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DeoR Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
2'-deoxy-alpha-D-ribose 1-phosphate 2'-deoxyadenosine 2'-deoxyadenosine_Ext 2'-deoxycytidine 2'-deoxycytidine_Ext 2'-deoxyguanosine 2'-deoxyinosine 2'-deoxyinosine_Ext 2'-deoxyuridine 2'-deoxyuridine_Ext 2-deoxy-D-ribose-5-phosphate D-glyceraldehyde 3-phosphate ribose-5P DeoA DeoB DeoC DeoD DeoR Deoxyribose-5-phosphate NupG Tsx nucleoside nucleoside_Ext purine base nebularine acetaldehyde adenine adenosine adenosine_Ext alpha-D-ribose-1-phosphate cytidine cytidine_Ext deoCABD deoCABD_mRNA guanine guanosine hypoxanthine inosine inosine_Ext nupG nupG_mRNA phosphate thymidine thymidine_Ext thymine tsx tsx_mRNA uracil uridine uridine_Ext xanthosine xanthosine_Ext DeoR Deoxyribose-5-phosphate phosphate guanine phosphate phosphate phosphate phosphate phosphate phosphate


Gensor Unit       
Name: DeoR
Description: Molecular biology level
Detailed: In the absence of deoxyadenosine, DeoR negatively regulates the expression of genes required for nucleoside transport and metabolic process and deoxyribonucleotide catabolic process. Under these conditions, DeoR remains unmodified, binds its target sites preventing the expression of its regulated genes. In the presence of deoxyadenosine, DeoR is modified to DeoR-Deoxyribose-5-phosphate, unbinds its target sites enabling the expression of its regulated genes.
Less detailed: In the absence of deoxyadenosine, DeoR negatively regulates the expression of genes needed for nucleoside transport and metabolic process and deoxyribonucleotide catabolic process.

Physiology level
Detailed: The presence of deoxyadenosine induces the expression of genes involved with nucleoside transport and metabolic process and deoxyribonucleotide catabolic process. Under these conditions, the genes necessary for nucleoside transport into cell and conversion to nucleobases, and conversion of deoxyadenosine to deoxyribose-5-phosphate are expressed.
Less detailed: The presence of deoxyadenosine induces the expression of genes needful for nucleoside transport into cell and conversion to nucleobases, and conversion of deoxyadenosine to deoxyribose-5-phosphate.
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): biological_process GO:0032238 - adenosine transport
GO:0016052 - carbohydrate catabolic process
GO:0006974 - cellular response to DNA damage stimulus
GO:0015861 - cytidine transport
GO:0009264 - deoxyribonucleotide catabolic process
GO:0015949 - nucleobase-containing small molecule interconversion
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cellular_component GO:0009279 - cell outer membrane
GO:0005829 - cytosol
GO:0005887 - integral component of plasma membrane
GO:0016020 - membrane
GO:0005886 - plasma membrane
GO:0046930 - pore complex
molecular_function GO:0015212 - cytidine transmembrane transporter activity
GO:0004139 - deoxyribose-phosphate aldolase activity
GO:0042802 - identical protein binding
GO:0016829 - lyase activity
GO:0015471 - nucleoside-specific channel forming porin activity
GO:0008973 - phosphopentomutase activity
GO:0004645 - phosphorylase activity
Read more >
Components: Show/Hide Components Table (62 more...)
