RegulonDB RegulonDB

Cra Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
FPP methylisocitrate (2S,3S)-2-methylcitrate L-malate DPG 2-(alpha-hydroxyethyl)-TPP 2-dehydro-3-deoxy-D-gluconate-6-phosphate 2-deoxy-D-glucose 6-phosphate 2-deoxyglucose_Ext ketoglutarate 2-P-D-glycerate 3-P-D-glycerate 5,10-methylenetetrahydrofolate 6-p gluconate 6-phosphogluconolactone AceA AceB AceE AceF AceK AcnA AcnB AdhE AroP BetA BetB BetI BetT CDP CMP CO2 Cra Crr CsgD CsgE CsgF CsgG CydA CydB CyoA CyoB CyoC CyoD CyoE CysG erythrose-4P D-fructose 6-phosphate fru_Ext D-glucosamine-6-phosphate chitosamine_Ext GAP D-mannitol_Ext D-mannose_Ext sedoheptulose-7-P SBP I-CIT Eda Edd Eno EnvC Epd FbaA FbaB Fe+2 FruA FruB FruK Fructose-1,6-diphosphate Fructose-1-phosphate GDP GMP GapA GcvH GcvP GcvT GlcC Glk GpmM HPr HydB HypF Icd L-4-hydroxy-2-keto-glutarate L-Ala-γ-D-Glu-Dap L-Ala-D-Glu-meso-A2pm-D-Ala phe phe_Ext trp trp_Ext tyr tyr_Ext Lpd ManX ManY ManZ MarA MarB MarR Mpl MtlA MtlD MtlR MurP N-acetyl-D-glucosamine-6-phosphate N-acetyl-D-mannosamine-6-phosphate NAcGlc_Ext N-acetyl-beta-D-mannosamine_Ext MurNAc-6-P MurNAc_Ext NirB NirC NirD pyruvate formate lyase, active form Pck PdhR PfkA Pgk PoxB Ppc PpsA PrpB PrpC PrpD PrpE PtsG PtsH PtsI PykF SAH SAM SetA This Gensor Unit is not yet available SgrT SucA SucB TpiA TreB UDP UDP-N-acetylmuramoyl-L-alanyl-D-gamma;-glutamyl-meso-2,6-diaminoheptanedioate-D-alanine UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate UDP-N-alpha-D-acetylmuramate UMP YahA YeaD YibQ Zwf a [2-oxoglutarate dehydrogenase E2 protein] N6-S-succinyldihydrolipoyl-L-lysine an enzyme N6-(dihydrolipoyl)lysine an enzyme N6-(lipoyl)lysine a [glycine-cleavage complex H protein] N6-aminomethyldihydrolipoyl-L-lysine a [glycine-cleavage complex H protein] N6-dihydrolipoyl-L-lysine a [glycine-cleavage complex H protein] N6-lipoyl-L-lysine an [enzyme] N6-(dihydrolipoyl)lysine lipoyl-domain an [enzyme] N6-(S-acetyldihydrolipoyl)lysine a [pyruvate dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine a [pyruvate dehydrogenase E2 protein] N6-lipoyl-L-lysine NDP NMP a phosphorylated isocitrate dehydrogenase 1-Alcohol a reduced electron acceptor aceBAK aceBAK_mRNA ethanal acetate acetoin ac-CoA acnA acnA_mRNA acnB acnB_mRNA adhE adhE_mRNA alpha-D-mannose-6-phosphate ammonia RCHO an isocitrate dehydrogenase an oxidized electron acceptor an ubiquinol an ubiquinol_Ext UQ aroP aroP_mRNA betIBA betIBA_mRNA betT betT_mRNA beta-glucose beta-D-glucose-6-P beta-glucose_Ext betaine aldehyde carbonate carbamoyl-P choline choline_Ext 2-methylaconitate cis-aconitate cit CoA csgDEFG csgDEFG_mRNA CsgA CsgA_Ext cyclic di-3',5'-guanylate cydAB cydAB_mRNA cyoABCDE cyoABCDE_mRNA DHAP PP edd-eda edd-eda_mRNA eno eno_mRNA epd-pgk epd-pgk-fbaA epd-pgk-fbaA_mRNA epd-pgk_mRNA erythronate-4P eth fbaB fbaB_mRNA fruBKA fruBKA_mRNA fructose-1,6-bisphosphate fructose-1-phosphate gapA gapA-yeaD gapA-yeaD_mRNA gapA_mRNA glcC glcC_mRNA glk glk_mRNA gly glycine betaine glyox gpmM-envC-yibQ gpmM-envC-yibQ_mRNA heme o HypE hypF hypF_mRNA icd icd_mRNA a-D-lactose a-D-lactose_Ext 5'pGpG manXYZ manXYZ_mRNA mannitol-1-phosphate marRAB marRAB_mRNA methyl beta-D-glucoside 6-phosphate b-methyl-D-glucoside_Ext mpl mpl_mRNA mtlADR mtlADR_mRNA nirBDC-cysG nirBDC-cysG_mRNA nitrite nitrite_Ext oxalacetate oxalo-succ oxygen_Ext pck pck_mRNA pdhR-aceEF-lpd pdhR-aceEF-lpd_mRNA pfkA pfkA_mRNA phosphate PEP PEP_Ext poxB poxB_mRNA ppc ppc_mRNA ppsA ppsA_mRNA precorrin-1 precorrin-2 propanoate propanoyl-CoA protoheme IX prpBCDE prpBCDE_mRNA ptsHI-crr ptsHI-crr_mRNA pykF pykF_mRNA BTS pyruvate formate-lyase sgrST-setA sgrST-setA_mRNA siroheme Precorrin suc suc-coa THF TDP tpiA tpiA_mRNA trehalose 6-phosphate trehalose_Ext uroporphyrinogen-III yahA yahA_mRNA zwf zwf_mRNA Cra Fructose-1,6-diphosphate Cra