RegulonDB RegulonDB

FhlA Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
CO2 FdhF FhlA FocB formate GDP GTP HycA HycB HycC HycD HycE HycF HycG HycH HycI HydN HyfA HyfB HyfC HyfD HyfE HyfF HyfG HyfH HyfI HyfJ HyfR HypA HypB HypC HypD HypE HypF C terminal 32 amino-acid peptide carbamoyl-P fdhF fdhF_mRNA formate hycABCDEFGHI hycABCDEFGHI_mRNA hydN-hypF hydN-hypF_mRNA hyfABCDEFGHIJR-focB hyfABCDEFGHIJR-focB_mRNA hypABCDE-fhlA hypABCDE-fhlA_mRNA FhlA formate HyfG HyfI HyfA HyfB HyfC HyfD HyfE HyfF HyfH FdhF HycE HycB HycG HycF HycC HycD HycD HycC HycF HycG HycB HycE H+ H2 HypE carboxamide HycE HycE precursor H+ H2


Gensor Unit       
Name: FhlA
Description: Molecular biology level
Detailed: In the presence of formate, FhlA positively regulates the expression of genes ne required for formate transport and conversion to CO2 and maturation of hydrogenase isoenzymes. Under these conditions, FhlA is modified to FhlA-formate, binds its target sites and enables the expression of its regulated genes.
Less detailed: In the presence of formate, FhlA positively regulates the expression of genes needed for formate transport and conversion to CO2 and protein maturation.

Physiology level
Detailed: The presence of formate induces the expression of genes needful for formate transport and oxidation and protein maduration.
Less detailed: The presence of formate induces the expression of genes involved with formate transport and oxidation and protein maduration. Under these conditions the genes involved with for formate transport and conversion to CO2, and maturation of hydrogenases by carbamoylation and biosynthesis of cofactor, are expressed.
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): biological_process GO:0006352 - DNA-templated transcription, initiation
GO:0006464 - cellular protein modification process
GO:0006974 - cellular response to DNA damage stimulus
GO:0051188 - cofactor biosynthetic process
GO:0015944 - formate oxidation
GO:0015724 - formate transport
Read more >
cellular_component GO:0005737 - cytoplasm
GO:0005829 - cytosol
GO:0031234 - extrinsic component of cytoplasmic side of plasma membrane
GO:0009375 - ferredoxin hydrogenase complex
GO:0016021 - integral component of membrane
GO:0005887 - integral component of plasma membrane
GO:0005622 - intracellular
Read more >
molecular_function GO:0051539 - 4 iron, 4 sulfur cluster binding
GO:0003677 - DNA binding
GO:0003924 - GTPase activity
GO:0008137 - NADH dehydrogenase (ubiquinone) activity
GO:0003954 - NADH dehydrogenase activity
GO:0001150 - bacterial-type RNA polymerase enhancer sequence-specific DNA binding
GO:1902670 - carbon dioxide binding
Read more >
Components: Show/Hide Components Table (66 more...)