Function Name Type
simple_molecule 2-deoxy-D-ribose 5-phosphate simple_molecule
simple_molecule DNA containing an apurinic site simple_molecule
simple_molecule DNA with G-A mismatch simple_molecule
protein DeoA protein
protein DeoB protein
protein DeoC protein
protein DeoD protein
protein DeoR protein
complex DeoR-2-deoxy-D-ribose 5-phosphate complex
simple_molecule GlcNAc-1,6-anhydro-MurNAc-pentapeptide simple_molecule
protein MltC protein
protein MutY protein
protein NupG protein
protein Tsx protein
protein YggX protein
simple_molecule adenine simple_molecule
simple_molecule adenosine simple_molecule
simple_molecule adenosine_Ext simple_molecule
simple_molecule cytidine simple_molecule
simple_molecule cytidine_Ext simple_molecule
simple_molecule d-cytidine simple_molecule
simple_molecule d-cytidine_Ext simple_molecule
gene deoCABD gene
RNA deoCABD_mRNA RNA
simple_molecule deoxy-D-ribose 1-phosphate simple_molecule
simple_molecule deoxyadenosine simple_molecule
simple_molecule deoxyadenosine_Ext simple_molecule
simple_molecule deoxyguanosine simple_molecule
simple_molecule deoxyinosine simple_molecule
simple_molecule deoxyinosine_Ext simple_molecule
simple_molecule deoxyuridine simple_molecule
simple_molecule deoxyuridine_Ext simple_molecule
simple_molecule ethanal simple_molecule
simple_molecule glyceraldehyde-P simple_molecule
simple_molecule guanine simple_molecule
simple_molecule guanosine simple_molecule
simple_molecule hypoxanthine simple_molecule
simple_molecule inosine simple_molecule
simple_molecule inosine_Ext simple_molecule
simple_molecule lipid II simple_molecule
gene mutY-yggX-mltC-nupG gene
RNA mutY-yggX-mltC-nupG_mRNA RNA
simple_molecule nebularine simple_molecule
simple_molecule nucleoside simple_molecule
simple_molecule nucleoside_Ext simple_molecule
gene nupG gene
RNA nupG_mRNA RNA
simple_molecule peptidoglycan dimer (generic) simple_molecule
simple_molecule phosphate simple_molecule
simple_molecule purine base simple_molecule
simple_molecule ribose-1-phosphate simple_molecule
simple_molecule ribose-5P simple_molecule
simple_molecule thymidine simple_molecule
simple_molecule thymidine_Ext simple_molecule
simple_molecule thymine simple_molecule
gene tsx gene
RNA tsx_mRNA RNA
simple_molecule uracil simple_molecule
simple_molecule uridine simple_molecule
simple_molecule uridine_Ext simple_molecule
simple_molecule xanthosine simple_molecule
simple_molecule xanthosine_Ext simple_molecule


Reactions       
Showing 42 reactions
DeoR deoCABD deoCABD_mRNA
Name: deoCABD -> deoCABD_mRNA
Description: Transcription of transcription unit deoCABD. Reaction inhibition by DeoR.
Type: transcription
Pathway Components: deoCABD - DeoR -> deoCABD_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor DeoR protein nd nd
reactant deoCABD gene nd nd
product deoCABD_mRNA RNA nd nd
DeoR mutY-yggX-mltC-nupG mutY-yggX-mltC-nupG_mRNA
Name: mutY-yggX-mltC-nupG -> mutY-yggX-mltC-nupG_mRNA
Description: Transcription of transcription unit mutY-yggX-mltC-nupG. Reaction inhibition by DeoR.
Type: transcription
Pathway Components: mutY-yggX-mltC-nupG - DeoR -> mutY-yggX-mltC-nupG_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor DeoR protein nd nd
reactant mutY-yggX-mltC-nupG gene nd nd
product mutY-yggX-mltC-nupG_mRNA RNA nd nd
DeoR tsx tsx_mRNA
Name: tsx -> tsx_mRNA
Description: Transcription of transcription unit tsx. Reaction inhibition by DeoR.
Type: transcription
Pathway Components: tsx - DeoR -> tsx_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor DeoR protein nd nd
reactant tsx gene nd nd
product tsx_mRNA RNA nd nd
2-deoxy-D-ribose 5-phosphate + DeoR DeoR-2-deoxy-D-ribose 5-phosphate
Name: 2-deoxy-D-ribose 5-phosphate + DeoR -> DeoR-2-deoxy-D-ribose 5-phosphate
Description: Reaction transforming 2-deoxy-D-ribose 5-phosphate, DeoR into DeoR-2-deoxy-D-ribose 5-phosphate
Type: state transition
Pathway Components: 2-deoxy-D-ribose 5-phosphate + DeoR -> DeoR-2-deoxy-D-ribose 5-phosphate
Components:
Function Name Type Evidence Reference(s)
reactant 2-deoxy-D-ribose 5-phosphate simple_molecule nd nd
reactant DeoR protein nd nd
product DeoR-2-deoxy-D-ribose 5-phosphate complex nd nd
DeoR nupG nupG_mRNA
Name: nupG -> nupG_mRNA
Description: Transcription of transcription unit nupG. Reaction inhibition by DeoR.
