dinJ-yafQ_mRNA RNA nd nd
ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA MurG
Name: ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA -> MurG
Description: Translation of MurG
Type: translation
Components:
Function Name Type Evidence Reference(s)
product MurG protein nd nd
reactant ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA RNA nd nd
N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol + UDP-GlcNAc N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine + UDP
Name: N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol + UDP-GlcNAc -> N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine + UDP
Description: Reaction transforming N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol, UDP-GlcNAc into N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine, UDP
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol simple molecule nd nd
product UDP simple molecule nd nd
product N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine simple molecule nd nd
reactant UDP-GlcNAc simple molecule nd nd
ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA MurE
Name: ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA -> MurE
Description: Translation of MurE
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA RNA nd nd
product MurE protein nd nd
M-DAP + UDP-N-acetylmuramoyl-L-alanyl-D-glutamate UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate + phosphate
Name: M-DAP + UDP-N-acetylmuramoyl-L-alanyl-D-glutamate -> UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate + phosphate
Description: Reaction transforming M-DAP, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate into UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate, phosphate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate simple molecule nd nd
reactant UDP-N-acetylmuramoyl-L-alanyl-D-glutamate simple molecule nd nd
reactant M-DAP simple molecule nd nd
product phosphate simple molecule nd nd
tisB_mRNA TisB
Name: tisB_mRNA -> TisB
Description: Translation of TisB
Type: translation
Components:
Function Name Type Evidence Reference(s)
product TisB protein nd nd
reactant tisB_mRNA RNA nd nd
dinJ-yafQ_mRNA DinJ
Name: dinJ-yafQ_mRNA -> DinJ
Description: Translation of DinJ
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant dinJ-yafQ_mRNA RNA nd nd
product DinJ protein nd nd
polB_mRNA PolB
Name: polB_mRNA -> PolB
Description: Translation of PolB
Type: translation
Components:
Function Name Type Evidence Reference(s)
product PolB protein nd nd
reactant polB_mRNA RNA nd nd
DNA(N) nucleoside 5′-monophosphate
Name: DNA(N) -> nucleoside 5′-monophosphate
Description: Reaction transforming DNA(N) into nucleoside 5′-monophosphate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant DNA(N) simple molecule nd nd
product nucleoside 5′-monophosphate simple molecule nd nd
sbmC_mRNA SbmC
Name: sbmC_mRNA -> SbmC
Description: Translation of SbmC
Type: translation
Components:
Function Name Type Evidence Reference(s)
product SbmC protein nd nd
reactant sbmC_mRNA RNA nd nd
uvrA_mRNA UvrA
Name: uvrA_mRNA -> UvrA
Description: Translation of UvrA
Type: translation
Components:
Function Name Type Evidence Reference(s)
product UvrA protein nd nd
reactant uvrA_mRNA RNA nd nd
UvrD + UvrA + UvrC + UvrB UvrD-UvrA-UvrC-UvrB
Name: UvrD + UvrA + UvrC + UvrB -> UvrD-UvrA-UvrC-UvrB
Description: Reaction transforming UvrD, UvrA, UvrC, UvrB into UvrD-UvrA-UvrC-UvrB
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant UvrB protein nd nd
reactant UvrA protein nd nd
reactant UvrC protein nd nd
product UvrD-UvrA-UvrC-UvrB complex nd nd
reactant UvrD protein nd nd
DNA with lesion DNA without lesion
Name: DNA with lesion -> DNA without lesion
Description: Reaction transforming DNA with lesion into DNA without lesion
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product DNA without lesion simple molecule nd nd
reactant DNA with lesion simple molecule nd nd
ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA MurD
Name: ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA -> MurD
Description: Translation of MurD
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA RNA nd nd
product MurD protein nd nd
D-glu + UDP-N-acetylmuramyl-L-Ala UDP-N-acetylmuramoyl-L-alanyl-D-glutamate + phosphate
Name: D-glu + UDP-N-acetylmuramyl-L-Ala -> UDP-N-acetylmuramoyl-L-alanyl-D-glutamate + phosphate
Description: Reaction transforming D-glu, UDP-N-acetylmuramyl-L-Ala into UDP-N-acetylmuramoyl-L-alanyl-D-glutamate, phosphate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant D-glu simple molecule nd nd
reactant UDP-N-acetylmuramyl-L-Ala simple molecule nd nd
product phosphate simple molecule nd nd
product UDP-N-acetylmuramoyl-L-alanyl-D-glutamate simple molecule nd nd
lexA-dinF_mRNA LexA
Name: lexA-dinF_mRNA -> LexA
Description: Translation of LexA
Type: translation
Components:
Function Name Type Evidence Reference(s)
product LexA protein nd nd
reactant lexA-dinF_mRNA RNA nd nd
uvrD_mRNA UvrD
Name: uvrD_mRNA -> UvrD
Description: Translation of UvrD
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant uvrD_mRNA RNA nd nd
product UvrD protein nd nd
ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA MurF
Name: ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA -> MurF
Description: Translation of MurF
Type: translation
Components:
Function Name Type Evidence Reference(s)
product MurF protein nd nd
reactant ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC_mRNA RNA nd nd
D-alanyl-D-alanine + UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine + phosphate
Name: D-alanyl-D-alanine + UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate -> UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine + phosphate
Description: Reaction transforming D-alanyl-D-alanine, UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate into UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine, phosphate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine simple molecule nd nd
reactant UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate simple molecule nd nd
product phosphate simple molecule nd nd
reactant D-alanyl-D-alanine simple molecule nd nd
umuDC_mRNA UmuD
Name: umuDC_mRNA -> UmuD
Description: Translation of UmuD
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant umuDC_mRNA RNA nd nd
product UmuD protein nd nd
rpsU-dnaG-rpoD_mRNA RpoD
Name: rpsU-dnaG-rpoD_mRNA -> RpoD
Description: Translation of RpoD
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant rpsU-dnaG-rpoD_mRNA RNA nd nd
product RpoD protein nd nd