Function Name Type
simple_molecule A(H2) simple_molecule
simple_molecule C terminal 32 amino-acid peptide simple_molecule
simple_molecule CO2 simple_molecule
protein FdhF protein
complex FdhF-HycE-HycB-HycG-HycF-HycC-HycD complex
protein FhlA protein
complex FhlA-formate complex
protein FocB protein
protein HycA protein
protein HycB protein
protein HycC protein
protein HycD protein
complex HycD-HycC-HycF-HycG-HycB-HycE complex
protein HycE protein
protein HycF protein
protein HycG protein
protein HycH protein
protein HycI protein
simple_molecule HydB simple_molecule
protein HydN protein
protein HyfA protein
protein HyfB protein
protein HyfC protein
protein HyfD protein
protein HyfE protein
protein HyfF protein
protein HyfG protein
complex HyfG-HyfI-HyfA-HyfB-HyfC-HyfD-HyfE-HyfF-HyfH complex
protein HyfH protein
protein HyfI protein
protein HyfJ protein
protein HyfR protein
protein HypA protein
complex HypA-HypB complex
protein HypB protein
protein HypC protein
protein HypD protein
complex HypD-HypC complex
simple_molecule HypE simple_molecule
protein HypF protein
simple_molecule O-carbamoyladenylate simple_molecule
simple_molecule acceptors simple_molecule
simple_molecule carbamoyl-P simple_molecule
simple_molecule diphosphate simple_molecule
simple_molecule electron simple_molecule
gene fdhF gene
RNA fdhF_mRNA RNA
simple_molecule formate simple_molecule
simple_molecule guanosine-diphosphate simple_molecule
simple_molecule guanosine-triphosphate simple_molecule
gene hycABCDEFGHI gene
RNA hycABCDEFGHI_mRNA RNA
gene hydN-hypF gene
RNA hydN-hypF_mRNA RNA
simple_molecule hydrogen simple_molecule
gene hyfABCDEFGHIJR-focB gene
RNA hyfABCDEFGHIJR-focB_mRNA RNA
gene hypABCDE gene
gene hypABCDE-fhlA gene
RNA hypABCDE-fhlA_mRNA RNA
RNA hypABCDE_mRNA RNA
simple_molecule large subunit of hydrogenase 3 simple_molecule
simple_molecule oxidized hydrogenase 3 simple_molecule
simple_molecule phosphate simple_molecule
simple_molecule precursor of large subunit of hydrogenase 3 simple_molecule
simple_molecule reduced hydrogenase 3 simple_molecule


Reactions       
Showing 57 reactions
formate + FhlA FhlA-formate
Name: formate + FhlA -> FhlA-formate
Description: Reaction transforming formate, FhlA into FhlA-formate
Type: state transition
Pathway Components: formate + FhlA -> FhlA-formate
Components:
Function Name Type Evidence Reference(s)
reactant FhlA protein nd nd
product FhlA-formate complex nd nd
reactant formate simple_molecule nd nd
FhlA-formate fdhF fdhF_mRNA
Name: fdhF -> fdhF_mRNA
Description: Transcription of transcription unit fdhF. Reaction activation by FhlA-formate.
Type: transcription
Pathway Components: fdhF - FhlA-formate -> fdhF_mRNA
Components:
Function Name Type Evidence Reference(s)
activator FhlA-formate complex nd nd
reactant fdhF gene nd nd
product fdhF_mRNA RNA nd nd
FhlA-formate hycABCDEFGHI hycABCDEFGHI_mRNA
Name: hycABCDEFGHI -> hycABCDEFGHI_mRNA
Description: Transcription of transcription unit hycABCDEFGHI. Reaction activation by FhlA-formate.
Type: transcription
Pathway Components: hycABCDEFGHI - FhlA-formate -> hycABCDEFGHI_mRNA
Components:
Function Name Type Evidence Reference(s)
activator FhlA-formate complex nd nd
reactant hycABCDEFGHI gene nd nd
product hycABCDEFGHI_mRNA RNA nd nd
FhlA-formate hydN-hypF hydN-hypF_mRNA
Name: hydN-hypF -> hydN-hypF_mRNA
Description: Transcription of transcription unit hydN-hypF. Reaction activation by FhlA-formate.
Type: transcription
Pathway Components: hydN-hypF - FhlA-formate -> hydN-hypF_mRNA
Components:
Function Name Type Evidence Reference(s)
activator FhlA-formate complex nd nd
reactant hydN-hypF gene nd nd
product hydN-hypF_mRNA RNA nd nd
FhlA-formate hyfABCDEFGHIJR-focB hyfABCDEFGHIJR-focB_mRNA
Name: hyfABCDEFGHIJR-focB -> hyfABCDEFGHIJR-focB_mRNA
Description: Transcription of transcription unit hyfABCDEFGHIJR-focB. Reaction activation by FhlA-formate.
Type: transcription
Pathway Components: hyfABCDEFGHIJR-focB - FhlA-formate -> hyfABCDEFGHIJR-focB_mRNA
Components:
Function Name Type Evidence Reference(s)
activator FhlA-formate complex nd nd
reactant hyfABCDEFGHIJR-focB gene nd nd
product hyfABCDEFGHIJR-focB_mRNA RNA nd nd
FhlA-formate hypABCDE-fhlA hypABCDE-fhlA_mRNA
Name: hypABCDE-fhlA -> hypABCDE-fhlA_mRNA
Description: Transcription of transcription unit hypABCDE-fhlA. Reaction activation by FhlA-formate.
