RegulonDB RegulonDB

CsgD Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
AdrA CsgA CsgB CsgC CsgD CsgE CsgF CsgG FliE FliF FliG FliH FliI FliJ FliK IraP L-cysteine NlpA PepD WrbA YccJ YccT YhbS YhbT a dipeptide quinol quinone amino acids adrA adrA_mRNA an electron-transfer-related quinol an electron-transfer-related quinone csgBAC csgBAC_mRNA csgDEFG csgDEFG_mRNA CsgA CsgA_Ext Cys-Gly fliE fliE_mRNA fliFGHIJK fliFGHIJK_mRNA glycine iraP iraP_mRNA nlpA nlpA_mRNA pepD pepD_mRNA wrbA-yccJ wrbA-yccJ_mRNA yccT yccT_mRNA yhbTS yhbTS_mRNA CsgG CsgE CsgF


Gensor Unit       
Name: CsgD
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): biological_process GO:0015811 - L-cystine transport
GO:0006865 - amino acid transport
GO:1990000 - amyloid fibril formation
GO:0044780 - bacterial-type flagellum assembly
GO:0071973 - bacterial-type flagellum-dependent cell motility
GO:0022610 - biological adhesion
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cellular_component GO:0009424 - bacterial-type flagellum hook
GO:0009279 - cell outer membrane
GO:0005829 - cytosol
GO:0031246 - intrinsic component of periplasmic side of cell outer membrane
GO:0016020 - membrane
GO:0030288 - outer membrane-bounded periplasmic space
GO:0042597 - periplasmic space
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molecular_function GO:0010181 - FMN binding
GO:0015184 - L-cystine transmembrane transporter activity
GO:0003955 - NAD(P)H dehydrogenase (quinone) activity
GO:0103046 - alanylglutamate dipeptidase activity
GO:0016597 - amino acid binding
GO:0043856 - anti-sigma factor antagonist activity
GO:0000986 - bacterial-type proximal promoter sequence-specific DNA binding
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Components: Show/Hide Components Table (103 more...)
Function Name Type
simple_molecule CsgA simple_molecule
simple_molecule CsgA_Ext simple_molecule
protein CsgB protein
protein CsgC protein
protein CsgD protein
protein CsgE protein
complex CsgE-CsgG complex
protein CsgF protein
protein CsgG protein
simple_molecule Cys-Gly simple_molecule
protein DgcC protein
protein FlgB protein
protein FlgC protein
protein FlgF protein
protein FlgG protein
protein FlgH protein
protein FlgI protein
protein FlgM protein
protein FlgN protein
protein FlhA protein
complex FlhA-FlhB-FliO-FliP-FliQ-FliR-FliH-FliI-FliJ complex
protein FlhB protein
protein FliA protein
complex FliA-RpoB-RpoC-RpoA complex
protein FliE protein
protein FliF protein
protein FliG protein
complex FliG-FliM-FliN complex
protein FliH protein
protein FliI protein
protein FliJ protein
protein FliK protein
protein FliL protein
protein FliM protein
protein FliN protein
complex FliN-FliM-FliG-FlgH-MotA-MotB-FlgB-FlgC-FlgF-FlgG-FlgI-FliF-FliE-FliL complex
protein FliO protein
protein FliP protein
protein FliQ protein
protein FliR protein
protein FliZ protein
protein IraP protein
simple_molecule L-glutamate simple_molecule
protein MotA protein
protein MotB protein
protein NlpA protein
protein PepD protein
protein RpoA protein
protein RpoB protein
protein RpoC protein
protein TcyJ protein
protein TcyL protein
protein TcyN protein
complex TcyN-TcyL-TcyJ complex
protein WrbA protein
protein YccJ protein
protein YccT protein
protein YhbS protein
protein YhbT protein
simple_molecule ala-glu simple_molecule
simple_molecule alanine simple_molecule
simple_molecule amino acids simple_molecule
simple_molecule c-di-GMP simple_molecule
gene csgBAC gene
RNA csgBAC_mRNA RNA
gene csgDEFG gene
RNA csgDEFG_mRNA RNA
simple_molecule cysteine simple_molecule
simple_molecule cysteine_Ext simple_molecule
simple_molecule cystine simple_molecule
simple_molecule cystine_Ext simple_molecule
gene dgcC gene
RNA dgcC_mRNA RNA
simple_molecule dipeptide simple_molecule
simple_molecule diphosphate simple_molecule
simple_molecule electron-transfer quinol simple_molecule
simple_molecule electron-transfer quinone simple_molecule
gene flgMN gene
RNA flgMN_mRNA RNA
gene fliAZ-tcyJ gene
RNA fliAZ-tcyJ_mRNA RNA
gene fliE gene
RNA fliE_mRNA RNA
gene fliFGHIJK gene
RNA fliFGHIJK_mRNA RNA
simple_molecule glycine simple_molecule
simple_molecule guanosine-triphosphate simple_molecule
gene iraP gene
RNA iraP_mRNA RNA
simple_molecule menaquinol simple_molecule
gene nlpA gene
RNA nlpA_mRNA RNA
gene pepD gene
RNA pepD_mRNA RNA
simple_molecule ubiquinol simple_molecule
simple_molecule ubiquinone simple_molecule
simple_molecule vitamin K2 simple_molecule
gene wrbA-yccJ gene
RNA wrbA-yccJ_mRNA RNA
gene yccT gene
RNA yccT_mRNA RNA
gene yhbTS gene
RNA yhbTS_mRNA RNA


