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CysB Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
butanesulfonate ketoglutarate CO2 Cbl CysA CysB CysC CysD CysH CysI CysJ CysK CysM CysN CysP CysU CysW FMN Reduced FMN HslJ L-cysteine acetylserine Sbp SsuA SsuB SsuC SsuD SsuE Sulphide TauA TauB TauC TauD thiosulfate a reduced thioredoxin acetate adenosine 3',5'-bisphosphate adenosine 5'-phosphosulfate aminoacetaldehyde ammonia RCHO an aliphatic sulfonate an aliphatic sulfonate_Ext alkanesulfonate oxidized thioredoxin butanal cbl cbl_mRNA cysB cysB_mRNA cysDNC cysDNC_mRNA cysJIH cysJIH_mRNA cysK cysK_mRNA cysPUWAM cysPUWAM_mRNA PP glycoaldehyde hslJ hslJ_mRNA sulfide isethionate oxygen phosphate phosphoadenosine-5'-phosphosulfate pyruvate reduced riboflavin riboflavin selenate selenate_Ext selenite selenite_Ext ssuEADCB ssuEADCB_mRNA succinate H2SO4 H2SO4_Ext sulfite tauABCD tauABCD_mRNA taufon taufon_Ext thiosulfate thiosulfate_Ext CysB acetylserine CysB thiosulfate CysB Sulphide CysN CysD SsuA SsuC SsuB TauA TauC TauB CysA CysW CysU CysP Sbp CysW CysU CysA CysJ CysI phosphate phosphate oxygen sulfite sulfite oxygen Reduced FMN FMN sulfite sulfite


Gensor Unit       
Name: CysB
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): GO:0051213 - dioxygenase activity
GO:0043190 - ATP-binding cassette (ABC) transporter complex
GO:0019344 - cysteine biosynthetic process
GO:0003700 - transcription factor activity, sequence-specific DNA binding
GO:0003824 - catalytic activity
GO:0004124 - cysteine synthase activity
GO:0015411 - taurine-transporting ATPase activity
GO:0008652 - cellular amino acid biosynthetic process
GO:0010181 - FMN binding
GO:0010438 - cellular response to sulfur starvation
GO:0016020 - membrane
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Components:
Function Name Type
simple molecule thiosulfate_Ext simple molecule


Reactions       
Showing 60 reactions
CysB + acetylserine CysB-acetylserine
Name: CysB + acetylserine -> CysB-acetylserine
Description: Reaction transforming CysB, acetylserine into CysB-acetylserine
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product CysB-acetylserine complex nd nd
reactant acetylserine simple molecule nd nd
reactant CysB protein nd nd
cbl cbl_mRNA
Name: cbl -> cbl_mRNA
Description: Transcription of transcription unit cbl; reaction activation by CysB-acetylserine.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant cbl gene nd nd
product cbl_mRNA RNA nd nd
cysB cysB_mRNA
Name: cysB -> cysB_mRNA
Description: Transcription of transcription unit cysB; reaction inhibition by CysB-acetylserine.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product cysB_mRNA RNA nd nd
reactant cysB gene nd nd
cysDNC cysDNC_mRNA
Name: cysDNC -> cysDNC_mRNA
Description: Transcription of transcription unit cysDNC; reaction activation by CysB-acetylserine.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant cysDNC gene nd nd
product cysDNC_mRNA RNA nd nd
cysJIH cysJIH_mRNA
Name: cysJIH -> cysJIH_mRNA
Description: Transcription of transcription unit cysJIH; reaction activation by CysB-acetylserine.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product cysJIH_mRNA RNA nd nd
reactant cysJIH gene nd nd
cysK cysK_mRNA
Name: cysK -> cysK_mRNA
Description: Transcription of transcription unit cysK; reaction activation by CysB-acetylserine.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product cysK_mRNA RNA nd nd
reactant cysK gene nd nd
cysPUWAM cysPUWAM_mRNA
Name: cysPUWAM -> cysPUWAM_mRNA
Description: Transcription of transcription unit cysPUWAM; reaction activation by CysB-acetylserine.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant cysPUWAM gene nd nd
product cysPUWAM_mRNA RNA nd nd