Type: transcription
Pathway Components: hypABCDE-fhlA - FhlA-formate -> hypABCDE-fhlA_mRNA
Components:
Function Name Type Evidence Reference(s)
activator FhlA-formate complex nd nd
reactant hypABCDE-fhlA gene nd nd
product hypABCDE-fhlA_mRNA RNA nd nd
FhlA hypABCDE hypABCDE_mRNA
Name: hypABCDE -> hypABCDE_mRNA
Description: Transcription of transcription unit hypABCDE. Reaction activation by FhlA.
Type: transcription
Pathway Components: hypABCDE - FhlA -> hypABCDE_mRNA
Components:
Function Name Type Evidence Reference(s)
activator FhlA protein nd nd
reactant hypABCDE gene nd nd
product hypABCDE_mRNA RNA nd nd
hycABCDEFGHI_mRNA HycA
Name: hycABCDEFGHI_mRNA -> HycA
Description: Translation of HycA
Type: translation
Pathway Components: hycABCDEFGHI_mRNA -> HycA
Components:
Function Name Type Evidence Reference(s)
product HycA protein nd nd
reactant hycABCDEFGHI_mRNA RNA nd nd
hycABCDEFGHI_mRNA HycB
Name: hycABCDEFGHI_mRNA -> HycB
Description: Translation of HycB
Type: translation
Pathway Components: hycABCDEFGHI_mRNA -> HycB
Components:
Function Name Type Evidence Reference(s)
product HycB protein nd nd
reactant hycABCDEFGHI_mRNA RNA nd nd
HycB + HycG + HycD + HycE + HycF + HycC HycD-HycC-HycF-HycG-HycB-HycE
Name: HycB + HycG + HycD + HycE + HycF + HycC -> HycD-HycC-HycF-HycG-HycB-HycE
Description: Reaction transforming HycB, HycG, HycD, HycE, HycF, HycC into HycD-HycC-HycF-HycG-HycB-HycE
Type: state transition
Pathway Components: HycB + HycG + HycD + HycE + HycF + HycC -> HycD-HycC-HycF-HycG-HycB-HycE
Components:
Function Name Type Evidence Reference(s)
reactant HycB protein nd nd
reactant HycC protein nd nd
reactant HycD protein nd nd
product HycD-HycC-HycF-HycG-HycB-HycE complex nd nd
reactant HycE protein nd nd
reactant HycF protein nd nd
reactant HycG protein nd nd
HycD-HycC-HycF-HycG-HycB-HycE reduced hydrogenase 3 oxidized hydrogenase 3 + hydrogen
Name: reduced hydrogenase 3 -> oxidized hydrogenase 3 + hydrogen
Description: Reaction transforming reduced hydrogenase 3 into oxidized hydrogenase 3, hydrogen
Type: state transition
Pathway Components: reduced hydrogenase 3 - HycD-HycC-HycF-HycG-HycB-HycE -> oxidized hydrogenase 3 + hydrogen
Components:
Function Name Type Evidence Reference(s)
catalyzer HycD-HycC-HycF-HycG-HycB-HycE complex nd nd
product hydrogen simple_molecule nd nd
product oxidized hydrogenase 3 simple_molecule nd nd
reactant reduced hydrogenase 3 simple_molecule nd nd
hycABCDEFGHI_mRNA HycC
Name: hycABCDEFGHI_mRNA -> HycC
Description: Translation of HycC
Type: translation
Pathway Components: hycABCDEFGHI_mRNA -> HycC
Components:
Function Name Type Evidence Reference(s)
product HycC protein nd nd
reactant hycABCDEFGHI_mRNA RNA nd nd
hycABCDEFGHI_mRNA HycD
Name: hycABCDEFGHI_mRNA -> HycD
Description: Translation of HycD
Type: translation
Pathway Components: hycABCDEFGHI_mRNA -> HycD
Components:
Function Name Type Evidence Reference(s)
product HycD protein nd nd
reactant hycABCDEFGHI_mRNA RNA nd nd
hycABCDEFGHI_mRNA HycE
Name: hycABCDEFGHI_mRNA -> HycE
Description: Translation of HycE
Type: translation
