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FlhDC Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
L-malate CcmA CcmB CcmC CcmD CcmE CcmF CcmG CcmH FlgA FlgB FlgC FlgD FlgE FlgF FlgG FlgH FlgI FlgJ FlgM FlgN FlhA FlhB FlhDC FlhE FliA FliD FliE FliF FliG FliH FliI FliJ FliK FliL FliM FliN FliO FliP FliQ FliR FliS FliT FliY FliZ GlpA GlpB GlpC GltI GltJ GltK GltL HydN HydB HypF asp asp_Ext L-glutamate L-glutamate_Ext Mdh MglA MglB MglC NapA NapB NapC NapD NapF NapG NapH NrfA NrfB NrfC NrfD NrfE NrfF NrfG PpdA PpdB PpdC RecC This Gensor Unit is not yet available YcgR YecR YgbK YgdB YhjH a 5'-phosphooligonucleotide a double stranded DNA a reduced cytochrome c552 ammonia an electron-transfer-related quinol an electron-transfer-related quinone an oxidized cytochrome c552 an ubiquinol ubiquinone beta-D-galactose beta-D-galactose_Ext carbamoyl-P cyclic di-3',5'-guanylate DHAP PP flgAMN flgAMN_mRNA flgBCDEFGHIJ flgBCDEFGHIJ_mRNA flhBAE flhBAE_mRNA fliAZY fliAZY_mRNA fliDST fliDST_mRNA fliE fliE_mRNA fliFGHIJK fliFGHIJK_mRNA fliLMNOPQR fliLMNOPQR_mRNA glpABC glpABC_mRNA gltI-sroC-gltJKL gltI-sroC-gltJKL_mRNA hydN-hypF hydN-hypF_mRNA HypE 5'pGpG mdh mdh_mRNA b-methyl-D-galactoside b-methyl-D-galactoside_Ext mglBAC mglBAC_mRNA napFDAGHBC-ccmABCDEFGH napFDAGHBC-ccmABCDEFGH_mRNA nitrate nitrite nrfABCDEFG nrfABCDEFG_mRNA oxalacetate phosphate ppdAB-ygdB-ppdC-recC ppdAB-ygdB-ppdC-recC_mRNA protoheme IX protoheme IX_Ext sn-glycerol-3-phosphate ycgR ycgR_mRNA yecR yecR_mRNA This Gensor Unit is not yet available This Gensor Unit is not yet available yhjH yhjH_mRNA NapB NapC NapH NapG NapA CcmC CcmE CcmD CcmB CcmA NrfD NrfC NrfB NrfA GltI GltK GltJ GltL MglA MglC MglB GlpA GlpB GlpC phosphate phosphate


Gensor Unit       
Name: FlhDC
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): GO:0045892 - negative regulation of transcription, DNA-templated
GO:0044036 - cell wall macromolecule metabolic process
GO:0043190 - ATP-binding cassette (ABC) transporter complex
GO:0044262 - cellular carbohydrate metabolic process
GO:0008270 - zinc ion binding
GO:0019333 - denitrification pathway
GO:0003700 - transcription factor activity, sequence-specific DNA binding
GO:0005048 - signal sequence binding
GO:0003824 - catalytic activity
GO:0009428 - bacterial-type flagellum basal body, distal rod, P ring
GO:0019563 - glycerol catabolic process
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Components:
Function Name Type
RNA yhjH_mRNA RNA


Reactions       
Showing 119 reactions
flgAMN flgAMN_mRNA
Name: flgAMN -> flgAMN_mRNA
Description: Transcription of transcription unit flgAMN; reaction activation by FlhDC.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant flgAMN gene nd nd
product flgAMN_mRNA RNA nd nd
flgBCDEFGHIJ flgBCDEFGHIJ_mRNA
Name: flgBCDEFGHIJ -> flgBCDEFGHIJ_mRNA
Description: Transcription of transcription unit flgBCDEFGHIJ; reaction activation by FlhDC.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant flgBCDEFGHIJ gene nd nd
product flgBCDEFGHIJ_mRNA RNA nd nd
flhBAE flhBAE_mRNA
Name: flhBAE -> flhBAE_mRNA
Description: Transcription of transcription unit flhBAE; reaction activation by FlhDC.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product flhBAE_mRNA RNA nd nd