hslJ hslJ_mRNA
Name: hslJ -> hslJ_mRNA
Description: Transcription of transcription unit hslJ; reaction inhibition by CysB-acetylserine.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant hslJ gene nd nd
product hslJ_mRNA RNA nd nd
ssuEADCB ssuEADCB_mRNA
Name: ssuEADCB -> ssuEADCB_mRNA
Description: Transcription of transcription unit ssuEADCB; reaction activation by Cbl.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product ssuEADCB_mRNA RNA nd nd
reactant ssuEADCB gene nd nd
tauABCD tauABCD_mRNA
Name: tauABCD -> tauABCD_mRNA
Description: Transcription of transcription unit tauABCD; reaction activation by Cbl.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant tauABCD gene nd nd
product tauABCD_mRNA RNA nd nd
CysB + thiosulfate CysB-thiosulfate
Name: CysB + thiosulfate -> CysB-thiosulfate
Description: Reaction transforming CysB, thiosulfate into CysB-thiosulfate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant CysB protein nd nd
reactant thiosulfate simple molecule nd nd
product CysB-thiosulfate complex nd nd
CysB + Sulphide CysB-Sulphide
Name: CysB + Sulphide -> CysB-Sulphide
Description: Reaction transforming CysB, Sulphide into CysB-Sulphide
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant Sulphide simple molecule nd nd
reactant CysB protein nd nd
product CysB-Sulphide complex nd nd
cysJIH_mRNA CysH
Name: cysJIH_mRNA -> CysH
Description: Translation of CysH
Type: translation
Components:
Function Name Type Evidence Reference(s)
product CysH protein nd nd
reactant cysJIH_mRNA RNA nd nd
PAP + sulfite + oxidized thioredoxin PAPS + reduced thioredoxin
Name: PAP + sulfite + oxidized thioredoxin -> PAPS + reduced thioredoxin
Description: Reaction transforming PAP, sulfite, oxidized thioredoxin into PAPS, reduced thioredoxin
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product reduced thioredoxin simple molecule nd nd
reactant oxidized thioredoxin simple molecule nd nd
product PAPS simple molecule nd nd
reactant sulfite simple molecule nd nd
reactant PAP simple molecule nd nd
hslJ_mRNA HslJ
Name: hslJ_mRNA -> HslJ
Description: Translation of HslJ
Type: translation
Components:
Function Name Type Evidence Reference(s)
product HslJ protein nd nd
reactant hslJ_mRNA RNA nd nd
cysDNC_mRNA CysN
Name: cysDNC_mRNA -> CysN
Description: Translation of CysN
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant cysDNC_mRNA RNA nd nd
product CysN protein nd nd
CysN + CysD CysN-CysD
Name: CysN + CysD -> CysN-CysD
Description: Reaction transforming CysN, CysD into CysN-CysD
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant CysD protein nd nd
reactant CysN protein nd nd
product CysN-CysD complex nd nd
H2SO4 APS + PP
Name: H2SO4 -> APS + PP
Description: Reaction transforming H2SO4 into APS, PP
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product APS simple molecule nd nd
product PP simple molecule nd nd
reactant H2SO4 simple molecule nd nd
ssuEADCB_mRNA SsuC
Name: ssuEADCB_mRNA -> SsuC
Description: Translation of SsuC
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant ssuEADCB_mRNA RNA nd nd
product SsuC protein nd nd
SsuA + SsuC + SsuB SsuA-SsuC-SsuB
Name: SsuA + SsuC + SsuB -> SsuA-SsuC-SsuB
Description: Reaction transforming SsuA, SsuC, SsuB into SsuA-SsuC-SsuB
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant SsuA protein nd nd
product SsuA-SsuC-SsuB complex nd nd
reactant SsuC protein nd nd
reactant SsuB protein nd nd
an aliphatic sulfonate_Ext an aliphatic sulfonate + phosphate
Name: an aliphatic sulfonate_Ext -> an aliphatic sulfonate + phosphate
Description: Transport of an aliphatic sulfonate_Ext through a bacterial membrane, leading to the presence of an aliphatic sulfonate, phosphate inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product phosphate simple molecule nd nd