Type: transcription
Pathway Components: nupG - DeoR -> nupG_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor DeoR protein nd nd
reactant nupG gene nd nd
product nupG_mRNA RNA nd nd
deoCABD_mRNA DeoC
Name: deoCABD_mRNA -> DeoC
Description: Translation of DeoC
Type: translation
Pathway Components: deoCABD_mRNA -> DeoC
Components:
Function Name Type Evidence Reference(s)
product DeoC protein nd nd
reactant deoCABD_mRNA RNA nd nd
DeoC 2-deoxy-D-ribose 5-phosphate glyceraldehyde-P + ethanal
Name: 2-deoxy-D-ribose 5-phosphate -> glyceraldehyde-P + ethanal
Description: Reaction transforming 2-deoxy-D-ribose 5-phosphate into glyceraldehyde-P, ethanal
Type: state transition
Pathway Components: 2-deoxy-D-ribose 5-phosphate - DeoC -> glyceraldehyde-P + ethanal
Components:
Function Name Type Evidence Reference(s)
reactant 2-deoxy-D-ribose 5-phosphate simple_molecule nd nd
catalyzer DeoC protein nd nd
product ethanal simple_molecule nd nd
product glyceraldehyde-P simple_molecule nd nd
deoCABD_mRNA DeoA
Name: deoCABD_mRNA -> DeoA
Description: Translation of DeoA
Type: translation
Pathway Components: deoCABD_mRNA -> DeoA
Components:
Function Name Type Evidence Reference(s)
product DeoA protein nd nd
reactant deoCABD_mRNA RNA nd nd
DeoA deoxy-D-ribose 1-phosphate ribose-1-phosphate thymine phosphate + thymidine deoxy-D-ribose 1-phosphate + thymine
Name: phosphate + thymidine -> deoxy-D-ribose 1-phosphate + thymine
Description: Reaction transforming phosphate, thymidine into deoxy-D-ribose 1-phosphate, thymine
Type: state transition
Pathway Components: phosphate + thymidine - DeoA - deoxy-D-ribose 1-phosphate - ribose-1-phosphate - thymine -> deoxy-D-ribose 1-phosphate + thymine
Components:
Function Name Type Evidence Reference(s)
catalyzer DeoA protein nd nd
inhibitor deoxy-D-ribose 1-phosphate simple_molecule nd nd
product deoxy-D-ribose 1-phosphate simple_molecule nd nd
reactant phosphate simple_molecule nd nd
inhibitor ribose-1-phosphate simple_molecule nd nd
reactant thymidine simple_molecule nd nd
inhibitor thymine simple_molecule nd nd
product thymine simple_molecule nd nd
DeoA deoxyuridine + phosphate deoxy-D-ribose 1-phosphate + uracil
Name: deoxyuridine + phosphate -> deoxy-D-ribose 1-phosphate + uracil
Description: Reaction transforming deoxyuridine, phosphate into deoxy-D-ribose 1-phosphate, uracil
Type: state transition
Pathway Components: deoxyuridine + phosphate - DeoA -> deoxy-D-ribose 1-phosphate + uracil
Components:
Function Name Type Evidence Reference(s)
catalyzer DeoA protein nd nd
product deoxy-D-ribose 1-phosphate simple_molecule nd nd
reactant deoxyuridine simple_molecule nd nd
reactant phosphate simple_molecule nd nd
product uracil simple_molecule nd nd
deoCABD_mRNA DeoB
Name: deoCABD_mRNA -> DeoB
Description: Translation of DeoB
Type: translation
Pathway Components: deoCABD_mRNA -> DeoB
Components:
Function Name Type Evidence Reference(s)
product DeoB protein nd nd
reactant deoCABD_mRNA RNA nd nd
DeoB deoxy-D-ribose 1-phosphate 2-deoxy-D-ribose 5-phosphate
Name: deoxy-D-ribose 1-phosphate -> 2-deoxy-D-ribose 5-phosphate
Description: Reaction transforming deoxy-D-ribose 1-phosphate into 2-deoxy-D-ribose 5-phosphate
Type: state transition
Pathway Components: deoxy-D-ribose 1-phosphate - DeoB -> 2-deoxy-D-ribose 5-phosphate