reactant flhBAE gene nd nd
fliAZY fliAZY_mRNA
Name: fliAZY -> fliAZY_mRNA
Description: Transcription of transcription unit fliAZY; reaction activation by FlhDC.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product fliAZY_mRNA RNA nd nd
reactant fliAZY gene nd nd
fliDST fliDST_mRNA
Name: fliDST -> fliDST_mRNA
Description: Transcription of transcription unit fliDST; reaction activation by FlhDC.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product fliDST_mRNA RNA nd nd
reactant fliDST gene nd nd
fliE fliE_mRNA
Name: fliE -> fliE_mRNA
Description: Transcription of transcription unit fliE; reaction inhibition by CsgD.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant fliE gene nd nd
product fliE_mRNA RNA nd nd
fliFGHIJK fliFGHIJK_mRNA
Name: fliFGHIJK -> fliFGHIJK_mRNA
Description: Transcription of transcription unit fliFGHIJK; reaction inhibition by CsgD.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant fliFGHIJK gene nd nd
product fliFGHIJK_mRNA RNA nd nd
fliLMNOPQR fliLMNOPQR_mRNA
Name: fliLMNOPQR -> fliLMNOPQR_mRNA
Description: Transcription of transcription unit fliLMNOPQR; reaction activation by FlhDC.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant fliLMNOPQR gene nd nd
product fliLMNOPQR_mRNA RNA nd nd
glpABC glpABC_mRNA
Name: glpABC -> glpABC_mRNA
Description: Transcription of transcription unit glpABC; reaction activation by FlhDC.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product glpABC_mRNA RNA nd nd
reactant glpABC gene nd nd
gltI-sroC-gltJKL gltI-sroC-gltJKL_mRNA
Name: gltI-sroC-gltJKL -> gltI-sroC-gltJKL_mRNA
Description: Transcription of transcription unit gltI-sroC-gltJKL; reaction activation by FlhDC.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant gltI-sroC-gltJKL gene nd nd
product gltI-sroC-gltJKL_mRNA RNA nd nd
hydN-hypF hydN-hypF_mRNA
Name: hydN-hypF -> hydN-hypF_mRNA
Description: Transcription of transcription unit hydN-hypF; reaction activation by FhlA-Formate.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product hydN-hypF_mRNA RNA nd nd
reactant hydN-hypF gene nd nd
mdh mdh_mRNA
Name: mdh -> mdh_mRNA
Description: Transcription of transcription unit mdh; reaction activation by DpiA-Pasp.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product mdh_mRNA RNA nd nd
reactant mdh gene nd nd
mglBAC mglBAC_mRNA
Name: mglBAC -> mglBAC_mRNA
Description: Transcription of transcription unit mglBAC; reaction inhibition by FlhDC.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant mglBAC gene nd nd
product mglBAC_mRNA RNA nd nd
napFDAGHBC-ccmABCDEFGH napFDAGHBC-ccmABCDEFGH_mRNA
Name: napFDAGHBC-ccmABCDEFGH -> napFDAGHBC-ccmABCDEFGH_mRNA
Description: Transcription of transcription unit napFDAGHBC-ccmABCDEFGH; reaction activation by FlhDC.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product napFDAGHBC-ccmABCDEFGH_mRNA RNA nd nd
reactant napFDAGHBC-ccmABCDEFGH gene nd nd
nrfABCDEFG nrfABCDEFG_mRNA
Name: nrfABCDEFG -> nrfABCDEFG_mRNA
Description: Transcription of transcription unit nrfABCDEFG; reaction activation by FlhDC.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant nrfABCDEFG gene nd nd
product nrfABCDEFG_mRNA RNA nd nd
ppdAB-ygdB-ppdC-recC ppdAB-ygdB-ppdC-recC_mRNA