Fructose-1-phosphate CsgG CsgE CsgF ManZ ManY ManX CyoD CyoA CyoB CyoC FruB FruA CydA CydB NirD NirB AceE AceF Lpd Lpd GcvP GcvH GcvT SucA SucB Lpd MurP Crr TreB Crr PtsG Crr CO2 CoA CO2 CoA ketoglutarate CoA CO2 CO2 ammonia CO2 CO2 I-CIT cis-aconitate THF 5,10-methylenetetrahydrofolate CO2 gly cit oxalacetate cit BTS a [pyruvate dehydrogenase E2 protein] N6-lipoyl-L-lysine ac-CoA BTS CO2 an [enzyme] N6-(S-acetyldihydrolipoyl)lysine glyox suc BTS BTS L-malate ac-CoA CoA CoA ac-CoA CO2 glyox TDP ac-CoA CoA an [enzyme] N6-(S-acetyldihydrolipoyl)lysine 2-(alpha-hydroxyethyl)-TPP a [pyruvate dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine a [pyruvate dehydrogenase E2 protein] N6-lipoyl-L-lysine ammonia methylisocitrate 2-methylaconitate phosphate PP PP phosphate phosphate phosphate phosphate phosphate phosphate BTS BTS CO2 CO2 CO2 oxalacetate oxalacetate oxalacetate CoA CoA propanoyl-CoA PEP PEP PEP PEP oxalacetate BTS BTS BTS BTS BTS ethanal GAP GAP GAP BTS BTS BTS BTS 6-p gluconate BTS 2-dehydro-3-deoxy-D-gluconate-6-phosphate PEP_Ext PEP_Ext PEP_Ext PEP_Ext PEP_Ext PEP_Ext PEP_Ext PEP_Ext beta-D-glucose-6-P D-fructose 6-phosphate fru_Ext D-fructose 6-phosphate phosphate phosphate precorrin-1 BTS Cra


Gensor Unit       
Name: Cra
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): GO:0071555 - cell wall organization
GO:0045892 - negative regulation of transcription, DNA-templated
GO:0046325 - negative regulation of glucose import
GO:0047547 - 2-methylcitrate dehydratase activity
GO:0050440 - 2-methylcitrate synthase activity
GO:0050662 - coenzyme binding
GO:0043610 - regulation of carbohydrate utilization
GO:0044262 - cellular carbohydrate metabolic process
GO:0008270 - zinc ion binding
GO:0015797 - mannitol transport
GO:0003700 - transcription factor activity, sequence-specific DNA binding
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Components:
Function Name Type
RNA zwf_mRNA RNA


Reactions       
Showing 235 reactions
aceBAK aceBAK_mRNA
Name: aceBAK -> aceBAK_mRNA
Description: Transcription of transcription unit aceBAK; reaction activation by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant aceBAK gene nd nd
product aceBAK_mRNA RNA nd nd
acnA acnA_mRNA
Name: acnA -> acnA_mRNA
Description: Transcription of transcription unit acnA; reaction activation by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product acnA_mRNA RNA nd nd
reactant acnA gene nd nd
acnB acnB_mRNA
Name: acnB -> acnB_mRNA
Description: Transcription of transcription unit acnB; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant acnB gene nd nd
product acnB_mRNA RNA nd nd
adhE adhE_mRNA
Name: adhE -> adhE_mRNA
Description: Transcription of transcription unit adhE; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant adhE gene nd nd
product adhE_mRNA RNA nd nd
aroP aroP_mRNA
Name: aroP -> aroP_mRNA
Description: Transcription of transcription unit aroP; reaction activation by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant aroP gene nd nd
product aroP_mRNA RNA nd nd
betIBA betIBA_mRNA
Name: betIBA -> betIBA_mRNA
Description: Transcription of transcription unit betIBA; reaction inhibition by BetI.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant betIBA gene nd nd
product betIBA_mRNA RNA nd nd
betT betT_mRNA
Name: betT -> betT_mRNA
Description: Transcription of transcription unit betT; reaction inhibition by BetI.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant betT gene nd nd
product betT_mRNA RNA nd nd
csgDEFG csgDEFG_mRNA
Name: csgDEFG -> csgDEFG_mRNA
Description: Transcription of transcription unit csgDEFG; reaction activation by BasR-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product csgDEFG_mRNA RNA nd nd
reactant csgDEFG gene nd nd
cydAB cydAB_mRNA
Name: cydAB -> cydAB_mRNA
