RegulonDB RegulonDB

DeoR Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
2'-deoxy-alpha-D-ribose 1-phosphate 2'-deoxyadenosine 2'-deoxyadenosine_Ext 2'-deoxycytidine 2'-deoxycytidine_Ext 2'-deoxyguanosine 2'-deoxyinosine 2'-deoxyinosine_Ext 2'-deoxyuridine 2'-deoxyuridine_Ext 2-deoxy-D-ribose-5-phosphate D-glyceraldehyde 3-phosphate ribose-5P DeoA DeoB DeoC DeoD DeoR Deoxyribose-5-phosphate NupG Tsx nucleoside nucleoside_Ext purine base nebularine acetaldehyde adenine adenosine adenosine_Ext alpha-D-ribose-1-phosphate cytidine cytidine_Ext deoCABD deoCABD_mRNA guanine guanosine hypoxanthine inosine inosine_Ext nupG nupG_mRNA phosphate thymidine thymidine_Ext thymine tsx tsx_mRNA uracil uridine uridine_Ext xanthosine xanthosine_Ext DeoR Deoxyribose-5-phosphate phosphate guanine phosphate phosphate phosphate phosphate phosphate phosphate


Gensor Unit       
Name: DeoR
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): GO:0046930 - pore complex
GO:0003824 - catalytic activity
GO:0015212 - cytidine transmembrane transporter activity
GO:0015214 - pyrimidine nucleoside transmembrane transporter activity
GO:0016020 - membrane
GO:0009032 - thymidine phosphorylase activity
GO:0019686 - purine nucleoside interconversion
GO:0015213 - uridine transmembrane transporter activity
GO:0005737 - cytoplasm
GO:0005887 - integral component of plasma membrane
GO:0004139 - deoxyribose-phosphate aldolase activity
Read more >
Components:
Function Name Type
simple molecule xanthosine_Ext simple molecule


Reactions       
Showing 35 reactions
deoCABD deoCABD_mRNA
Name: deoCABD -> deoCABD_mRNA
Description: Transcription of transcription unit deoCABD; reaction inhibition by CytR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product deoCABD_mRNA RNA nd nd
reactant deoCABD gene nd nd
nupG nupG_mRNA
Name: nupG -> nupG_mRNA
Description: Transcription of transcription unit nupG; reaction inhibition by CytR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant nupG gene nd nd
product nupG_mRNA RNA nd nd
tsx tsx_mRNA
Name: tsx -> tsx_mRNA
Description: Transcription of transcription unit tsx; reaction inhibition by CytR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant tsx gene nd nd
product tsx_mRNA RNA nd nd
DeoR + Deoxyribose-5-phosphate DeoR-Deoxyribose-5-phosphate
Name: DeoR + Deoxyribose-5-phosphate -> DeoR-Deoxyribose-5-phosphate
Description: Reaction transforming DeoR, Deoxyribose-5-phosphate into DeoR-Deoxyribose-5-phosphate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant DeoR protein nd nd
product DeoR-Deoxyribose-5-phosphate complex nd nd
reactant Deoxyribose-5-phosphate simple molecule nd nd
deoCABD_mRNA DeoD
Name: deoCABD_mRNA -> DeoD
Description: Translation of DeoD
Type: translation
Components:
Function Name Type Evidence Reference(s)
product DeoD protein nd nd
reactant deoCABD_mRNA RNA nd nd
nebularine + phosphate purine base + alpha-D-ribose-1-phosphate
Name: nebularine + phosphate -> purine base + alpha-D-ribose-1-phosphate
Description: Reaction transforming nebularine, phosphate into purine base, alpha-D-ribose-1-phosphate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product purine base simple molecule nd nd
product alpha-D-ribose-1-phosphate simple molecule nd nd
reactant phosphate simple molecule nd nd
reactant nebularine simple molecule nd nd
guanosine + phosphate alpha-D-ribose-1-phosphate + guanine
Name: guanosine + phosphate -> alpha-D-ribose-1-phosphate + guanine
Description: Reaction transforming guanosine, phosphate into alpha-D-ribose-1-phosphate, guanine
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant phosphate simple molecule nd nd
reactant guanosine simple molecule nd nd
product guanine simple molecule nd nd
product alpha-D-ribose-1-phosphate simple molecule nd nd
deoxyguanosine + phosphate guanine + 2′-deoxy-alpha-D-ribose 1-phosphate
Name: deoxyguanosine + phosphate -> guanine + 2′-deoxy-alpha-D-ribose 1-phosphate
Description: Reaction transforming deoxyguanosine, phosphate into guanine, 2′-deoxy-alpha-D-ribose 1-phosphate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product guanine simple molecule nd nd
reactant deoxyguanosine simple molecule nd nd
product 2′-deoxy-alpha-D-ribose 1-phosphate simple molecule nd nd
reactant phosphate simple molecule nd nd
inosine + phosphate alpha-D-ribose-1-phosphate + hypoxanthine
Name: inosine + phosphate -> alpha-D-ribose-1-phosphate + hypoxanthine
