RegulonDB RegulonDB

FliZ Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
GABA GABA_Ext CO2 CsgA CsgB CsgC CsgD CsgE CsgF CsgG FlhC FlhD FliZ GadB GadC GadE Gmr HdeA HdeB L-glutamate L-glutamate_Ext MdtE MdtF MlrA OsmY TolC YhiD a drug a drug_Ext csgBAC csgBAC_mRNA csgDEFG csgDEFG_mRNA CsgA CsgA_Ext cyclic di-3',5'-guanylate flhDC flhDC_mRNA gadBC gadBC_mRNA gadE-mdtEF gadE-mdtEF_mRNA gmr gmr_mRNA hdeAB-yhiD hdeAB-yhiD_mRNA 5'pGpG mlrA mlrA_mRNA osmY osmY_mRNA CsgG CsgE CsgF TolC MdtE MdtF


Gensor Unit       
Name: FliZ
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): GO:0071468 - cellular response to acidic pH
GO:0051082 - unfolded protein binding
GO:0008270 - zinc ion binding
GO:0003700 - transcription factor activity, sequence-specific DNA binding
GO:0003824 - catalytic activity
GO:0000986 - bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding
GO:0016020 - membrane
GO:1902208 - regulation of bacterial-type flagellum assembly
GO:0042597 - periplasmic space
GO:0044010 - single-species biofilm formation
GO:0019752 - carboxylic acid metabolic process
Read more >
Components:
Function Name Type
RNA osmY_mRNA RNA