Pathway Components: hycABCDEFGHI_mRNA -> HycE
Components:
Function Name Type Evidence Reference(s)
product HycE protein nd nd
reactant hycABCDEFGHI_mRNA RNA nd nd
hycABCDEFGHI_mRNA HycF
Name: hycABCDEFGHI_mRNA -> HycF
Description: Translation of HycF
Type: translation
Pathway Components: hycABCDEFGHI_mRNA -> HycF
Components:
Function Name Type Evidence Reference(s)
product HycF protein nd nd
reactant hycABCDEFGHI_mRNA RNA nd nd
hycABCDEFGHI_mRNA HycG
Name: hycABCDEFGHI_mRNA -> HycG
Description: Translation of HycG
Type: translation
Pathway Components: hycABCDEFGHI_mRNA -> HycG
Components:
Function Name Type Evidence Reference(s)
product HycG protein nd nd
reactant hycABCDEFGHI_mRNA RNA nd nd
hycABCDEFGHI_mRNA HycH
Name: hycABCDEFGHI_mRNA -> HycH
Description: Translation of HycH
Type: translation
Pathway Components: hycABCDEFGHI_mRNA -> HycH
Components:
Function Name Type Evidence Reference(s)
product HycH protein nd nd
reactant hycABCDEFGHI_mRNA RNA nd nd
hycABCDEFGHI_mRNA HycI
Name: hycABCDEFGHI_mRNA -> HycI
Description: Translation of HycI
Type: translation
Pathway Components: hycABCDEFGHI_mRNA -> HycI
Components:
Function Name Type Evidence Reference(s)
product HycI protein nd nd
reactant hycABCDEFGHI_mRNA RNA nd nd
HycI precursor of large subunit of hydrogenase 3 Products
Name: precursor of large subunit of hydrogenase 3 -> C terminal 32 amino-acid peptide + large subunit of hydrogenase 3
Description: Reaction transforming precursor of large subunit of hydrogenase 3 into C terminal 32 amino-acid peptide, large subunit of hydrogenase 3
Type: state transition
Pathway Components: precursor of large subunit of hydrogenase 3 - HycI -> C terminal 32 amino-acid peptide + large subunit of hydrogenase 3
Components:
Function Name Type Evidence Reference(s)
product C terminal 32 amino-acid peptide simple_molecule nd nd
catalyzer HycI protein nd nd
product large subunit of hydrogenase 3 simple_molecule nd nd
reactant precursor of large subunit of hydrogenase 3 simple_molecule nd nd
hyfABCDEFGHIJR-focB_mRNA HyfA
Name: hyfABCDEFGHIJR-focB_mRNA -> HyfA
Description: Translation of HyfA
Type: translation
Pathway Components: hyfABCDEFGHIJR-focB_mRNA -> HyfA
Components:
Function Name Type Evidence Reference(s)
product HyfA protein nd nd
reactant hyfABCDEFGHIJR-focB_mRNA RNA nd nd
Protein Monomers HyfG-HyfI-HyfA-HyfB-HyfC-HyfD-HyfE-HyfF-HyfH
Name: HyfG + HyfH + HyfC + HyfB + HyfE + HyfI + HyfF + HyfA + HyfD -> HyfG-HyfI-HyfA-HyfB-HyfC-HyfD-HyfE-HyfF-HyfH
Description: Reaction transforming HyfG, HyfH, HyfC, HyfB, HyfE, HyfI, HyfF, HyfA, HyfD into HyfG-HyfI-HyfA-HyfB-HyfC-HyfD-HyfE-HyfF-HyfH
Type: state transition
Pathway Components: HyfG + HyfH + HyfC + HyfB + HyfE + HyfI + HyfF + HyfA + HyfD -> HyfG-HyfI-HyfA-HyfB-HyfC-HyfD-HyfE-HyfF-HyfH
Components: Show/Hide Components Table
HyfG-HyfI-HyfA-HyfB-HyfC-HyfD-HyfE-HyfF-HyfH electron hydrogen
Name: electron -> hydrogen
Description: Reaction transforming electron into hydrogen
Type: state transition
Pathway Components: electron - HyfG-HyfI-HyfA-HyfB-HyfC-HyfD-HyfE-HyfF-HyfH -> hydrogen
