RegulonDB RegulonDB

IdnR Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
5-ketogluconate 5-ketogluconate_Ext D-gluconate 6-p gluconate D-gluconate_Ext GntK GntU IdnD IdnK IdnO IdnR IdnT L-idonate L-idonate_Ext This Gensor Unit is not yet available This Gensor Unit is not yet available This Gensor Unit is not yet available This Gensor Unit is not yet available idnDOTR idnDOTR_mRNA idnK idnK_mRNA IdnR 5-ketogluconate


Gensor Unit       
Name: IdnR
Classification:
Groups: GUs related to carbon source utilization
Gene Ontology Terms (GO): GO:0008270 - zinc ion binding
GO:0003700 - transcription factor activity, sequence-specific DNA binding
GO:0016491 - oxidoreductase activity
GO:0016020 - membrane
GO:0015725 - gluconate transport
GO:0015128 - gluconate transmembrane transporter activity
GO:0005887 - integral component of plasma membrane
GO:0005402 - cation:sugar symporter activity
GO:0016310 - phosphorylation
GO:0005737 - cytoplasm
GO:0019521 - D-gluconate metabolic process
Read more >
Components:
Function Name Type
simple molecule idonate simple molecule


Reactions       
Showing 18 reactions
5-ketogluconate + IdnR IdnR-5-ketogluconate
Name: 5-ketogluconate + IdnR -> IdnR-5-ketogluconate
Description: Reaction transforming 5-ketogluconate, IdnR into IdnR-5-ketogluconate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant IdnR protein nd nd
reactant 5-ketogluconate simple molecule nd nd
product IdnR-5-ketogluconate complex nd nd
idnDOTR idnDOTR_mRNA
Name: idnDOTR -> idnDOTR_mRNA
Description: Transcription of transcription unit idnDOTR; reaction inhibition by GntR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product idnDOTR_mRNA RNA nd nd
reactant idnDOTR operon nd nd
idnK idnK_mRNA
Name: idnK -> idnK_mRNA
Description: Transcription of transcription unit idnK; reaction inhibition by GntR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product idnK_mRNA RNA nd nd
reactant idnK operon nd nd
gntRKU gntRKU_mRNA
Name: gntRKU -> gntRKU_mRNA
Description: Transcription of transcription unit gntRKU; reaction inhibition by GntR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product gntRKU_mRNA RNA nd nd
reactant gntRKU operon nd nd
idonate + IdnR IdnR-idonate
Name: idonate + IdnR -> IdnR-idonate
Description: Reaction transforming idonate, IdnR into IdnR-idonate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant idonate simple molecule nd nd
product IdnR-idonate complex nd nd
reactant IdnR protein nd nd
gntK gntK_mRNA
Name: gntK -> gntK_mRNA
Description: Transcription of transcription unit gntK; reaction inhibition by GntR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant gntK operon nd nd
product gntK_mRNA RNA nd nd
gntKU gntKU_mRNA
Name: gntKU -> gntKU_mRNA
Description: Transcription of transcription unit gntKU; reaction inhibition by GntR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant gntKU operon nd nd
product gntKU_mRNA RNA nd nd
idnK_mRNA IdnK
Name: idnK_mRNA -> IdnK
Description: Translation of IdnK
Type: translation
Components:
Function Name Type Evidence Reference(s)
product idnK_mRNA RNA nd nd
reactant idnK_mRNA RNA nd nd
idnDOTR_mRNA IdnD
Name: idnDOTR_mRNA -> IdnD
Description: Translation of IdnD
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant idnDOTR_mRNA RNA nd nd
product idnDOTR_mRNA RNA nd nd
idnDOTR_mRNA IdnO
Name: idnDOTR_mRNA -> IdnO
Description: Translation of IdnO
Type: translation
Components:
Function Name Type Evidence Reference(s)
product idnDOTR_mRNA RNA nd nd
reactant idnDOTR_mRNA RNA nd nd
idnDOTR_mRNA IdnT
Name: idnDOTR_mRNA -> IdnT
Description: Translation of IdnT
Type: translation
Components:
Function Name Type Evidence Reference(s)
product idnDOTR_mRNA RNA nd nd
reactant idnDOTR_mRNA RNA nd nd
idnDOTR_mRNA IdnR
Name: idnDOTR_mRNA -> IdnR
Description: Translation of IdnR
Type: translation
Components:
Function Name Type Evidence Reference(s)
product idnDOTR_mRNA RNA nd nd
reactant idnDOTR_mRNA RNA nd nd
gntKU_mRNA GntK
Name: gntKU_mRNA -> GntK
Description: Translation of GntK
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant gntKU_mRNA RNA nd nd
product gntKU_mRNA RNA nd nd
gntKU_mRNA GntU
Name: gntKU_mRNA -> GntU
Description: Translation of GntU
Type: translation
Components:
Function Name Type Evidence Reference(s)
product gntKU_mRNA RNA nd nd
reactant gntKU_mRNA RNA nd nd
gntRKU_mRNA GntU
Name: gntRKU_mRNA -> GntU
Description: Translation of GntU
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant gntRKU_mRNA RNA nd nd
product gntRKU_mRNA RNA nd nd
gntRKU_mRNA GntK
Name: gntRKU_mRNA -> GntK
Description: Translation of GntK
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant gntRKU_mRNA RNA nd nd
product gntRKU_mRNA RNA nd nd
gntRKU_mRNA GntR
Name: gntRKU_mRNA -> GntR
Description: Translation of GntR
Type: translation
Components:
Function Name Type Evidence Reference(s)
product GntR protein nd nd
reactant gntRKU_mRNA RNA nd nd
gntK_mRNA GntK
Name: gntK_mRNA -> GntK
Description: Translation of GntK
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant gntK_mRNA RNA nd nd
product gntK_mRNA RNA nd nd



RegulonDB