Description: Reaction transforming inosine, phosphate into alpha-D-ribose-1-phosphate, hypoxanthine
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product alpha-D-ribose-1-phosphate simple molecule nd nd
product hypoxanthine simple molecule nd nd
reactant phosphate simple molecule nd nd
reactant inosine simple molecule nd nd
deoxyinosine + phosphate hypoxanthine + 2′-deoxy-alpha-D-ribose 1-phosphate
Name: deoxyinosine + phosphate -> hypoxanthine + 2′-deoxy-alpha-D-ribose 1-phosphate
Description: Reaction transforming deoxyinosine, phosphate into hypoxanthine, 2′-deoxy-alpha-D-ribose 1-phosphate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant phosphate simple molecule nd nd
product hypoxanthine simple molecule nd nd
reactant deoxyinosine simple molecule nd nd
product 2′-deoxy-alpha-D-ribose 1-phosphate simple molecule nd nd
adenosine + phosphate alpha-D-ribose-1-phosphate + adenine
Name: adenosine + phosphate -> alpha-D-ribose-1-phosphate + adenine
Description: Reaction transforming adenosine, phosphate into alpha-D-ribose-1-phosphate, adenine
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant phosphate simple molecule nd nd
reactant adenosine simple molecule nd nd
product alpha-D-ribose-1-phosphate simple molecule nd nd
product adenine simple molecule nd nd
deoxyadenosine + phosphate adenine + 2′-deoxy-alpha-D-ribose 1-phosphate
Name: deoxyadenosine + phosphate -> adenine + 2′-deoxy-alpha-D-ribose 1-phosphate
Description: Reaction transforming deoxyadenosine, phosphate into adenine, 2′-deoxy-alpha-D-ribose 1-phosphate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product 2′-deoxy-alpha-D-ribose 1-phosphate simple molecule nd nd
reactant phosphate simple molecule nd nd
product adenine simple molecule nd nd
reactant deoxyadenosine simple molecule nd nd
deoCABD_mRNA DeoB
Name: deoCABD_mRNA -> DeoB
Description: Translation of DeoB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant deoCABD_mRNA RNA nd nd
product DeoB protein nd nd
2′-deoxy-alpha-D-ribose 1-phosphate 2-deoxy-D-ribose-5-phosphate
Name: 2′-deoxy-alpha-D-ribose 1-phosphate -> 2-deoxy-D-ribose-5-phosphate
Description: Reaction transforming 2′-deoxy-alpha-D-ribose 1-phosphate into 2-deoxy-D-ribose-5-phosphate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant 2′-deoxy-alpha-D-ribose 1-phosphate simple molecule nd nd
product 2-deoxy-D-ribose-5-phosphate simple molecule nd nd
alpha-D-ribose-1-phosphate ribose-5P
Name: alpha-D-ribose-1-phosphate -> ribose-5P
Description: Reaction transforming alpha-D-ribose-1-phosphate into ribose-5P
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant alpha-D-ribose-1-phosphate simple molecule nd nd
product ribose-5P simple molecule nd nd
deoCABD_mRNA DeoC
Name: deoCABD_mRNA -> DeoC
Description: Translation of DeoC
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant deoCABD_mRNA RNA nd nd
product DeoC protein nd nd
2-deoxy-D-ribose-5-phosphate acetaldehyde + D-glyceraldehyde 3-phosphate
Name: 2-deoxy-D-ribose-5-phosphate -> acetaldehyde + D-glyceraldehyde 3-phosphate
Description: Reaction transforming 2-deoxy-D-ribose-5-phosphate into acetaldehyde, D-glyceraldehyde 3-phosphate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product D-glyceraldehyde 3-phosphate simple molecule nd nd
product acetaldehyde simple molecule nd nd
reactant 2-deoxy-D-ribose-5-phosphate simple molecule nd nd
nupG_mRNA NupG
Name: nupG_mRNA -> NupG
Description: Translation of NupG
Type: translation
Components:
Function Name Type Evidence Reference(s)
product NupG protein nd nd
reactant nupG_mRNA RNA nd nd
nucleoside_Ext nucleoside
Name: nucleoside_Ext -> nucleoside
Description: Transport of nucleoside_Ext through a bacterial membrane, leading to the presence of nucleoside inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant nucleoside_Ext simple molecule nd nd
product nucleoside simple molecule nd nd
cytidine_Ext cytidine
Name: cytidine_Ext -> cytidine
Description: Transport of cytidine_Ext through a bacterial membrane, leading to the presence of cytidine inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product cytidine simple molecule nd nd
reactant cytidine_Ext simple molecule nd nd
uridine_Ext uridine
Name: uridine_Ext -> uridine
Description: Transport of uridine_Ext through a bacterial membrane, leading to the presence of uridine inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product uridine simple molecule nd nd
reactant uridine_Ext simple molecule nd nd
thymidine_Ext thymidine
