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HdfR Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
ketoglutarate FlhC FlhD GltB GltD GltF HdfR L-glutamate L-glutamine ammonia flhDC flhDC_mRNA gltBDF gltBDF_mRNA GltB GltD


Gensor Unit       
Name: HdfR
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): biological_process GO:0019676 - ammonia assimilation cycle
GO:0006537 - glutamate biosynthetic process
GO:0006351 - transcription, DNA-templated
cellular_component GO:0005829 - cytosol
GO:0030288 - outer membrane-bounded periplasmic space
molecular_function GO:0004355 - glutamate synthase (NADPH) activity
GO:0015930 - glutamate synthase activity
GO:0016491 - oxidoreductase activity
GO:0005515 - protein binding
Components: Show/Hide Components Table (12 more...)
Function Name Type
protein FlhC protein
protein FlhD protein
complex FlhD-FlhC complex
protein GltB protein
protein GltD protein
complex GltD-GltB complex
protein GltF protein
protein HdfR protein
gene flhDC gene
RNA flhDC_mRNA RNA
gene gltBDF gene
RNA gltBDF_mRNA RNA


Reactions       
Showing 9 reactions
HdfR flhDC flhDC_mRNA
Name: flhDC -> flhDC_mRNA
Description: Transcription of transcription unit flhDC. Reaction inhibition by HdfR.
Type: transcription
Pathway Components: flhDC - HdfR -> flhDC_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor HdfR protein nd nd
reactant flhDC gene nd nd
product flhDC_mRNA RNA nd nd
HdfR gltBDF gltBDF_mRNA
Name: gltBDF -> gltBDF_mRNA
Description: Transcription of transcription unit gltBDF. Reaction activation by HdfR.
Type: transcription
Pathway Components: gltBDF - HdfR -> gltBDF_mRNA
Components:
Function Name Type Evidence Reference(s)
activator HdfR protein nd nd
reactant gltBDF gene nd nd
product gltBDF_mRNA RNA nd nd
flhDC_mRNA FlhD
Name: flhDC_mRNA -> FlhD
Description: Translation of FlhD
Type: translation
Pathway Components: flhDC_mRNA -> FlhD
Components:
Function Name Type Evidence Reference(s)
product FlhD protein nd nd
reactant flhDC_mRNA RNA nd nd
FlhC + FlhD FlhD-FlhC
Name: FlhC + FlhD -> FlhD-FlhC
Description: Reaction transforming FlhC, FlhD into FlhD-FlhC
Type: state transition
Pathway Components: FlhC + FlhD -> FlhD-FlhC
Components:
Function Name Type Evidence Reference(s)
reactant FlhC protein nd nd
reactant FlhD protein nd nd
product FlhD-FlhC complex nd nd
flhDC_mRNA FlhC
Name: flhDC_mRNA -> FlhC
Description: Translation of FlhC
Type: translation
Pathway Components: flhDC_mRNA -> FlhC
Components:
Function Name Type Evidence Reference(s)
product FlhC protein nd nd
reactant flhDC_mRNA RNA nd nd
gltBDF_mRNA GltB
Name: gltBDF_mRNA -> GltB
Description: Translation of GltB
Type: translation
Pathway Components: gltBDF_mRNA -> GltB
Components:
Function Name Type Evidence Reference(s)
product GltB protein nd nd
reactant gltBDF_mRNA RNA nd nd
GltB + GltD GltD-GltB
Name: GltB + GltD -> GltD-GltB
Description: Reaction transforming GltB, GltD into GltD-GltB
Type: state transition
Pathway Components: GltB + GltD -> GltD-GltB
Components:
Function Name Type Evidence Reference(s)
reactant GltB protein nd nd
reactant GltD protein nd nd
product GltD-GltB complex nd nd
gltBDF_mRNA GltD
Name: gltBDF_mRNA -> GltD
Description: Translation of GltD
Type: translation
Pathway Components: gltBDF_mRNA -> GltD
Components:
Function Name Type Evidence Reference(s)
product GltD protein nd nd
reactant gltBDF_mRNA RNA nd nd
gltBDF_mRNA GltF
Name: gltBDF_mRNA -> GltF
Description: Translation of GltF
Type: translation
Pathway Components: gltBDF_mRNA -> GltF
Components:
Function Name Type Evidence Reference(s)
product GltF protein nd nd
reactant gltBDF_mRNA RNA nd nd



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