Components:
Function Name Type Evidence Reference(s)
catalyzer HyfG-HyfI-HyfA-HyfB-HyfC-HyfD-HyfE-HyfF-HyfH complex nd nd
reactant electron simple_molecule nd nd
product hydrogen simple_molecule nd nd
hyfABCDEFGHIJR-focB_mRNA HyfB
Name: hyfABCDEFGHIJR-focB_mRNA -> HyfB
Description: Translation of HyfB
Type: translation
Pathway Components: hyfABCDEFGHIJR-focB_mRNA -> HyfB
Components:
Function Name Type Evidence Reference(s)
product HyfB protein nd nd
reactant hyfABCDEFGHIJR-focB_mRNA RNA nd nd
hyfABCDEFGHIJR-focB_mRNA HyfC
Name: hyfABCDEFGHIJR-focB_mRNA -> HyfC
Description: Translation of HyfC
Type: translation
Pathway Components: hyfABCDEFGHIJR-focB_mRNA -> HyfC
Components:
Function Name Type Evidence Reference(s)
product HyfC protein nd nd
reactant hyfABCDEFGHIJR-focB_mRNA RNA nd nd
hyfABCDEFGHIJR-focB_mRNA HyfD
Name: hyfABCDEFGHIJR-focB_mRNA -> HyfD
Description: Translation of HyfD
Type: translation
Pathway Components: hyfABCDEFGHIJR-focB_mRNA -> HyfD
Components:
Function Name Type Evidence Reference(s)
product HyfD protein nd nd
reactant hyfABCDEFGHIJR-focB_mRNA RNA nd nd
hyfABCDEFGHIJR-focB_mRNA HyfE
Name: hyfABCDEFGHIJR-focB_mRNA -> HyfE
Description: Translation of HyfE
Type: translation
Pathway Components: hyfABCDEFGHIJR-focB_mRNA -> HyfE
Components:
Function Name Type Evidence Reference(s)
product HyfE protein nd nd
reactant hyfABCDEFGHIJR-focB_mRNA RNA nd nd
hyfABCDEFGHIJR-focB_mRNA HyfF
Name: hyfABCDEFGHIJR-focB_mRNA -> HyfF
Description: Translation of HyfF
Type: translation
Pathway Components: hyfABCDEFGHIJR-focB_mRNA -> HyfF
Components:
Function Name Type Evidence Reference(s)
product HyfF protein nd nd
reactant hyfABCDEFGHIJR-focB_mRNA RNA nd nd
hyfABCDEFGHIJR-focB_mRNA HyfG
Name: hyfABCDEFGHIJR-focB_mRNA -> HyfG
Description: Translation of HyfG
Type: translation
Pathway Components: hyfABCDEFGHIJR-focB_mRNA -> HyfG
Components:
Function Name Type Evidence Reference(s)
product HyfG protein nd nd
reactant hyfABCDEFGHIJR-focB_mRNA RNA nd nd
hyfABCDEFGHIJR-focB_mRNA HyfH
Name: hyfABCDEFGHIJR-focB_mRNA -> HyfH
Description: Translation of HyfH
Type: translation
Pathway Components: hyfABCDEFGHIJR-focB_mRNA -> HyfH
Components:
Function Name Type Evidence Reference(s)
product HyfH protein nd nd
reactant hyfABCDEFGHIJR-focB_mRNA RNA nd nd
hyfABCDEFGHIJR-focB_mRNA HyfI
Name: hyfABCDEFGHIJR-focB_mRNA -> HyfI
Description: Translation of HyfI
Type: translation
Pathway Components: hyfABCDEFGHIJR-focB_mRNA -> HyfI
Components:
Function Name Type Evidence Reference(s)
product HyfI protein nd nd
reactant hyfABCDEFGHIJR-focB_mRNA RNA nd nd
hyfABCDEFGHIJR-focB_mRNA HyfJ
Name: hyfABCDEFGHIJR-focB_mRNA -> HyfJ
Description: Translation of HyfJ
Type: translation
Pathway Components: hyfABCDEFGHIJR-focB_mRNA -> HyfJ
Components:
Function Name Type Evidence Reference(s)
product HyfJ protein nd nd
reactant hyfABCDEFGHIJR-focB_mRNA RNA nd nd
hyfABCDEFGHIJR-focB_mRNA HyfR
Name: hyfABCDEFGHIJR-focB_mRNA -> HyfR
Description: Translation of HyfR
Type: translation
Pathway Components: hyfABCDEFGHIJR-focB_mRNA -> HyfR
Components:
Function Name Type Evidence Reference(s)
product HyfR protein nd nd
reactant hyfABCDEFGHIJR-focB_mRNA RNA nd nd
hyfABCDEFGHIJR-focB_mRNA FocB
Name: hyfABCDEFGHIJR-focB_mRNA -> FocB
Description: Translation of FocB
Type: translation
Pathway Components: hyfABCDEFGHIJR-focB_mRNA -> FocB
Components:
Function Name Type Evidence Reference(s)
product FocB protein nd nd
reactant hyfABCDEFGHIJR-focB_mRNA RNA nd nd
hypABCDE_mRNA HypA
Name: hypABCDE_mRNA -> HypA
Description: Translation of HypA
Type: translation
Pathway Components: hypABCDE_mRNA -> HypA
Components:
Function Name Type Evidence Reference(s)
product HypA protein nd nd
reactant hypABCDE_mRNA RNA nd nd
HypA + HypB HypA-HypB
Name: HypA + HypB -> HypA-HypB
Description: Reaction transforming HypA, HypB into HypA-HypB
Type: state transition
Pathway Components: HypA + HypB -> HypA-HypB
Components:
Function Name Type Evidence Reference(s)
reactant HypA protein nd nd
product HypA-HypB complex nd nd
reactant HypB protein nd nd
hypABCDE_mRNA HypB
Name: hypABCDE_mRNA -> HypB
Description: Translation of HypB
Type: translation
Pathway Components: hypABCDE_mRNA -> HypB
Components:
Function Name Type Evidence Reference(s)
product HypB protein nd nd
reactant hypABCDE_mRNA RNA nd nd
HypB guanosine-triphosphate guanosine-diphosphate + phosphate
Name: guanosine-triphosphate -> guanosine-diphosphate + phosphate
Description: Reaction transforming guanosine-triphosphate into guanosine-diphosphate, phosphate
Type: state transition
Pathway Components: guanosine-triphosphate - HypB -> guanosine-diphosphate + phosphate
Components:
Function Name Type Evidence Reference(s)
catalyzer HypB protein nd nd
product guanosine-diphosphate simple_molecule nd nd
reactant guanosine-triphosphate simple_molecule nd nd
product phosphate simple_molecule nd nd
hypABCDE_mRNA HypC
Name: hypABCDE_mRNA -> HypC
Description: Translation of HypC
Type: translation
Pathway Components: hypABCDE_mRNA -> HypC
Components:
Function Name Type Evidence Reference(s)
product HypC protein nd nd
reactant hypABCDE_mRNA RNA nd nd
HypC + HypD HypD-HypC
Name: HypC + HypD -> HypD-HypC
Description: Reaction transforming HypC, HypD into HypD-HypC
Type: state transition
Pathway Components: HypC + HypD -> HypD-HypC
Components:
Function Name Type Evidence Reference(s)
reactant HypC protein nd nd
reactant HypD protein nd nd
product HypD-HypC complex nd nd
hypABCDE_mRNA HypD
Name: hypABCDE_mRNA -> HypD
Description: Translation of HypD
Type: translation
Pathway Components: hypABCDE_mRNA -> HypD
Components:
Function Name Type Evidence Reference(s)
product HypD protein nd nd
reactant hypABCDE_mRNA RNA nd nd
hypABCDE_mRNA HypE
Name: hypABCDE_mRNA -> HypE
Description: Translation of HypE
Type: translation
Pathway Components: hypABCDE_mRNA -> HypE
Components:
Function Name Type Evidence Reference(s)
product HypE simple_molecule nd nd
reactant hypABCDE_mRNA RNA nd nd
hypABCDE-fhlA_mRNA HypA
Name: hypABCDE-fhlA_mRNA -> HypA
Description: Translation of HypA
Type: translation
Pathway Components: hypABCDE-fhlA_mRNA -> HypA
Components:
Function Name Type Evidence Reference(s)
product HypA protein nd nd
reactant hypABCDE-fhlA_mRNA RNA nd nd
hypABCDE-fhlA_mRNA HypB
Name: hypABCDE-fhlA_mRNA -> HypB
Description: Translation of HypB
Type: translation
Pathway Components: hypABCDE-fhlA_mRNA -> HypB
Components:
Function Name Type Evidence Reference(s)
product HypB protein nd nd
reactant hypABCDE-fhlA_mRNA RNA nd nd
hypABCDE-fhlA_mRNA HypC
Name: hypABCDE-fhlA_mRNA -> HypC
Description: Translation of HypC
Type: translation
Pathway Components: hypABCDE-fhlA_mRNA -> HypC
Components:
Function Name Type Evidence Reference(s)
product HypC protein nd nd
reactant hypABCDE-fhlA_mRNA RNA nd nd
hypABCDE-fhlA_mRNA HypD
Name: hypABCDE-fhlA_mRNA -> HypD
Description: Translation of HypD
Type: translation
Pathway Components: hypABCDE-fhlA_mRNA -> HypD
Components:
Function Name Type Evidence Reference(s)
product HypD protein nd nd
reactant hypABCDE-fhlA_mRNA RNA nd nd
hypABCDE-fhlA_mRNA HypE
Name: hypABCDE-fhlA_mRNA -> HypE
Description: Translation of HypE
Type: translation
Pathway Components: hypABCDE-fhlA_mRNA -> HypE
Components:
Function Name Type Evidence Reference(s)
product HypE simple_molecule nd nd
reactant hypABCDE-fhlA_mRNA RNA nd nd
hypABCDE-fhlA_mRNA FhlA
Name: hypABCDE-fhlA_mRNA -> FhlA
Description: Translation of FhlA
Type: translation
Pathway Components: hypABCDE-fhlA_mRNA -> FhlA
Components:
Function Name Type Evidence Reference(s)
product FhlA protein nd nd
reactant hypABCDE-fhlA_mRNA RNA nd nd
fdhF_mRNA FdhF
Name: fdhF_mRNA -> FdhF
Description: Translation of FdhF
Type: translation
Pathway Components: fdhF_mRNA -> FdhF
Components:
Function Name Type Evidence Reference(s)
product FdhF protein nd nd
reactant fdhF_mRNA RNA nd nd
HycD + HycG + HycB + HycE + FdhF + HycF + HycC FdhF-HycE-HycB-HycG-HycF-HycC-HycD
Name: HycD + HycG + HycB + HycE + FdhF + HycF + HycC -> FdhF-HycE-HycB-HycG-HycF-HycC-HycD
Description: Reaction transforming HycD, HycG, HycB, HycE, FdhF, HycF, HycC into FdhF-HycE-HycB-HycG-HycF-HycC-HycD
Type: state transition
Pathway Components: HycD + HycG + HycB + HycE + FdhF + HycF + HycC -> FdhF-HycE-HycB-HycG-HycF-HycC-HycD
Components:
Function Name Type Evidence Reference(s)
reactant FdhF protein nd nd
product FdhF-HycE-HycB-HycG-HycF-HycC-HycD complex nd nd
reactant HycB protein nd nd
reactant HycC protein nd nd
reactant HycD protein nd nd
reactant HycE protein nd nd
reactant HycF protein nd nd
reactant HycG protein nd nd
FdhF-HycE-HycB-HycG-HycF-HycC-HycD formate hydrogen + CO2
Name: formate -> hydrogen + CO2
Description: Reaction transforming formate into hydrogen, CO2
Type: state transition
Pathway Components: formate - FdhF-HycE-HycB-HycG-HycF-HycC-HycD -> hydrogen + CO2
Components:
Function Name Type Evidence Reference(s)
product CO2 simple_molecule nd nd
catalyzer FdhF-HycE-HycB-HycG-HycF-HycC-HycD complex nd nd
reactant formate simple_molecule nd nd
product hydrogen simple_molecule nd nd
FdhF oxidized hydrogenase 3 + formate reduced hydrogenase 3 + CO2
Name: oxidized hydrogenase 3 + formate -> reduced hydrogenase 3 + CO2