Name: ppdAB-ygdB-ppdC-recC -> ppdAB-ygdB-ppdC-recC_mRNA
Description: Transcription of transcription unit ppdAB-ygdB-ppdC-recC; reaction activation by FlhDC.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant ppdAB-ygdB-ppdC-recC gene nd nd
product ppdAB-ygdB-ppdC-recC_mRNA RNA nd nd
ycgR ycgR_mRNA
Name: ycgR -> ycgR_mRNA
Description: Transcription of transcription unit ycgR; reaction activation by FlhDC.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant ycgR gene nd nd
product ycgR_mRNA RNA nd nd
yecR yecR_mRNA
Name: yecR -> yecR_mRNA
Description: Transcription of transcription unit yecR; reaction activation by FlhDC.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant yecR gene nd nd
product yecR_mRNA RNA nd nd
ygbK ygbK_mRNA
Name: ygbK -> ygbK_mRNA
Description: Transcription of transcription unit ygbK; reaction activation by FlhDC.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product ygbK_mRNA RNA nd nd
reactant ygbK gene nd nd
yhjH yhjH_mRNA
Name: yhjH -> yhjH_mRNA
Description: Transcription of transcription unit yhjH; reaction activation by FlhDC.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product yhjH_mRNA RNA nd nd
reactant yhjH gene nd nd
fliFGHIJK_mRNA FliG
Name: fliFGHIJK_mRNA -> FliG
Description: Translation of FliG
Type: translation
Components:
Function Name Type Evidence Reference(s)
product FliG protein nd nd
reactant fliFGHIJK_mRNA RNA nd nd
napFDAGHBC-ccmABCDEFGH_mRNA NapC
Name: napFDAGHBC-ccmABCDEFGH_mRNA -> NapC
Description: Translation of NapC
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant napFDAGHBC-ccmABCDEFGH_mRNA RNA nd nd
product NapC protein nd nd
NapB + NapC + NapH + NapG + NapA NapB-NapC-NapH-NapG-NapA
Name: NapB + NapC + NapH + NapG + NapA -> NapB-NapC-NapH-NapG-NapA
Description: Reaction transforming NapB, NapC, NapH, NapG, NapA into NapB-NapC-NapH-NapG-NapA
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant NapG protein nd nd
reactant NapB protein nd nd
product NapB-NapC-NapH-NapG-NapA complex nd nd
reactant NapA protein nd nd
reactant NapH protein nd nd
reactant NapC protein nd nd
nitrate + an ubiquinol nitrite + ubiquinone
Name: nitrate + an ubiquinol -> nitrite + ubiquinone
Description: Reaction transforming nitrate, an ubiquinol into nitrite, ubiquinone
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product ubiquinone simple molecule nd nd
reactant an ubiquinol simple molecule nd nd
reactant nitrate simple molecule nd nd
product nitrite simple molecule nd nd
nrfABCDEFG_mRNA NrfG
Name: nrfABCDEFG_mRNA -> NrfG
Description: Translation of NrfG
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant nrfABCDEFG_mRNA RNA nd nd
product NrfG protein nd nd
fliFGHIJK_mRNA FliJ
Name: fliFGHIJK_mRNA -> FliJ
Description: Translation of FliJ
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant fliFGHIJK_mRNA RNA nd nd
product FliJ protein nd nd
fliLMNOPQR_mRNA FliM
Name: fliLMNOPQR_mRNA -> FliM
Description: Translation of FliM
Type: translation
Components:
Function Name Type Evidence Reference(s)
product FliM protein nd nd
reactant fliLMNOPQR_mRNA RNA nd nd
napFDAGHBC-ccmABCDEFGH_mRNA NapF
Name: napFDAGHBC-ccmABCDEFGH_mRNA -> NapF
Description: Translation of NapF
Type: translation
Components:
Function Name Type Evidence Reference(s)
product NapF protein nd nd
reactant napFDAGHBC-ccmABCDEFGH_mRNA RNA nd nd
fliAZY_mRNA FliZ
Name: fliAZY_mRNA -> FliZ
Description: Translation of FliZ
Type: translation
Components:
Function Name Type Evidence Reference(s)
product FliZ protein nd nd
reactant fliAZY_mRNA RNA nd nd
napFDAGHBC-ccmABCDEFGH_mRNA CcmE
Name: napFDAGHBC-ccmABCDEFGH_mRNA -> CcmE
Description: Translation of CcmE
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant napFDAGHBC-ccmABCDEFGH_mRNA RNA nd nd
product CcmE protein nd nd
CcmC + CcmE + CcmD + CcmB + CcmA CcmC-CcmE-CcmD-CcmB-CcmA
Name: CcmC + CcmE + CcmD + CcmB + CcmA -> CcmC-CcmE-CcmD-CcmB-CcmA
Description: Reaction transforming CcmC, CcmE, CcmD, CcmB, CcmA into CcmC-CcmE-CcmD-CcmB-CcmA
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product CcmC-CcmE-CcmD-CcmB-CcmA complex nd nd
reactant CcmD protein nd nd
reactant CcmA protein nd nd
reactant CcmB protein nd nd
reactant CcmE protein nd nd
reactant CcmC protein nd nd
protoheme IX_Ext phosphate + protoheme IX
Name: protoheme IX_Ext -> phosphate + protoheme IX
Description: Transport of protoheme IX_Ext through a bacterial membrane, leading to the presence of phosphate, protoheme IX inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product protoheme IX simple molecule nd nd
reactant protoheme IX_Ext simple molecule nd nd
product phosphate simple molecule nd nd
hydN-hypF_mRNA HypF
Name: hydN-hypF_mRNA -> HypF
Description: Translation of HypF
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant hydN-hypF_mRNA RNA nd nd
product HypF protein nd nd
carbamoyl-P + HypE HydB + PP + phosphate
Name: carbamoyl-P + HypE -> HydB + PP + phosphate
Description: Reaction transforming carbamoyl-P, HypE into HydB, PP , phosphate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant HypE simple molecule nd nd
product HydB simple molecule nd nd
product phosphate simple molecule nd nd
reactant carbamoyl-P simple molecule nd nd
product PP simple molecule nd nd
fliAZY_mRNA FliA
Name: fliAZY_mRNA -> FliA
Description: Translation of FliA
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant fliAZY_mRNA RNA nd nd
product FliA protein nd nd
napFDAGHBC-ccmABCDEFGH_mRNA CcmD
Name: napFDAGHBC-ccmABCDEFGH_mRNA -> CcmD
Description: Translation of CcmD
Type: translation
Components:
Function Name Type Evidence Reference(s)
product CcmD protein nd nd
reactant napFDAGHBC-ccmABCDEFGH_mRNA RNA nd nd
nrfABCDEFG_mRNA NrfF
Name: nrfABCDEFG_mRNA -> NrfF
Description: Translation of NrfF
Type: translation
Components:
Function Name Type Evidence Reference(s)
product NrfF protein nd nd
reactant nrfABCDEFG_mRNA RNA nd nd
nrfABCDEFG_mRNA NrfB
Name: nrfABCDEFG_mRNA -> NrfB
Description: Translation of NrfB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant nrfABCDEFG_mRNA RNA nd nd
product NrfB protein nd nd
NrfD + NrfC + NrfB + NrfA NrfD-NrfC-NrfB-NrfA
Name: NrfD + NrfC + NrfB + NrfA -> NrfD-NrfC-NrfB-NrfA
Description: Reaction transforming NrfD, NrfC, NrfB, NrfA into NrfD-NrfC-NrfB-NrfA
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant NrfB protein nd nd
reactant NrfA protein nd nd
product NrfD-NrfC-NrfB-NrfA complex nd nd
reactant NrfC protein nd nd
reactant NrfD protein nd nd