Description: Transcription of transcription unit cydAB; reaction activation by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product cydAB_mRNA RNA nd nd
reactant cydAB gene nd nd
cyoABCDE cyoABCDE_mRNA
Name: cyoABCDE -> cyoABCDE_mRNA
Description: Transcription of transcription unit cyoABCDE; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant cyoABCDE gene nd nd
product cyoABCDE_mRNA RNA nd nd
edd-eda edd-eda_mRNA
Name: edd-eda -> edd-eda_mRNA
Description: Transcription of transcription unit edd-eda; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product edd-eda_mRNA RNA nd nd
reactant edd-eda gene nd nd
eno eno_mRNA
Name: eno -> eno_mRNA
Description: Transcription of transcription unit eno; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product eno_mRNA RNA nd nd
reactant eno gene nd nd
epd-pgk epd-pgk_mRNA
Name: epd-pgk -> epd-pgk_mRNA
Description: Transcription of transcription unit epd-pgk; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product epd-pgk_mRNA RNA nd nd
reactant epd-pgk gene nd nd
epd-pgk-fbaA epd-pgk-fbaA_mRNA
Name: epd-pgk-fbaA -> epd-pgk-fbaA_mRNA
Description: Transcription of transcription unit epd-pgk-fbaA; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product epd-pgk-fbaA_mRNA RNA nd nd
reactant epd-pgk-fbaA gene nd nd
fbaB fbaB_mRNA
Name: fbaB -> fbaB_mRNA
Description: Transcription of transcription unit fbaB; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product fbaB_mRNA RNA nd nd
reactant fbaB gene nd nd
fruBKA fruBKA_mRNA
Name: fruBKA -> fruBKA_mRNA
Description: Transcription of transcription unit fruBKA; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant fruBKA gene nd nd
product fruBKA_mRNA RNA nd nd
gapA gapA_mRNA
Name: gapA -> gapA_mRNA
Description: Transcription of transcription unit gapA; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant gapA gene nd nd
product gapA_mRNA RNA nd nd
gapA-yeaD gapA-yeaD_mRNA
Name: gapA-yeaD -> gapA-yeaD_mRNA
Description: Transcription of transcription unit gapA-yeaD; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant gapA-yeaD gene nd nd
product gapA-yeaD_mRNA RNA nd nd
glcC glcC_mRNA
Name: glcC -> glcC_mRNA
Description: Transcription of transcription unit glcC; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product glcC_mRNA RNA nd nd
reactant glcC gene nd nd
glk glk_mRNA
Name: glk -> glk_mRNA
Description: Transcription of transcription unit glk; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant glk gene nd nd
product glk_mRNA RNA nd nd
gpmM-envC-yibQ gpmM-envC-yibQ_mRNA
Name: gpmM-envC-yibQ -> gpmM-envC-yibQ_mRNA
Description: Transcription of transcription unit gpmM-envC-yibQ; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant gpmM-envC-yibQ gene nd nd
product gpmM-envC-yibQ_mRNA RNA nd nd
hypF hypF_mRNA
Name: hypF -> hypF_mRNA
Description: Transcription of transcription unit hypF; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant hypF gene nd nd
product hypF_mRNA RNA nd nd
icd icd_mRNA
Name: icd -> icd_mRNA
Description: Transcription of transcription unit icd; reaction activation by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant icd gene nd nd
product icd_mRNA RNA nd nd
manXYZ manXYZ_mRNA
Name: manXYZ -> manXYZ_mRNA
Description: Transcription of transcription unit manXYZ; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant manXYZ gene nd nd
product manXYZ_mRNA RNA nd nd
marRAB marRAB_mRNA
Name: marRAB -> marRAB_mRNA
Description: Transcription of transcription unit marRAB; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant marRAB gene nd nd
product marRAB_mRNA RNA nd nd
mpl mpl_mRNA
Name: mpl -> mpl_mRNA
Description: Transcription of transcription unit mpl; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product mpl_mRNA RNA nd nd
reactant mpl gene nd nd
mtlADR mtlADR_mRNA
Name: mtlADR -> mtlADR_mRNA
