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ExuR Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
KDG altronate fructuronate galaturonate galaturonate_Ext GlcA GlcA_Ext mannonate tagaturonate ExuR ExuT UxaA UxaB UxaC UxuA UxuB UxuR exuR exuR_mRNA exuT exuT_mRNA uxaB uxaB_mRNA uxaCA uxaCA_mRNA uxuAB uxuAB_mRNA uxuR uxuR_mRNA


Gensor Unit       
Name: ExuR
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): GO:0045892 - negative regulation of transcription, DNA-templated
GO:0050662 - coenzyme binding
GO:0003700 - transcription factor activity, sequence-specific DNA binding
GO:0003824 - catalytic activity
GO:0019594 - mannitol metabolic process
GO:0016020 - membrane
GO:0016491 - oxidoreductase activity
GO:0051287 - NAD binding
GO:0005887 - integral component of plasma membrane
GO:0016829 - lyase activity
GO:0055085 - transmembrane transport
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Components:
Function Name Type
RNA uxuR_mRNA RNA


Reactions       
Showing 21 reactions
exuR exuR_mRNA
Name: exuR -> exuR_mRNA
Description: Transcription of transcription unit exuR; reaction inhibition by ExuR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant exuR gene nd nd
product exuR_mRNA RNA nd nd
exuT exuT_mRNA
Name: exuT -> exuT_mRNA
Description: Transcription of transcription unit exuT; reaction activation by DpiA-Pasp.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product exuT_mRNA RNA nd nd
reactant exuT gene nd nd
uxaB uxaB_mRNA
Name: uxaB -> uxaB_mRNA
Description: Transcription of transcription unit uxaB; reaction inhibition by ExuR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant uxaB gene nd nd
product uxaB_mRNA RNA nd nd
uxaCA uxaCA_mRNA
Name: uxaCA -> uxaCA_mRNA
Description: Transcription of transcription unit uxaCA; reaction inhibition by ExuR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant uxaCA gene nd nd
product uxaCA_mRNA RNA nd nd
uxuAB uxuAB_mRNA
Name: uxuAB -> uxuAB_mRNA
Description: Transcription of transcription unit uxuAB; reaction inhibition by ExuR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product uxuAB_mRNA RNA nd nd
reactant uxuAB gene nd nd
uxuR uxuR_mRNA
Name: uxuR -> uxuR_mRNA
Description: Transcription of transcription unit uxuR; reaction inhibition by ExuR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant uxuR gene nd nd
product uxuR_mRNA RNA nd nd
uxaCA_mRNA UxaC
Name: uxaCA_mRNA -> UxaC
Description: Translation of UxaC
Type: translation
Components:
Function Name Type Evidence Reference(s)
product UxaC protein nd nd
reactant uxaCA_mRNA RNA nd nd
galaturonate tagaturonate
Name: galaturonate -> tagaturonate
Description: Reaction transforming galaturonate into tagaturonate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant galaturonate simple molecule nd nd
product tagaturonate simple molecule nd nd
uxuAB_mRNA UxuA
Name: uxuAB_mRNA -> UxuA
Description: Translation of UxuA
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant uxuAB_mRNA RNA nd nd
product UxuA protein nd nd
mannonate KDG
Name: mannonate -> KDG
Description: Reaction transforming mannonate into KDG
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product KDG simple molecule nd nd
reactant mannonate simple molecule nd nd
exuT_mRNA ExuT
Name: exuT_mRNA -> ExuT
Description: Translation of ExuT
Type: translation
Components:
Function Name Type Evidence Reference(s)
product ExuT protein nd nd
reactant exuT_mRNA RNA nd nd
galaturonate_Ext galaturonate
Name: galaturonate_Ext -> galaturonate
Description: Transport of galaturonate_Ext through a bacterial membrane, leading to the presence of galaturonate inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product galaturonate simple molecule nd nd
reactant galaturonate_Ext simple molecule nd nd
GlcA_Ext GlcA
Name: GlcA_Ext -> GlcA
Description: Transport of GlcA_Ext through a bacterial membrane, leading to the presence of GlcA inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product GlcA simple molecule nd nd
reactant GlcA_Ext simple molecule nd nd
uxuAB_mRNA UxuB
Name: uxuAB_mRNA -> UxuB
Description: Translation of UxuB
Type: translation
Components:
Function Name Type Evidence Reference(s)
product UxuB protein nd nd
reactant uxuAB_mRNA RNA nd nd
mannonate fructuronate
Name: mannonate -> fructuronate
Description: Reaction transforming mannonate into fructuronate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant mannonate simple molecule nd nd
product fructuronate simple molecule nd nd
uxuR_mRNA UxuR
Name: uxuR_mRNA -> UxuR
Description: Translation of UxuR
Type: translation
Components:
Function Name Type Evidence Reference(s)
product UxuR protein nd nd
reactant uxuR_mRNA RNA nd nd
uxaCA_mRNA UxaA
Name: uxaCA_mRNA -> UxaA
Description: Translation of UxaA
Type: translation
Components:
Function Name Type Evidence Reference(s)
product UxaA protein nd nd
reactant uxaCA_mRNA RNA nd nd
altronate KDG
Name: altronate -> KDG
Description: Reaction transforming altronate into KDG
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant altronate simple molecule nd nd
product KDG simple molecule nd nd
exuR_mRNA ExuR
Name: exuR_mRNA -> ExuR
Description: Translation of ExuR
Type: translation
Components:
Function Name Type Evidence Reference(s)
product ExuR protein nd nd
reactant exuR_mRNA RNA nd nd
uxaB_mRNA UxaB
Name: uxaB_mRNA -> UxaB
Description: Translation of UxaB
Type: translation
Components:
Function Name Type Evidence Reference(s)
product UxaB protein nd nd
reactant uxaB_mRNA RNA nd nd
altronate tagaturonate
Name: altronate -> tagaturonate
Description: Reaction transforming altronate into tagaturonate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product tagaturonate simple molecule nd nd
reactant altronate simple molecule nd nd



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