Components:
Function Name Type Evidence Reference(s)
product 2-deoxy-D-ribose 5-phosphate simple_molecule nd nd
catalyzer DeoB protein nd nd
reactant deoxy-D-ribose 1-phosphate simple_molecule nd nd
DeoB ribose-1-phosphate ribose-5P
Name: ribose-1-phosphate -> ribose-5P
Description: Reaction transforming ribose-1-phosphate into ribose-5P
Type: state transition
Pathway Components: ribose-1-phosphate - DeoB -> ribose-5P
Components:
Function Name Type Evidence Reference(s)
catalyzer DeoB protein nd nd
reactant ribose-1-phosphate simple_molecule nd nd
product ribose-5P simple_molecule nd nd
deoCABD_mRNA DeoD
Name: deoCABD_mRNA -> DeoD
Description: Translation of DeoD
Type: translation
Pathway Components: deoCABD_mRNA -> DeoD
Components:
Function Name Type Evidence Reference(s)
product DeoD protein nd nd
reactant deoCABD_mRNA RNA nd nd
DeoD nebularine + phosphate ribose-1-phosphate + purine base
Name: nebularine + phosphate -> ribose-1-phosphate + purine base
Description: Reaction transforming nebularine, phosphate into ribose-1-phosphate, purine base
Type: state transition
Pathway Components: nebularine + phosphate - DeoD -> ribose-1-phosphate + purine base
Components:
Function Name Type Evidence Reference(s)
catalyzer DeoD protein nd nd
reactant nebularine simple_molecule nd nd
reactant phosphate simple_molecule nd nd
product purine base simple_molecule nd nd
product ribose-1-phosphate simple_molecule nd nd
DeoD phosphate + guanosine ribose-1-phosphate + guanine
Name: phosphate + guanosine -> ribose-1-phosphate + guanine
Description: Reaction transforming phosphate, guanosine into ribose-1-phosphate, guanine
Type: state transition
Pathway Components: phosphate + guanosine - DeoD -> ribose-1-phosphate + guanine
Components:
Function Name Type Evidence Reference(s)
catalyzer DeoD protein nd nd
product guanine simple_molecule nd nd
reactant guanosine simple_molecule nd nd
reactant phosphate simple_molecule nd nd
product ribose-1-phosphate simple_molecule nd nd
DeoD adenosine deoxyguanosine + phosphate deoxy-D-ribose 1-phosphate + guanine
Name: deoxyguanosine + phosphate -> deoxy-D-ribose 1-phosphate + guanine
Description: Reaction transforming deoxyguanosine, phosphate into deoxy-D-ribose 1-phosphate, guanine
Type: state transition
Pathway Components: deoxyguanosine + phosphate - DeoD - adenosine -> deoxy-D-ribose 1-phosphate + guanine
Components:
Function Name Type Evidence Reference(s)
catalyzer DeoD protein nd nd
inhibitor adenosine simple_molecule nd nd
product deoxy-D-ribose 1-phosphate simple_molecule nd nd
reactant deoxyguanosine simple_molecule nd nd
product guanine simple_molecule nd nd
reactant phosphate simple_molecule nd nd
DeoD phosphate + inosine ribose-1-phosphate + hypoxanthine
Name: phosphate + inosine -> ribose-1-phosphate + hypoxanthine
Description: Reaction transforming phosphate, inosine into ribose-1-phosphate, hypoxanthine
Type: state transition
Pathway Components: phosphate + inosine - DeoD -> ribose-1-phosphate + hypoxanthine
Components:
Function Name Type Evidence Reference(s)
catalyzer DeoD protein nd nd
product hypoxanthine simple_molecule nd nd
reactant inosine simple_molecule nd nd
reactant phosphate simple_molecule nd nd
product ribose-1-phosphate simple_molecule nd nd