Description: Transcription of transcription unit mtlADR; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product mtlADR_mRNA RNA nd nd
reactant mtlADR gene nd nd
nirBDC-cysG nirBDC-cysG_mRNA
Name: nirBDC-cysG -> nirBDC-cysG_mRNA
Description: Transcription of transcription unit nirBDC-cysG; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product nirBDC-cysG_mRNA RNA nd nd
reactant nirBDC-cysG gene nd nd
pck pck_mRNA
Name: pck -> pck_mRNA
Description: Transcription of transcription unit pck; reaction activation by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product pck_mRNA RNA nd nd
reactant pck gene nd nd
pdhR-aceEF-lpd pdhR-aceEF-lpd_mRNA
Name: pdhR-aceEF-lpd -> pdhR-aceEF-lpd_mRNA
Description: Transcription of transcription unit pdhR-aceEF-lpd; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product pdhR-aceEF-lpd_mRNA RNA nd nd
reactant pdhR-aceEF-lpd gene nd nd
pfkA pfkA_mRNA
Name: pfkA -> pfkA_mRNA
Description: Transcription of transcription unit pfkA; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant pfkA gene nd nd
product pfkA_mRNA RNA nd nd
poxB poxB_mRNA
Name: poxB -> poxB_mRNA
Description: Transcription of transcription unit poxB; reaction activation by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant poxB gene nd nd
product poxB_mRNA RNA nd nd
ppc ppc_mRNA
Name: ppc -> ppc_mRNA
Description: Transcription of transcription unit ppc; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant ppc gene nd nd
product ppc_mRNA RNA nd nd
ppsA ppsA_mRNA
Name: ppsA -> ppsA_mRNA
Description: Transcription of transcription unit ppsA; reaction activation by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant ppsA gene nd nd
product ppsA_mRNA RNA nd nd
prpBCDE prpBCDE_mRNA
Name: prpBCDE -> prpBCDE_mRNA
Description: Transcription of transcription unit prpBCDE; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant prpBCDE gene nd nd
product prpBCDE_mRNA RNA nd nd
ptsHI-crr ptsHI-crr_mRNA
Name: ptsHI-crr -> ptsHI-crr_mRNA
Description: Transcription of transcription unit ptsHI-crr; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product ptsHI-crr_mRNA RNA nd nd
reactant ptsHI-crr gene nd nd
pykF pykF_mRNA
Name: pykF -> pykF_mRNA
Description: Transcription of transcription unit pykF; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product pykF_mRNA RNA nd nd
reactant pykF gene nd nd
sgrST-setA sgrST-setA_mRNA
Name: sgrST-setA -> sgrST-setA_mRNA
Description: Transcription of transcription unit sgrST-setA; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product sgrST-setA_mRNA RNA nd nd
reactant sgrST-setA gene nd nd
tpiA tpiA_mRNA
Name: tpiA -> tpiA_mRNA
Description: Transcription of transcription unit tpiA; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product tpiA_mRNA RNA nd nd
reactant tpiA gene nd nd
yahA yahA_mRNA
Name: yahA -> yahA_mRNA
Description: Transcription of transcription unit yahA; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product yahA_mRNA RNA nd nd
reactant yahA gene nd nd
zwf zwf_mRNA
Name: zwf -> zwf_mRNA
Description: Transcription of transcription unit zwf; reaction inhibition by Cra.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product zwf_mRNA RNA nd nd
reactant zwf gene nd nd
Cra + Fructose-1,6-diphosphate Cra-Fructose-1,6-diphosphate
Name: Cra + Fructose-1,6-diphosphate -> Cra-Fructose-1,6-diphosphate
Description: Reaction transforming Cra, Fructose-1,6-diphosphate into Cra-Fructose-1,6-diphosphate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant Cra protein nd nd
product Cra-Fructose-1,6-diphosphate complex nd nd
reactant Fructose-1,6-diphosphate simple molecule nd nd
Cra + Fructose-1-phosphate Cra-Fructose-1-phosphate
Name: Cra + Fructose-1-phosphate -> Cra-Fructose-1-phosphate