ammonia + an oxidized cytochrome c552 nitrite + a reduced cytochrome c552
Name: ammonia + an oxidized cytochrome c552 -> nitrite + a reduced cytochrome c552
Description: Reaction transforming ammonia, an oxidized cytochrome c552 into nitrite, a reduced cytochrome c552
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant ammonia simple molecule nd nd
product a reduced cytochrome c552 simple molecule nd nd
product nitrite simple molecule nd nd
reactant an oxidized cytochrome c552 simple molecule nd nd
yhjH_mRNA YhjH
Name: yhjH_mRNA -> YhjH
Description: Translation of YhjH
Type: translation
Components:
Function Name Type Evidence Reference(s)
product YhjH protein nd nd
reactant yhjH_mRNA RNA nd nd
c-di-GMP 5′pGpG
Name: c-di-GMP -> 5′pGpG
Description: Reaction transforming c-di-GMP into 5′pGpG
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product 5′pGpG simple molecule nd nd
reactant c-di-GMP simple molecule nd nd
nrfABCDEFG_mRNA NrfA
Name: nrfABCDEFG_mRNA -> NrfA
Description: Translation of NrfA
Type: translation
Components:
Function Name Type Evidence Reference(s)
product NrfA protein nd nd
reactant nrfABCDEFG_mRNA RNA nd nd
fliFGHIJK_mRNA FliK
Name: fliFGHIJK_mRNA -> FliK
Description: Translation of FliK
Type: translation
Components:
Function Name Type Evidence Reference(s)
product FliK protein nd nd
reactant fliFGHIJK_mRNA RNA nd nd
gltI-sroC-gltJKL_mRNA GltL
Name: gltI-sroC-gltJKL_mRNA -> GltL
Description: Translation of GltL
Type: translation
Components:
Function Name Type Evidence Reference(s)
product GltL protein nd nd
reactant gltI-sroC-gltJKL_mRNA RNA nd nd
GltI + GltK + GltJ + GltL GltI-GltK-GltJ-GltL
Name: GltI + GltK + GltJ + GltL -> GltI-GltK-GltJ-GltL
Description: Reaction transforming GltI, GltK, GltJ, GltL into GltI-GltK-GltJ-GltL
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant GltL protein nd nd
reactant GltK protein nd nd
reactant GltJ protein nd nd
product GltI-GltK-GltJ-GltL complex nd nd
reactant GltI protein nd nd
asp_Ext asp + phosphate
Name: asp_Ext -> asp + phosphate
Description: Transport of asp_Ext through a bacterial membrane, leading to the presence of asp, phosphate inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product phosphate simple molecule nd nd
product asp simple molecule nd nd
reactant asp_Ext simple molecule nd nd
L-glutamate_Ext phosphate + L-glutamate
Name: L-glutamate_Ext -> phosphate + L-glutamate
Description: Transport of L-glutamate_Ext through a bacterial membrane, leading to the presence of phosphate, L-glutamate inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product L-glutamate simple molecule nd nd
product phosphate simple molecule nd nd
reactant L-glutamate_Ext simple molecule nd nd
napFDAGHBC-ccmABCDEFGH_mRNA NapD
Name: napFDAGHBC-ccmABCDEFGH_mRNA -> NapD
Description: Translation of NapD
Type: translation
Components:
Function Name Type Evidence Reference(s)
product NapD protein nd nd
reactant napFDAGHBC-ccmABCDEFGH_mRNA RNA nd nd
napFDAGHBC-ccmABCDEFGH_mRNA NapA
Name: napFDAGHBC-ccmABCDEFGH_mRNA -> NapA
Description: Translation of NapA
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant napFDAGHBC-ccmABCDEFGH_mRNA RNA nd nd
product NapA protein nd nd
ppdAB-ygdB-ppdC-recC_mRNA RecC