DeoD deoxyinosine + phosphate deoxy-D-ribose 1-phosphate + hypoxanthine
Name: deoxyinosine + phosphate -> deoxy-D-ribose 1-phosphate + hypoxanthine
Description: Reaction transforming deoxyinosine, phosphate into deoxy-D-ribose 1-phosphate, hypoxanthine
Type: state transition
Pathway Components: deoxyinosine + phosphate - DeoD -> deoxy-D-ribose 1-phosphate + hypoxanthine
Components:
Function Name Type Evidence Reference(s)
catalyzer DeoD protein nd nd
product deoxy-D-ribose 1-phosphate simple_molecule nd nd
reactant deoxyinosine simple_molecule nd nd
product hypoxanthine simple_molecule nd nd
reactant phosphate simple_molecule nd nd
DeoD phosphate + adenosine ribose-1-phosphate + adenine
Name: phosphate + adenosine -> ribose-1-phosphate + adenine
Description: Reaction transforming phosphate, adenosine into ribose-1-phosphate, adenine
Type: state transition
Pathway Components: phosphate + adenosine - DeoD -> ribose-1-phosphate + adenine
Components:
Function Name Type Evidence Reference(s)
catalyzer DeoD protein nd nd
product adenine simple_molecule nd nd
reactant adenosine simple_molecule nd nd
reactant phosphate simple_molecule nd nd
product ribose-1-phosphate simple_molecule nd nd
DeoD deoxyadenosine + phosphate deoxy-D-ribose 1-phosphate + adenine
Name: deoxyadenosine + phosphate -> deoxy-D-ribose 1-phosphate + adenine
Description: Reaction transforming deoxyadenosine, phosphate into deoxy-D-ribose 1-phosphate, adenine
Type: state transition
Pathway Components: deoxyadenosine + phosphate - DeoD -> deoxy-D-ribose 1-phosphate + adenine
Components:
Function Name Type Evidence Reference(s)
catalyzer DeoD protein nd nd
product adenine simple_molecule nd nd
product deoxy-D-ribose 1-phosphate simple_molecule nd nd
reactant deoxyadenosine simple_molecule nd nd
reactant phosphate simple_molecule nd nd
mutY-yggX-mltC-nupG_mRNA MutY
Name: mutY-yggX-mltC-nupG_mRNA -> MutY
Description: Translation of MutY
Type: translation
Pathway Components: mutY-yggX-mltC-nupG_mRNA -> MutY
Components:
Function Name Type Evidence Reference(s)
product MutY protein nd nd
reactant mutY-yggX-mltC-nupG_mRNA RNA nd nd
MutY DNA with G-A mismatch DNA containing an apurinic site
Name: DNA with G-A mismatch -> DNA containing an apurinic site
Description: Reaction transforming DNA with G-A mismatch into DNA containing an apurinic site
Type: state transition
Pathway Components: DNA with G-A mismatch - MutY -> DNA containing an apurinic site
Components:
Function Name Type Evidence Reference(s)
product DNA containing an apurinic site simple_molecule nd nd
reactant DNA with G-A mismatch simple_molecule nd nd
catalyzer MutY protein nd nd
mutY-yggX-mltC-nupG_mRNA YggX
Name: mutY-yggX-mltC-nupG_mRNA -> YggX
Description: Translation of YggX
Type: translation
Pathway Components: mutY-yggX-mltC-nupG_mRNA -> YggX
Components:
Function Name Type Evidence Reference(s)
product YggX protein nd nd
reactant mutY-yggX-mltC-nupG_mRNA RNA nd nd
mutY-yggX-mltC-nupG_mRNA MltC
Name: mutY-yggX-mltC-nupG_mRNA -> MltC
Description: Translation of MltC
Type: translation
Pathway Components: mutY-yggX-mltC-nupG_mRNA -> MltC
Components:
Function Name Type Evidence Reference(s)
product MltC protein nd nd
reactant mutY-yggX-mltC-nupG_mRNA RNA nd nd
MltC peptidoglycan dimer (generic) GlcNAc-1,6-anhydro-MurNAc-pentapeptide + lipid II