product an aliphatic sulfonate simple molecule nd nd
reactant an aliphatic sulfonate_Ext simple molecule nd nd
tauABCD_mRNA TauC
Name: tauABCD_mRNA -> TauC
Description: Translation of TauC
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant tauABCD_mRNA RNA nd nd
product TauC protein nd nd
TauA + TauC + TauB TauA-TauC-TauB
Name: TauA + TauC + TauB -> TauA-TauC-TauB
Description: Reaction transforming TauA, TauC, TauB into TauA-TauC-TauB
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant TauC protein nd nd
product TauA-TauC-TauB complex nd nd
reactant TauA protein nd nd
reactant TauB protein nd nd
taufon_Ext taufon + phosphate
Name: taufon_Ext -> taufon + phosphate
Description: Transport of taufon_Ext through a bacterial membrane, leading to the presence of taufon, phosphate inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant taufon_Ext simple molecule nd nd
product taufon simple molecule nd nd
product phosphate simple molecule nd nd
cysPUWAM_mRNA CysP
Name: cysPUWAM_mRNA -> CysP
Description: Translation of CysP
Type: translation
Components:
Function Name Type Evidence Reference(s)
product CysP protein nd nd
reactant cysPUWAM_mRNA RNA nd nd
CysA + CysW + CysU + CysP CysA-CysW-CysU-CysP
Name: CysA + CysW + CysU + CysP -> CysA-CysW-CysU-CysP
Description: Reaction transforming CysA, CysW, CysU, CysP into CysA-CysW-CysU-CysP
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant CysP protein nd nd
product CysA-CysW-CysU-CysP complex nd nd
reactant CysW protein nd nd
reactant CysA protein nd nd
reactant CysU protein nd nd
selenite_Ext selenite + phosphate
Name: selenite_Ext -> selenite + phosphate
Description: Transport of selenite_Ext through a bacterial membrane, leading to the presence of selenite, phosphate inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product selenite simple molecule nd nd
product phosphate simple molecule nd nd
reactant selenite_Ext simple molecule nd nd
selenate_Ext selenate + phosphate
Name: selenate_Ext -> selenate + phosphate
Description: Transport of selenate_Ext through a bacterial membrane, leading to the presence of selenate, phosphate inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product phosphate simple molecule nd nd
product selenate simple molecule nd nd
reactant selenate_Ext simple molecule nd nd
H2SO4_Ext H2SO4 + phosphate
Name: H2SO4_Ext -> H2SO4 + phosphate
Description: Transport of H2SO4_Ext through a bacterial membrane, leading to the presence of H2SO4, phosphate inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product H2SO4 simple molecule nd nd
reactant H2SO4_Ext simple molecule nd nd
product phosphate simple molecule nd nd
thiosulfate_Ext phosphate + thiosulfate
Name: thiosulfate_Ext -> phosphate + thiosulfate
Description: Transport of thiosulfate_Ext through a bacterial membrane, leading to the presence of phosphate, thiosulfate inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product thiosulfate simple molecule nd nd
reactant thiosulfate_Ext simple molecule nd nd
product phosphate simple molecule nd nd
cysDNC_mRNA CysD
Name: cysDNC_mRNA -> CysD
Description: Translation of CysD
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant cysDNC_mRNA RNA nd nd
product CysD protein nd nd
cysPUWAM_mRNA CysW
Name: cysPUWAM_mRNA -> CysW
Description: Translation of CysW
Type: translation
Components:
Function Name Type Evidence Reference(s)
product CysW protein nd nd
reactant cysPUWAM_mRNA RNA nd nd
Sbp + CysW + CysU + CysA Sbp-CysW-CysU-CysA
Name: Sbp + CysW + CysU + CysA -> Sbp-CysW-CysU-CysA
Description: Reaction transforming Sbp, CysW, CysU, CysA into Sbp-CysW-CysU-CysA