Name: ppdAB-ygdB-ppdC-recC_mRNA -> RecC
Description: Translation of RecC
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant ppdAB-ygdB-ppdC-recC_mRNA RNA nd nd
product RecC protein nd nd
a double stranded DNA a 5′-phosphooligonucleotide
Name: a double stranded DNA -> a 5′-phosphooligonucleotide
Description: Reaction transforming a double stranded DNA into a 5′-phosphooligonucleotide
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product a 5′-phosphooligonucleotide simple molecule nd nd
reactant a double stranded DNA simple molecule nd nd
fliFGHIJK_mRNA FliF
Name: fliFGHIJK_mRNA -> FliF
Description: Translation of FliF
Type: translation
Components:
Function Name Type Evidence Reference(s)
product FliF protein nd nd
reactant fliFGHIJK_mRNA RNA nd nd
flhBAE_mRNA FlhE
Name: flhBAE_mRNA -> FlhE
Description: Translation of FlhE
Type: translation
Components:
Function Name Type Evidence Reference(s)
product FlhE protein nd nd
reactant flhBAE_mRNA RNA nd nd
napFDAGHBC-ccmABCDEFGH_mRNA CcmB
Name: napFDAGHBC-ccmABCDEFGH_mRNA -> CcmB
Description: Translation of CcmB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant napFDAGHBC-ccmABCDEFGH_mRNA RNA nd nd
product CcmB protein nd nd
flgAMN_mRNA FlgM
Name: flgAMN_mRNA -> FlgM
Description: Translation of FlgM
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant flgAMN_mRNA RNA nd nd
product FlgM protein nd nd
gltI-sroC-gltJKL_mRNA GltJ
Name: gltI-sroC-gltJKL_mRNA -> GltJ
Description: Translation of GltJ
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant gltI-sroC-gltJKL_mRNA RNA nd nd
product GltJ protein nd nd
flgBCDEFGHIJ_mRNA FlgE
Name: flgBCDEFGHIJ_mRNA -> FlgE
Description: Translation of FlgE
Type: translation
Components:
Function Name Type Evidence Reference(s)
product FlgE protein nd nd
reactant flgBCDEFGHIJ_mRNA RNA nd nd
flgBCDEFGHIJ_mRNA FlgB
Name: flgBCDEFGHIJ_mRNA -> FlgB
Description: Translation of FlgB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant flgBCDEFGHIJ_mRNA RNA nd nd
product FlgB protein nd nd
fliDST_mRNA FliD
Name: fliDST_mRNA -> FliD
Description: Translation of FliD
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant fliDST_mRNA RNA nd nd
product FliD protein nd nd
napFDAGHBC-ccmABCDEFGH_mRNA CcmH
Name: napFDAGHBC-ccmABCDEFGH_mRNA -> CcmH
Description: Translation of CcmH
Type: translation
Components:
Function Name Type Evidence Reference(s)
product CcmH protein nd nd
reactant napFDAGHBC-ccmABCDEFGH_mRNA RNA nd nd
gltI-sroC-gltJKL_mRNA SroC small RNA
Name: gltI-sroC-gltJKL_mRNA -> SroC small RNA
Description: Translation of SroC small RNA
Type: translation
Components:
Function Name Type Evidence Reference(s)
product SroC small RNA RNA nd nd
reactant gltI-sroC-gltJKL_mRNA RNA nd nd
fliDST_mRNA FliT
Name: fliDST_mRNA -> FliT
Description: Translation of FliT
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant fliDST_mRNA RNA nd nd
product FliT protein nd nd
fliLMNOPQR_mRNA FliQ
Name: fliLMNOPQR_mRNA -> FliQ
Description: Translation of FliQ
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant fliLMNOPQR_mRNA RNA nd nd
product FliQ protein nd nd
ppdAB-ygdB-ppdC-recC_mRNA PpdB
Name: ppdAB-ygdB-ppdC-recC_mRNA -> PpdB