Name: peptidoglycan dimer (generic) -> GlcNAc-1,6-anhydro-MurNAc-pentapeptide + lipid II
Description: Reaction transforming peptidoglycan dimer (generic) into GlcNAc-1,6-anhydro-MurNAc-pentapeptide, lipid II
Type: state transition
Pathway Components: peptidoglycan dimer (generic) - MltC -> GlcNAc-1,6-anhydro-MurNAc-pentapeptide + lipid II
Components:
Function Name Type Evidence Reference(s)
product GlcNAc-1,6-anhydro-MurNAc-pentapeptide simple_molecule nd nd
catalyzer MltC protein nd nd
product lipid II simple_molecule nd nd
reactant peptidoglycan dimer (generic) simple_molecule nd nd
mutY-yggX-mltC-nupG_mRNA NupG
Name: mutY-yggX-mltC-nupG_mRNA -> NupG
Description: Translation of NupG
Type: translation
Pathway Components: mutY-yggX-mltC-nupG_mRNA -> NupG
Components:
Function Name Type Evidence Reference(s)
product NupG protein nd nd
reactant mutY-yggX-mltC-nupG_mRNA RNA nd nd
NupG Tsx nucleoside_Ext nucleoside
Name: nucleoside_Ext -> nucleoside
Description: Transport of nucleoside_Ext through a bacterial membrane, leading to the presence of nucleoside inside the cell.
Type: transport
Pathway Components: nucleoside_Ext - NupG - Tsx -> nucleoside
Components:
Function Name Type Evidence Reference(s)
catalyzer NupG protein nd nd
catalyzer Tsx protein nd nd
product nucleoside simple_molecule nd nd
reactant nucleoside_Ext simple_molecule nd nd
NupG uridine_Ext uridine
Name: uridine_Ext -> uridine
Description: Transport of uridine_Ext through a bacterial membrane, leading to the presence of uridine inside the cell.
Type: transport
Pathway Components: uridine_Ext - NupG -> uridine
Components:
Function Name Type Evidence Reference(s)
catalyzer NupG protein nd nd
product uridine simple_molecule nd nd
reactant uridine_Ext simple_molecule nd nd
NupG thymidine_Ext thymidine
Name: thymidine_Ext -> thymidine
Description: Transport of thymidine_Ext through a bacterial membrane, leading to the presence of thymidine inside the cell.
Type: transport
Pathway Components: thymidine_Ext - NupG -> thymidine
Components:
Function Name Type Evidence Reference(s)
catalyzer NupG protein nd nd
product thymidine simple_molecule nd nd
reactant thymidine_Ext simple_molecule nd nd
NupG inosine_Ext inosine
Name: inosine_Ext -> inosine
Description: Transport of inosine_Ext through a bacterial membrane, leading to the presence of inosine inside the cell.
Type: transport
Pathway Components: inosine_Ext - NupG -> inosine
Components:
Function Name Type Evidence Reference(s)
catalyzer NupG protein nd nd
product inosine simple_molecule nd nd
reactant inosine_Ext simple_molecule nd nd
NupG deoxyuridine_Ext deoxyuridine
Name: deoxyuridine_Ext -> deoxyuridine
Description: Transport of deoxyuridine_Ext through a bacterial membrane, leading to the presence of deoxyuridine inside the cell.
Type: transport
Pathway Components: deoxyuridine_Ext - NupG -> deoxyuridine
Components:
Function Name Type Evidence Reference(s)
catalyzer NupG protein nd nd
product deoxyuridine simple_molecule nd nd
reactant deoxyuridine_Ext simple_molecule nd nd
NupG deoxyinosine_Ext deoxyinosine
Name: deoxyinosine_Ext -> deoxyinosine
Description: Transport of deoxyinosine_Ext through a bacterial membrane, leading to the presence of deoxyinosine inside the cell.
