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KdgR Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
2-dehydro-3-deoxy-D-gluconate-6-phosphate 6-p gluconate CO2 D-glyceraldehyde 3-phosphate Eda Edd KdgR L-4-hydroxy-2-keto-glutarate eda eda_mRNA edd-eda edd-eda_mRNA glyoxylate oxalacetate pyruvate


Gensor Unit       
Name: KdgR
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): GO:0016020 - membrane
GO:0003824 - catalytic activity
GO:0008675 - 2-dehydro-3-deoxy-phosphogluconate aldolase activity
GO:0016829 - lyase activity
GO:0005737 - cytoplasm
GO:0009255 - Entner-Doudoroff pathway through 6-phosphogluconate
GO:0005829 - cytosol
GO:0004456 - phosphogluconate dehydratase activity
GO:0042802 - identical protein binding
GO:0008700 - 4-hydroxy-2-oxoglutarate aldolase activity
GO:0008152 - metabolic process
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Components:
Function Name Type
simple molecule pyruvate simple molecule


Reactions       
Showing 8 reactions
eda eda_mRNA
Name: eda -> eda_mRNA
Description: Transcription of transcription unit eda; reaction inhibition by KdgR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant eda gene nd nd
product eda_mRNA RNA nd nd
edd-eda edd-eda_mRNA
Name: edd-eda -> edd-eda_mRNA
Description: Transcription of transcription unit edd-eda; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product edd-eda_mRNA RNA nd nd
reactant edd-eda gene nd nd
edd-eda_mRNA Eda
Name: edd-eda_mRNA -> Eda
Description: Translation of Eda
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant edd-eda_mRNA RNA nd nd
product Eda protein nd nd
oxalacetate pyruvate + CO2
Name: oxalacetate -> pyruvate + CO2
Description: Reaction transforming oxalacetate into pyruvate, CO2
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product pyruvate simple molecule nd nd
reactant oxalacetate simple molecule nd nd
product CO2 simple molecule nd nd
2-dehydro-3-deoxy-D-gluconate-6-phosphate D-glyceraldehyde 3-phosphate + pyruvate
Name: 2-dehydro-3-deoxy-D-gluconate-6-phosphate -> D-glyceraldehyde 3-phosphate + pyruvate
Description: Reaction transforming 2-dehydro-3-deoxy-D-gluconate-6-phosphate into D-glyceraldehyde 3-phosphate, pyruvate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant 2-dehydro-3-deoxy-D-gluconate-6-phosphate simple molecule nd nd
product pyruvate simple molecule nd nd
product D-glyceraldehyde 3-phosphate simple molecule nd nd
L-4-hydroxy-2-keto-glutarate glyoxylate + pyruvate
Name: L-4-hydroxy-2-keto-glutarate -> glyoxylate + pyruvate
Description: Reaction transforming L-4-hydroxy-2-keto-glutarate into glyoxylate, pyruvate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product pyruvate simple molecule nd nd
product glyoxylate simple molecule nd nd
reactant L-4-hydroxy-2-keto-glutarate simple molecule nd nd
edd-eda_mRNA Edd
Name: edd-eda_mRNA -> Edd
Description: Translation of Edd
Type: translation
Components:
Function Name Type Evidence Reference(s)
product Edd protein nd nd
reactant edd-eda_mRNA RNA nd nd
6-p gluconate 2-dehydro-3-deoxy-D-gluconate-6-phosphate
Name: 6-p gluconate -> 2-dehydro-3-deoxy-D-gluconate-6-phosphate
Description: Reaction transforming 6-p gluconate into 2-dehydro-3-deoxy-D-gluconate-6-phosphate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product 2-dehydro-3-deoxy-D-gluconate-6-phosphate simple molecule nd nd
reactant 6-p gluconate simple molecule nd nd



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