Description: Translation of PpdB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant ppdAB-ygdB-ppdC-recC_mRNA RNA nd nd
product PpdB protein nd nd
mglBAC_mRNA MglB
Name: mglBAC_mRNA -> MglB
Description: Translation of MglB
Type: translation
Components:
Function Name Type Evidence Reference(s)
product MglB protein nd nd
reactant mglBAC_mRNA RNA nd nd
MglA + MglC + MglB MglA-MglC-MglB
Name: MglA + MglC + MglB -> MglA-MglC-MglB
Description: Reaction transforming MglA, MglC, MglB into MglA-MglC-MglB
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant MglC protein nd nd
product MglA-MglC-MglB complex nd nd
reactant MglB protein nd nd
reactant MglA protein nd nd
b-methyl-D-galactoside_Ext b-methyl-D-galactoside + phosphate
Name: b-methyl-D-galactoside_Ext -> b-methyl-D-galactoside + phosphate
Description: Transport of b-methyl-D-galactoside_Ext through a bacterial membrane, leading to the presence of b-methyl-D-galactoside, phosphate inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant b-methyl-D-galactoside_Ext simple molecule nd nd
product b-methyl-D-galactoside simple molecule nd nd
product phosphate simple molecule nd nd
beta-D-galactose_Ext phosphate + beta-D-galactose
Name: beta-D-galactose_Ext -> phosphate + beta-D-galactose
Description: Transport of beta-D-galactose_Ext through a bacterial membrane, leading to the presence of phosphate, beta-D-galactose inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant beta-D-galactose_Ext simple molecule nd nd
product phosphate simple molecule nd nd
product beta-D-galactose simple molecule nd nd
nrfABCDEFG_mRNA NrfC
Name: nrfABCDEFG_mRNA -> NrfC
Description: Translation of NrfC
Type: translation
Components:
Function Name Type Evidence Reference(s)
product NrfC protein nd nd
reactant nrfABCDEFG_mRNA RNA nd nd
napFDAGHBC-ccmABCDEFGH_mRNA CcmA
Name: napFDAGHBC-ccmABCDEFGH_mRNA -> CcmA
Description: Translation of CcmA
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant napFDAGHBC-ccmABCDEFGH_mRNA RNA nd nd
product CcmA protein nd nd
flgBCDEFGHIJ_mRNA FlgD
Name: flgBCDEFGHIJ_mRNA -> FlgD
Description: Translation of FlgD
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant flgBCDEFGHIJ_mRNA RNA nd nd
product FlgD protein nd nd
flgBCDEFGHIJ_mRNA FlgC
Name: flgBCDEFGHIJ_mRNA -> FlgC
Description: Translation of FlgC
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant flgBCDEFGHIJ_mRNA RNA nd nd
product FlgC protein nd nd
nrfABCDEFG_mRNA NrfE
Name: nrfABCDEFG_mRNA -> NrfE
Description: Translation of NrfE
Type: translation
Components:
Function Name Type Evidence Reference(s)
product NrfE protein nd nd
reactant nrfABCDEFG_mRNA RNA nd nd
flgAMN_mRNA FlgN
Name: flgAMN_mRNA -> FlgN
Description: Translation of FlgN
Type: translation
Components:
Function Name Type Evidence Reference(s)
product FlgN protein nd nd
reactant flgAMN_mRNA RNA nd nd
mdh_mRNA Mdh
Name: mdh_mRNA -> Mdh
Description: Translation of Mdh
Type: translation
Components:
Function Name Type Evidence Reference(s)
product Mdh protein nd nd
reactant mdh_mRNA RNA nd nd
L-malate oxalacetate
Name: L-malate -> oxalacetate
Description: Reaction transforming L-malate into oxalacetate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product oxalacetate simple molecule nd nd
reactant L-malate simple molecule nd nd