Description: Reaction transforming Cra, Fructose-1-phosphate into Cra-Fructose-1-phosphate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant Fructose-1-phosphate simple molecule nd nd
reactant Cra protein nd nd
product Cra-Fructose-1-phosphate complex nd nd
gapA-yeaD_mRNA GapA
Name: gapA-yeaD_mRNA -> GapA
Description: Translation of GapA
Type: translation
Components:
Function Name Type Evidence Reference(s)
product GapA protein nd nd
reactant gapA-yeaD_mRNA RNA nd nd
D-glyceraldehyde 3-phosphate + phosphate DPG
Name: D-glyceraldehyde 3-phosphate + phosphate -> DPG
Description: Reaction transforming D-glyceraldehyde 3-phosphate, phosphate into DPG
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant D-glyceraldehyde 3-phosphate simple molecule nd nd
product DPG simple molecule nd nd
reactant phosphate simple molecule nd nd
nirBDC-cysG_mRNA NirC
Name: nirBDC-cysG_mRNA -> NirC
Description: Translation of NirC
Type: translation
Components:
Function Name Type Evidence Reference(s)
product NirC protein nd nd
reactant nirBDC-cysG_mRNA RNA nd nd
nitrite_Ext nitrite
Name: nitrite_Ext -> nitrite
Description: Transport of nitrite_Ext through a bacterial membrane, leading to the presence of nitrite inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant nitrite_Ext simple molecule nd nd
product nitrite simple molecule nd nd
csgDEFG_mRNA CsgF
Name: csgDEFG_mRNA -> CsgF
Description: Translation of CsgF
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant csgDEFG_mRNA RNA nd nd
product CsgF protein nd nd
CsgG + CsgE + CsgF CsgG-CsgE-CsgF
Name: CsgG + CsgE + CsgF -> CsgG-CsgE-CsgF
Description: Reaction transforming CsgG, CsgE, CsgF into CsgG-CsgE-CsgF
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product CsgG-CsgE-CsgF complex nd nd
reactant CsgF protein nd nd
reactant CsgG protein nd nd
reactant CsgE protein nd nd
CsgA_Ext CsgA
Name: CsgA_Ext -> CsgA
Description: Transport of CsgA_Ext through a bacterial membrane, leading to the presence of CsgA inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant CsgA_Ext simple molecule nd nd
product CsgA simple molecule nd nd
edd-eda_mRNA Edd
Name: edd-eda_mRNA -> Edd
Description: Translation of Edd
Type: translation
Components:
Function Name Type Evidence Reference(s)
product Edd protein nd nd
reactant edd-eda_mRNA RNA nd nd
6-p gluconate 2-dehydro-3-deoxy-D-gluconate-6-phosphate
Name: 6-p gluconate -> 2-dehydro-3-deoxy-D-gluconate-6-phosphate
Description: Reaction transforming 6-p gluconate into 2-dehydro-3-deoxy-D-gluconate-6-phosphate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product 2-dehydro-3-deoxy-D-gluconate-6-phosphate simple molecule nd nd
reactant 6-p gluconate simple molecule nd nd
mtlADR_mRNA MtlR
Name: mtlADR_mRNA -> MtlR
Description: Translation of MtlR
Type: translation
Components:
Function Name Type Evidence Reference(s)
product MtlR protein nd nd
reactant mtlADR_mRNA RNA nd nd
hypF_mRNA HypF
Name: hypF_mRNA -> HypF
Description: Translation of HypF
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant hypF_mRNA RNA nd nd
product HypF protein nd nd
carbamoyl-P + HypE HydB + PP + phosphate
Name: carbamoyl-P + HypE -> HydB + PP + phosphate
Description: Reaction transforming carbamoyl-P, HypE into HydB, PP , phosphate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant HypE simple molecule nd nd
product HydB simple molecule nd nd
product phosphate simple molecule nd nd
reactant carbamoyl-P simple molecule nd nd
product PP simple molecule nd nd
ppc_mRNA Ppc
Name: ppc_mRNA -> Ppc
Description: Translation of Ppc
Type: translation
Components:
Function Name Type Evidence Reference(s)
product Ppc protein nd nd
reactant ppc_mRNA RNA nd nd
phosphate + oxalacetate PEP + carbonate
Name: phosphate + oxalacetate -> PEP + carbonate
Description: Reaction transforming phosphate, oxalacetate into PEP, carbonate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product carbonate simple molecule nd nd