Reactions       
Showing 36 reactions
csgBAC csgBAC_mRNA
Name: csgBAC -> csgBAC_mRNA
Description: Transcription of transcription unit csgBAC; reaction inhibition by CpxR-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product csgBAC_mRNA RNA nd nd
reactant csgBAC gene nd nd
csgDEFG csgDEFG_mRNA
Name: csgDEFG -> csgDEFG_mRNA
Description: Transcription of transcription unit csgDEFG; reaction activation by BasR-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product csgDEFG_mRNA RNA nd nd
reactant csgDEFG gene nd nd
flhDC flhDC_mRNA
Name: flhDC -> flhDC_mRNA
Description: Transcription of transcription unit flhDC; reaction inhibition by FliZ.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant flhDC gene nd nd
product flhDC_mRNA RNA nd nd
gadBC gadBC_mRNA
Name: gadBC -> gadBC_mRNA
Description: Transcription of transcription unit gadBC; reaction activation by AdiY.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant gadBC gene nd nd
product gadBC_mRNA RNA nd nd
gadE-mdtEF gadE-mdtEF_mRNA
Name: gadE-mdtEF -> gadE-mdtEF_mRNA
Description: Transcription of transcription unit gadE-mdtEF; reaction activation by EvgA-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant gadE-mdtEF gene nd nd
product gadE-mdtEF_mRNA RNA nd nd
gmr gmr_mRNA
Name: gmr -> gmr_mRNA
Description: Transcription of transcription unit gmr; reaction inhibition by FliZ.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant gmr gene nd nd
product gmr_mRNA RNA nd nd
hdeAB-yhiD hdeAB-yhiD_mRNA
Name: hdeAB-yhiD -> hdeAB-yhiD_mRNA
Description: Transcription of transcription unit hdeAB-yhiD; reaction inhibition by FliZ.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product hdeAB-yhiD_mRNA RNA nd nd
reactant hdeAB-yhiD gene nd nd
mlrA mlrA_mRNA
Name: mlrA -> mlrA_mRNA
Description: Transcription of transcription unit mlrA; reaction inhibition by FliZ.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant mlrA gene nd nd
product mlrA_mRNA RNA nd nd
osmY osmY_mRNA
Name: osmY -> osmY_mRNA
Description: Transcription of transcription unit osmY; reaction inhibition by FliZ.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product osmY_mRNA RNA nd nd
reactant osmY gene nd nd
csgDEFG_mRNA CsgF
Name: csgDEFG_mRNA -> CsgF
Description: Translation of CsgF
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant csgDEFG_mRNA RNA nd nd
product CsgF protein nd nd
CsgG + CsgE + CsgF CsgG-CsgE-CsgF
Name: CsgG + CsgE + CsgF -> CsgG-CsgE-CsgF
Description: Reaction transforming CsgG, CsgE, CsgF into CsgG-CsgE-CsgF
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product CsgG-CsgE-CsgF complex nd nd
reactant CsgF protein nd nd
reactant CsgG protein nd nd
reactant CsgE protein nd nd
CsgA_Ext CsgA
Name: CsgA_Ext -> CsgA
Description: Transport of CsgA_Ext through a bacterial membrane, leading to the presence of CsgA inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant CsgA_Ext simple molecule nd nd
product CsgA simple molecule nd nd
gadE-mdtEF_mRNA GadE
Name: gadE-mdtEF_mRNA -> GadE
Description: Translation of GadE
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant gadE-mdtEF_mRNA RNA nd nd
product GadE protein nd nd
flhDC_mRNA FlhD
Name: flhDC_mRNA -> FlhD
Description: Translation of FlhD
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant flhDC_mRNA RNA nd nd
product FlhD protein nd nd
gadBC_mRNA GadB
Name: gadBC_mRNA -> GadB
Description: Translation of GadB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant gadBC_mRNA RNA nd nd
product GadB protein nd nd
L-glutamate CO2 + GABA
Name: L-glutamate -> CO2 + GABA
Description: Reaction transforming L-glutamate into CO2, GABA
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product CO2 simple molecule nd nd
product GABA simple molecule nd nd
reactant L-glutamate simple molecule nd nd
csgBAC_mRNA CsgB
Name: csgBAC_mRNA -> CsgB
Description: Translation of CsgB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant csgBAC_mRNA RNA nd nd
product CsgB protein nd nd
csgDEFG_mRNA CsgE
Name: csgDEFG_mRNA -> CsgE
Description: Translation of CsgE
Type: translation
Components:
Function Name Type Evidence Reference(s)
product CsgE protein nd nd
reactant csgDEFG_mRNA RNA nd nd
hdeAB-yhiD_mRNA YhiD
Name: hdeAB-yhiD_mRNA -> YhiD
Description: Translation of YhiD
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant hdeAB-yhiD_mRNA RNA nd nd
product YhiD protein nd nd
gadBC_mRNA GadC
Name: gadBC_mRNA -> GadC
Description: Translation of GadC
Type: translation
Components:
Function Name Type Evidence Reference(s)
product GadC protein nd nd
reactant gadBC_mRNA RNA nd nd
GABA_Ext + L-glutamate_Ext L-glutamate + GABA
Name: GABA_Ext + L-glutamate_Ext -> L-glutamate + GABA
Description: Transport of GABA_Ext, L-glutamate_Ext through a bacterial membrane, leading to the presence of L-glutamate, GABA inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant GABA_Ext simple molecule nd nd
product GABA simple molecule nd nd
product L-glutamate simple molecule nd nd
reactant L-glutamate_Ext simple molecule nd nd
gadE-mdtEF_mRNA MdtE
Name: gadE-mdtEF_mRNA -> MdtE
Description: Translation of MdtE
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant gadE-mdtEF_mRNA RNA nd nd
product MdtE protein nd nd
TolC + MdtE + MdtF TolC-MdtE-MdtF
Name: TolC + MdtE + MdtF -> TolC-MdtE-MdtF
Description: Reaction transforming TolC, MdtE, MdtF into TolC-MdtE-MdtF
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product TolC-MdtE-MdtF complex nd nd
reactant MdtF protein nd nd
reactant TolC protein nd nd
reactant MdtE protein nd nd
a drug_Ext a drug
Name: a drug_Ext -> a drug
Description: Transport of a drug_Ext through a bacterial membrane, leading to the presence of a drug inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant a drug_Ext simple molecule nd nd
product a drug simple molecule nd nd
gmr_mRNA Gmr
Name: gmr_mRNA -> Gmr
Description: Translation of Gmr
Type: translation
Components:
Function Name Type Evidence Reference(s)
product Gmr protein nd nd
reactant gmr_mRNA RNA nd nd
c-di-GMP 5′pGpG
Name: c-di-GMP -> 5′pGpG
Description: Reaction transforming c-di-GMP into 5′pGpG
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product 5′pGpG simple molecule nd nd
reactant c-di-GMP simple molecule nd nd
osmY_mRNA OsmY
Name: osmY_mRNA -> OsmY
Description: Translation of OsmY
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant osmY_mRNA RNA nd nd
product OsmY protein nd nd
csgBAC_mRNA CsgC
Name: csgBAC_mRNA -> CsgC
Description: Translation of CsgC
Type: translation
Components:
Function Name Type Evidence Reference(s)
product CsgC protein nd nd
reactant csgBAC_mRNA RNA nd nd
mlrA_mRNA MlrA
Name: mlrA_mRNA -> MlrA
Description: Translation of MlrA
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant mlrA_mRNA RNA nd nd
product MlrA protein nd nd
hdeAB-yhiD_mRNA HdeB
Name: hdeAB-yhiD_mRNA -> HdeB
Description: Translation of HdeB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant hdeAB-yhiD_mRNA RNA nd nd
product HdeB protein nd nd
gadE-mdtEF_mRNA MdtF
Name: gadE-mdtEF_mRNA -> MdtF
Description: Translation of MdtF
Type: translation
Components:
Function Name Type Evidence Reference(s)
product MdtF protein nd nd
reactant gadE-mdtEF_mRNA RNA nd nd
csgDEFG_mRNA CsgD
Name: csgDEFG_mRNA -> CsgD
Description: Translation of CsgD
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant csgDEFG_mRNA RNA nd nd
product CsgD protein nd nd
hdeAB-yhiD_mRNA HdeA
Name: hdeAB-yhiD_mRNA -> HdeA
Description: Translation of HdeA
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant hdeAB-yhiD_mRNA RNA nd nd
product HdeA protein nd nd
csgDEFG_mRNA CsgG
Name: csgDEFG_mRNA -> CsgG
Description: Translation of CsgG
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant csgDEFG_mRNA RNA nd nd
product CsgG protein nd nd
csgBAC_mRNA CsgA
Name: csgBAC_mRNA -> CsgA
Description: Translation of CsgA
Type: translation
Components:
Function Name Type Evidence Reference(s)
product CsgA protein nd nd
reactant csgBAC_mRNA RNA nd nd
flhDC_mRNA FlhC
Name: flhDC_mRNA -> FlhC
Description: Translation of FlhC
Type: translation
Components:
Function Name Type Evidence Reference(s)
product FlhC protein nd nd
reactant flhDC_mRNA RNA nd nd



RegulonDB