Description: Reaction transforming oxidized hydrogenase 3, formate into reduced hydrogenase 3, CO2
Type: state transition
Pathway Components: oxidized hydrogenase 3 + formate - FdhF -> reduced hydrogenase 3 + CO2
Components:
Function Name Type Evidence Reference(s)
product CO2 simple_molecule nd nd
catalyzer FdhF protein nd nd
reactant formate simple_molecule nd nd
reactant oxidized hydrogenase 3 simple_molecule nd nd
product reduced hydrogenase 3 simple_molecule nd nd
FdhF acceptors + formate A(H2) + CO2
Name: acceptors + formate -> A(H2) + CO2
Description: Reaction transforming acceptors, formate into A(H2), CO2
Type: state transition
Pathway Components: acceptors + formate - FdhF -> A(H2) + CO2
Components:
Function Name Type Evidence Reference(s)
product A(H2) simple_molecule nd nd
product CO2 simple_molecule nd nd
catalyzer FdhF protein nd nd
reactant acceptors simple_molecule nd nd
reactant formate simple_molecule nd nd
hydN-hypF_mRNA HydN
Name: hydN-hypF_mRNA -> HydN
Description: Translation of HydN
Type: translation
Pathway Components: hydN-hypF_mRNA -> HydN
Components:
Function Name Type Evidence Reference(s)
product HydN protein nd nd
reactant hydN-hypF_mRNA RNA nd nd
hydN-hypF_mRNA HypF
Name: hydN-hypF_mRNA -> HypF
Description: Translation of HypF
Type: translation
Pathway Components: hydN-hypF_mRNA -> HypF
Components:
Function Name Type Evidence Reference(s)
product HypF protein nd nd
reactant hydN-hypF_mRNA RNA nd nd
HypF carbamoyl-P + HypE diphosphate + phosphate + HydB
Name: carbamoyl-P + HypE -> diphosphate + phosphate + HydB
Description: Reaction transforming carbamoyl-P, HypE into diphosphate, phosphate , HydB
Type: state transition
Pathway Components: carbamoyl-P + HypE - HypF -> diphosphate + phosphate + HydB
Components:
Function Name Type Evidence Reference(s)
product HydB simple_molecule nd nd
reactant HypE simple_molecule nd nd
catalyzer HypF protein nd nd
reactant carbamoyl-P simple_molecule nd nd
product diphosphate simple_molecule nd nd
product phosphate simple_molecule nd nd
HypF carbamoyl-P O-carbamoyladenylate + diphosphate + phosphate
Name: carbamoyl-P -> O-carbamoyladenylate + diphosphate + phosphate
Description: Reaction transforming carbamoyl-P into O-carbamoyladenylate, diphosphate , phosphate
Type: state transition
Pathway Components: carbamoyl-P - HypF -> O-carbamoyladenylate + diphosphate + phosphate
Components:
Function Name Type Evidence Reference(s)
catalyzer HypF protein nd nd
product O-carbamoyladenylate simple_molecule nd nd
reactant carbamoyl-P simple_molecule nd nd
product diphosphate simple_molecule nd nd
product phosphate simple_molecule nd nd
HypF O-carbamoyladenylate + HypE HydB
Name: O-carbamoyladenylate + HypE -> HydB
Description: Reaction transforming O-carbamoyladenylate, HypE into HydB
Type: state transition
Pathway Components: O-carbamoyladenylate + HypE - HypF -> HydB
Components:
Function Name Type Evidence Reference(s)
product HydB simple_molecule nd nd
reactant HypE simple_molecule nd nd
catalyzer HypF protein nd nd
reactant O-carbamoyladenylate simple_molecule nd nd



RegulonDB