Type: transport
Pathway Components: deoxyinosine_Ext - NupG -> deoxyinosine
Components:
Function Name Type Evidence Reference(s)
catalyzer NupG protein nd nd
product deoxyinosine simple_molecule nd nd
reactant deoxyinosine_Ext simple_molecule nd nd
NupG d-cytidine_Ext d-cytidine
Name: d-cytidine_Ext -> d-cytidine
Description: Transport of d-cytidine_Ext through a bacterial membrane, leading to the presence of d-cytidine inside the cell.
Type: transport
Pathway Components: d-cytidine_Ext - NupG -> d-cytidine
Components:
Function Name Type Evidence Reference(s)
catalyzer NupG protein nd nd
product d-cytidine simple_molecule nd nd
reactant d-cytidine_Ext simple_molecule nd nd
NupG deoxyadenosine_Ext deoxyadenosine
Name: deoxyadenosine_Ext -> deoxyadenosine
Description: Transport of deoxyadenosine_Ext through a bacterial membrane, leading to the presence of deoxyadenosine inside the cell.
Type: transport
Pathway Components: deoxyadenosine_Ext - NupG -> deoxyadenosine
Components:
Function Name Type Evidence Reference(s)
catalyzer NupG protein nd nd
product deoxyadenosine simple_molecule nd nd
reactant deoxyadenosine_Ext simple_molecule nd nd
NupG cytidine_Ext cytidine
Name: cytidine_Ext -> cytidine
Description: Transport of cytidine_Ext through a bacterial membrane, leading to the presence of cytidine inside the cell.
Type: transport
Pathway Components: cytidine_Ext - NupG -> cytidine
Components:
Function Name Type Evidence Reference(s)
catalyzer NupG protein nd nd
product cytidine simple_molecule nd nd
reactant cytidine_Ext simple_molecule nd nd
NupG adenosine_Ext adenosine
Name: adenosine_Ext -> adenosine
Description: Transport of adenosine_Ext through a bacterial membrane, leading to the presence of adenosine inside the cell.
Type: transport
Pathway Components: adenosine_Ext - NupG -> adenosine
Components:
Function Name Type Evidence Reference(s)
catalyzer NupG protein nd nd
product adenosine simple_molecule nd nd
reactant adenosine_Ext simple_molecule nd nd
NupG xanthosine_Ext xanthosine
Name: xanthosine_Ext -> xanthosine
Description: Transport of xanthosine_Ext through a bacterial membrane, leading to the presence of xanthosine inside the cell.
Type: transport
Pathway Components: xanthosine_Ext - NupG -> xanthosine
Components:
Function Name Type Evidence Reference(s)
catalyzer NupG protein nd nd
product xanthosine simple_molecule nd nd
reactant xanthosine_Ext simple_molecule nd nd
tsx_mRNA Tsx
Name: tsx_mRNA -> Tsx
Description: Translation of Tsx
Type: translation
Pathway Components: tsx_mRNA -> Tsx
Components:
Function Name Type Evidence Reference(s)
product Tsx protein nd nd
reactant tsx_mRNA RNA nd nd
nupG_mRNA NupG
Name: nupG_mRNA -> NupG
Description: Translation of NupG
Type: translation
Pathway Components: nupG_mRNA -> NupG
Components:
Function Name Type Evidence Reference(s)
product NupG protein nd nd
reactant nupG_mRNA RNA nd nd
xanthosine ribose-1-phosphate
Name: xanthosine -> ribose-1-phosphate
Description: Transformation of xanthosine into ribose-1-phosphate by one or more reactions not shown.
Type: complementary pathway reaction
Pathway Components: xanthosine / XANTHOSINEPHOSPHORY-RXN / ribose-1-phosphate
Components:
Function Name Type Evidence Reference(s)
product ribose-1-phosphate simple_molecule nd nd
reactant xanthosine simple_molecule nd nd
adenosine inosine
Name: adenosine -> inosine
Description: Transformation of adenosine into inosine by one or more reactions not shown.
Type: complementary pathway reaction
Pathway Components: adenosine / ADENODEAMIN-RXN / inosine
Components:
Function Name Type Evidence Reference(s)
reactant adenosine simple_molecule nd nd
product inosine simple_molecule nd nd



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