reactant phosphate simple molecule nd nd
product PEP simple molecule nd nd
reactant oxalacetate simple molecule nd nd
csgDEFG_mRNA CsgE
Name: csgDEFG_mRNA -> CsgE
Description: Translation of CsgE
Type: translation
Components:
Function Name Type Evidence Reference(s)
product CsgE protein nd nd
reactant csgDEFG_mRNA RNA nd nd
prpBCDE_mRNA PrpB
Name: prpBCDE_mRNA -> PrpB
Description: Translation of PrpB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant prpBCDE_mRNA RNA nd nd
product PrpB protein nd nd
methylisocitrate suc + pyruvate
Name: methylisocitrate -> suc + pyruvate
Description: Reaction transforming methylisocitrate into suc, pyruvate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product suc simple molecule nd nd
reactant methylisocitrate simple molecule nd nd
product pyruvate simple molecule nd nd
aceBAK_mRNA AceK
Name: aceBAK_mRNA -> AceK
Description: Translation of AceK
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant aceBAK_mRNA RNA nd nd
product AceK protein nd nd
a phosphorylated isocitrate dehydrogenase an isocitrate dehydrogenase + phosphate
Name: a phosphorylated isocitrate dehydrogenase -> an isocitrate dehydrogenase + phosphate
Description: Reaction transforming a phosphorylated isocitrate dehydrogenase into an isocitrate dehydrogenase, phosphate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant a phosphorylated isocitrate dehydrogenase simple molecule nd nd
product an isocitrate dehydrogenase simple molecule nd nd
product phosphate simple molecule nd nd
an isocitrate dehydrogenase a phosphorylated isocitrate dehydrogenase
Name: an isocitrate dehydrogenase -> a phosphorylated isocitrate dehydrogenase
Description: Reaction transforming an isocitrate dehydrogenase into a phosphorylated isocitrate dehydrogenase
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product a phosphorylated isocitrate dehydrogenase simple molecule nd nd
reactant an isocitrate dehydrogenase simple molecule nd nd
aroP_mRNA AroP
Name: aroP_mRNA -> AroP
Description: Translation of AroP
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant aroP_mRNA RNA nd nd
product AroP protein nd nd
L-tryptophan_Ext L-tryptophan
Name: L-tryptophan_Ext -> L-tryptophan
Description: Transport of L-tryptophan_Ext through a bacterial membrane, leading to the presence of L-tryptophan inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant L-tryptophan_Ext simple molecule nd nd
product L-tryptophan simple molecule nd nd
L-tyrosine_Ext L-tyrosine
Name: L-tyrosine_Ext -> L-tyrosine
Description: Transport of L-tyrosine_Ext through a bacterial membrane, leading to the presence of L-tyrosine inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product L-tyrosine simple molecule nd nd
reactant L-tyrosine_Ext simple molecule nd nd
L-phenylalanine_Ext L-phenylalanine
Name: L-phenylalanine_Ext -> L-phenylalanine
Description: Transport of L-phenylalanine_Ext through a bacterial membrane, leading to the presence of L-phenylalanine inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product L-phenylalanine simple molecule nd nd
reactant L-phenylalanine_Ext simple molecule nd nd
poxB_mRNA PoxB
Name: poxB_mRNA -> PoxB
Description: Translation of PoxB
Type: translation
Components:
Function Name Type Evidence Reference(s)
product PoxB protein nd nd
reactant poxB_mRNA RNA nd nd
pyruvate + acetaldehyde acetoin + CO2
Name: pyruvate + acetaldehyde -> acetoin + CO2
Description: Reaction transforming pyruvate, acetaldehyde into acetoin, CO2
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product acetoin simple molecule nd nd
reactant pyruvate simple molecule nd nd
reactant acetaldehyde simple molecule nd nd
product CO2 simple molecule nd nd
pyruvate + ubiquinone CO2 + an ubiquinol + acetate