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant CysU protein nd nd
reactant Sbp protein nd nd
reactant CysA protein nd nd
reactant CysW protein nd nd
product Sbp-CysW-CysU-CysA complex nd nd
cbl_mRNA Cbl
Name: cbl_mRNA -> Cbl
Description: Translation of Cbl
Type: translation
Components:
Function Name Type Evidence Reference(s)
product Cbl protein nd nd
reactant cbl_mRNA RNA nd nd
tauABCD_mRNA TauD
Name: tauABCD_mRNA -> TauD
Description: Translation of TauD
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant tauABCD_mRNA RNA nd nd
product TauD protein nd nd
taufon + ketoglutarate + oxygen aminoacetaldehyde + sulfite + suc + CO2
Name: taufon + ketoglutarate + oxygen -> aminoacetaldehyde + sulfite + suc + CO2
Description: Reaction transforming taufon, ketoglutarate, oxygen into aminoacetaldehyde, sulfite , suc , CO2
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product CO2 simple molecule nd nd
reactant taufon simple molecule nd nd
product suc simple molecule nd nd
reactant oxygen simple molecule nd nd
product aminoacetaldehyde simple molecule nd nd
product sulfite simple molecule nd nd
reactant ketoglutarate simple molecule nd nd
cysPUWAM_mRNA CysM
Name: cysPUWAM_mRNA -> CysM
Description: Translation of CysM
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant cysPUWAM_mRNA RNA nd nd
product CysM protein nd nd
L-cysteine pyruvate + ammonia + sulfide
Name: L-cysteine -> pyruvate + ammonia + sulfide
Description: Reaction transforming L-cysteine into pyruvate, ammonia , sulfide
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product sulfide simple molecule nd nd
reactant L-cysteine simple molecule nd nd
product pyruvate simple molecule nd nd
product ammonia simple molecule nd nd
acetylserine + sulfide L-cysteine + acetate
Name: acetylserine + sulfide -> L-cysteine + acetate
Description: Reaction transforming acetylserine, sulfide into L-cysteine, acetate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant sulfide simple molecule nd nd
product L-cysteine simple molecule nd nd
reactant acetylserine simple molecule nd nd
product acetate simple molecule nd nd
cysB_mRNA CysB
Name: cysB_mRNA -> CysB
Description: Translation of CysB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant cysB_mRNA RNA nd nd
product CysB protein nd nd
cysK_mRNA CysK
Name: cysK_mRNA -> CysK
Description: Translation of CysK
Type: translation
Components:
Function Name Type Evidence Reference(s)
product CysK protein nd nd
reactant cysK_mRNA RNA nd nd
tauABCD_mRNA TauB
Name: tauABCD_mRNA -> TauB
Description: Translation of TauB
Type: translation
Components:
Function Name Type Evidence Reference(s)
product TauB protein nd nd
reactant tauABCD_mRNA RNA nd nd
cysPUWAM_mRNA CysA
Name: cysPUWAM_mRNA -> CysA
Description: Translation of CysA
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant cysPUWAM_mRNA RNA nd nd
product CysA protein nd nd
ssuEADCB_mRNA SsuD
Name: ssuEADCB_mRNA -> SsuD
Description: Translation of SsuD
Type: translation
Components:
Function Name Type Evidence Reference(s)
product SsuD protein nd nd
reactant ssuEADCB_mRNA RNA nd nd
isethionate + Reduced FMN + oxygen glycoaldehyde + sulfite + FMN
Name: isethionate + Reduced FMN + oxygen -> glycoaldehyde + sulfite + FMN
Description: Reaction transforming isethionate, Reduced FMN, oxygen into glycoaldehyde, sulfite , FMN
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant isethionate simple molecule nd nd
reactant Reduced FMN simple molecule nd nd
reactant oxygen simple molecule nd nd
product sulfite simple molecule nd nd
product glycoaldehyde simple molecule nd nd
product FMN simple molecule nd nd
alkanesulfonate + oxygen + Reduced FMN RCHO + sulfite + FMN
Name: alkanesulfonate + oxygen + Reduced FMN -> RCHO + sulfite + FMN