Name: thymidine_Ext -> thymidine
Description: Transport of thymidine_Ext through a bacterial membrane, leading to the presence of thymidine inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product thymidine simple molecule nd nd
reactant thymidine_Ext simple molecule nd nd
deoxyuridine_Ext deoxyuridine
Name: deoxyuridine_Ext -> deoxyuridine
Description: Transport of deoxyuridine_Ext through a bacterial membrane, leading to the presence of deoxyuridine inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant deoxyuridine_Ext simple molecule nd nd
product deoxyuridine simple molecule nd nd
d-cytidine_Ext d-cytidine
Name: d-cytidine_Ext -> d-cytidine
Description: Transport of d-cytidine_Ext through a bacterial membrane, leading to the presence of d-cytidine inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product d-cytidine simple molecule nd nd
reactant d-cytidine_Ext simple molecule nd nd
deoxyinosine_Ext deoxyinosine
Name: deoxyinosine_Ext -> deoxyinosine
Description: Transport of deoxyinosine_Ext through a bacterial membrane, leading to the presence of deoxyinosine inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product deoxyinosine simple molecule nd nd
reactant deoxyinosine_Ext simple molecule nd nd
deoxyadenosine_Ext deoxyadenosine
Name: deoxyadenosine_Ext -> deoxyadenosine
Description: Transport of deoxyadenosine_Ext through a bacterial membrane, leading to the presence of deoxyadenosine inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant deoxyadenosine_Ext simple molecule nd nd
product deoxyadenosine simple molecule nd nd
xanthosine_Ext xanthosine
Name: xanthosine_Ext -> xanthosine
Description: Transport of xanthosine_Ext through a bacterial membrane, leading to the presence of xanthosine inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product xanthosine simple molecule nd nd
reactant xanthosine_Ext simple molecule nd nd
inosine_Ext inosine
Name: inosine_Ext -> inosine
Description: Transport of inosine_Ext through a bacterial membrane, leading to the presence of inosine inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant inosine_Ext simple molecule nd nd
product inosine simple molecule nd nd
adenosine_Ext adenosine
Name: adenosine_Ext -> adenosine
Description: Transport of adenosine_Ext through a bacterial membrane, leading to the presence of adenosine inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product adenosine simple molecule nd nd
reactant adenosine_Ext simple molecule nd nd
tsx_mRNA Tsx
Name: tsx_mRNA -> Tsx
Description: Translation of Tsx
Type: translation
Components:
Function Name Type Evidence Reference(s)
product Tsx protein nd nd
reactant tsx_mRNA RNA nd nd
deoCABD_mRNA DeoA
Name: deoCABD_mRNA -> DeoA
Description: Translation of DeoA
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant deoCABD_mRNA RNA nd nd
product DeoA protein nd nd
thymidine + phosphate 2′-deoxy-alpha-D-ribose 1-phosphate + thymine
Name: thymidine + phosphate -> 2′-deoxy-alpha-D-ribose 1-phosphate + thymine
Description: Reaction transforming thymidine, phosphate into 2′-deoxy-alpha-D-ribose 1-phosphate, thymine
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant phosphate simple molecule nd nd
reactant thymidine simple molecule nd nd
product 2′-deoxy-alpha-D-ribose 1-phosphate simple molecule nd nd
product thymine simple molecule nd nd
deoxyuridine + phosphate 2′-deoxy-alpha-D-ribose 1-phosphate + uracil
Name: deoxyuridine + phosphate -> 2′-deoxy-alpha-D-ribose 1-phosphate + uracil
Description: Reaction transforming deoxyuridine, phosphate into 2′-deoxy-alpha-D-ribose 1-phosphate, uracil
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant phosphate simple molecule nd nd
product 2′-deoxy-alpha-D-ribose 1-phosphate simple molecule nd nd
reactant deoxyuridine simple molecule nd nd
product uracil simple molecule nd nd
deoxyadenosine deoxyinosine
Name: deoxyadenosine -> deoxyinosine
Description: Transformation of deoxyadenosine into deoxyinosine by one, or two/three reactions not shown.
Type: super-reaction
Components:
Function Name Type Evidence Reference(s)
reactant deoxyadenosine simple molecule nd nd
product deoxyinosine simple molecule nd nd
adenosine inosine
Name: adenosine -> inosine
Description: Transformation of adenosine into inosine by one, or two/three reactions not shown.
Type: super-reaction
Components:
Function Name Type Evidence Reference(s)
reactant adenosine simple molecule nd nd
product inosine simple molecule nd nd



RegulonDB