Description: Reaction transforming alkanesulfonate, oxygen, Reduced FMN into RCHO, sulfite , FMN
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product RCHO simple molecule nd nd
reactant Reduced FMN simple molecule nd nd
product FMN simple molecule nd nd
reactant alkanesulfonate simple molecule nd nd
product sulfite simple molecule nd nd
reactant oxygen simple molecule nd nd
butanesulfonate + oxygen + Reduced FMN butanal + sulfite + FMN
Name: butanesulfonate + oxygen + Reduced FMN -> butanal + sulfite + FMN
Description: Reaction transforming butanesulfonate, oxygen, Reduced FMN into butanal, sulfite , FMN
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product FMN simple molecule nd nd
reactant oxygen simple molecule nd nd
reactant Reduced FMN simple molecule nd nd
product butanal simple molecule nd nd
product sulfite simple molecule nd nd
reactant butanesulfonate simple molecule nd nd
cysJIH_mRNA CysJ
Name: cysJIH_mRNA -> CysJ
Description: Translation of CysJ
Type: translation
Components:
Function Name Type Evidence Reference(s)
product CysJ protein nd nd
reactant cysJIH_mRNA RNA nd nd
CysJ + CysI CysJ-CysI
Name: CysJ + CysI -> CysJ-CysI
Description: Reaction transforming CysJ, CysI into CysJ-CysI
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant CysI protein nd nd
product CysJ-CysI complex nd nd
reactant CysJ protein nd nd
sulfide sulfite
Name: sulfide -> sulfite
Description: Reaction transforming sulfide into sulfite
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant sulfide simple molecule nd nd
product sulfite simple molecule nd nd
reduced riboflavin riboflavin
Name: reduced riboflavin -> riboflavin
Description: Reaction transforming reduced riboflavin into riboflavin
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product riboflavin simple molecule nd nd
reactant reduced riboflavin simple molecule nd nd
cysPUWAM_mRNA CysU
Name: cysPUWAM_mRNA -> CysU
Description: Translation of CysU
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant cysPUWAM_mRNA RNA nd nd
product CysU protein nd nd
cysDNC_mRNA CysC
Name: cysDNC_mRNA -> CysC
Description: Translation of CysC
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant cysDNC_mRNA RNA nd nd
product CysC protein nd nd
APS PAPS
Name: APS -> PAPS
Description: Reaction transforming APS into PAPS
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant APS simple molecule nd nd
product PAPS simple molecule nd nd
tauABCD_mRNA TauA
Name: tauABCD_mRNA -> TauA
Description: Translation of TauA
Type: translation
Components:
Function Name Type Evidence Reference(s)
product TauA protein nd nd
reactant tauABCD_mRNA RNA nd nd
cysJIH_mRNA CysI
Name: cysJIH_mRNA -> CysI
Description: Translation of CysI
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant cysJIH_mRNA RNA nd nd
product CysI protein nd nd
ssuEADCB_mRNA SsuB
Name: ssuEADCB_mRNA -> SsuB
Description: Translation of SsuB
Type: translation
Components:
Function Name Type Evidence Reference(s)
product SsuB protein nd nd
reactant ssuEADCB_mRNA RNA nd nd
ssuEADCB_mRNA SsuE
Name: ssuEADCB_mRNA -> SsuE
Description: Translation of SsuE
Type: translation
Components:
Function Name Type Evidence Reference(s)
product SsuE protein nd nd
reactant ssuEADCB_mRNA RNA nd nd
Reduced FMN FMN
Name: Reduced FMN -> FMN
Description: Reaction transforming Reduced FMN into FMN
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant Reduced FMN simple molecule nd nd
product FMN simple molecule nd nd
ssuEADCB_mRNA SsuA
Name: ssuEADCB_mRNA -> SsuA
Description: Translation of SsuA
Type: translation
Components:
Function Name Type Evidence Reference(s)
product SsuA protein nd nd
reactant ssuEADCB_mRNA RNA nd nd



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