Reactions       
Showing 57 reactions
CsgD csgBAC csgBAC_mRNA
Name: csgBAC -> csgBAC_mRNA
Description: Transcription of transcription unit csgBAC. Reaction activation by CsgD.
Type: transcription
Pathway Components: csgBAC - CsgD -> csgBAC_mRNA
Components:
Function Name Type Evidence Reference(s)
activator CsgD protein nd nd
reactant csgBAC gene nd nd
product csgBAC_mRNA RNA nd nd
CsgD csgDEFG csgDEFG_mRNA
Name: csgDEFG -> csgDEFG_mRNA
Description: Transcription of transcription unit csgDEFG. Reaction activation by CsgD.
Type: transcription
Pathway Components: csgDEFG - CsgD -> csgDEFG_mRNA
Components:
Function Name Type Evidence Reference(s)
activator CsgD protein nd nd
reactant csgDEFG gene nd nd
product csgDEFG_mRNA RNA nd nd
CsgD dgcC dgcC_mRNA
Name: dgcC -> dgcC_mRNA
Description: Transcription of transcription unit dgcC. Reaction activation by CsgD.
Type: transcription
Pathway Components: dgcC - CsgD -> dgcC_mRNA
Components:
Function Name Type Evidence Reference(s)
activator CsgD protein nd nd
reactant dgcC gene nd nd
product dgcC_mRNA RNA nd nd
CsgD flgMN flgMN_mRNA
Name: flgMN -> flgMN_mRNA
Description: Transcription of transcription unit flgMN. Reaction inhibition by CsgD.
Type: transcription
Pathway Components: flgMN - CsgD -> flgMN_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor CsgD protein nd nd
reactant flgMN gene nd nd
product flgMN_mRNA RNA nd nd
CsgD fliAZ-tcyJ fliAZ-tcyJ_mRNA
Name: fliAZ-tcyJ -> fliAZ-tcyJ_mRNA
Description: Transcription of transcription unit fliAZ-tcyJ. Reaction inhibition by CsgD.
Type: transcription
Pathway Components: fliAZ-tcyJ - CsgD -> fliAZ-tcyJ_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor CsgD protein nd nd
reactant fliAZ-tcyJ gene nd nd
product fliAZ-tcyJ_mRNA RNA nd nd
CsgD fliE fliE_mRNA
Name: fliE -> fliE_mRNA
Description: Transcription of transcription unit fliE. Reaction inhibition by CsgD.
Type: transcription
Pathway Components: fliE - CsgD -> fliE_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor CsgD protein nd nd
reactant fliE gene nd nd
product fliE_mRNA RNA nd nd
CsgD fliFGHIJK fliFGHIJK_mRNA
Name: fliFGHIJK -> fliFGHIJK_mRNA
Description: Transcription of transcription unit fliFGHIJK. Reaction inhibition by CsgD.
Type: transcription
Pathway Components: fliFGHIJK - CsgD -> fliFGHIJK_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor CsgD protein nd nd
reactant fliFGHIJK gene nd nd
product fliFGHIJK_mRNA RNA nd nd
CsgD iraP iraP_mRNA
Name: iraP -> iraP_mRNA
Description: Transcription of transcription unit iraP. Reaction activation by CsgD.
Type: transcription
Pathway Components: iraP - CsgD -> iraP_mRNA
Components:
Function Name Type Evidence Reference(s)
activator CsgD protein nd nd
reactant iraP gene nd nd
product iraP_mRNA RNA nd nd
CsgD nlpA nlpA_mRNA
Name: nlpA -> nlpA_mRNA
Description: Transcription of transcription unit nlpA. Reaction activation by CsgD.
Type: transcription
Pathway Components: nlpA - CsgD -> nlpA_mRNA
Components:
Function Name Type Evidence Reference(s)
activator CsgD protein nd nd
reactant nlpA gene nd nd
product nlpA_mRNA RNA nd nd
CsgD pepD pepD_mRNA
Name: pepD -> pepD_mRNA
Description: Transcription of transcription unit pepD. Reaction inhibition by CsgD.
Type: transcription
Pathway Components: pepD - CsgD -> pepD_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor CsgD protein nd nd
reactant pepD gene nd nd
product pepD_mRNA RNA nd nd
CsgD wrbA-yccJ wrbA-yccJ_mRNA
Name: wrbA-yccJ -> wrbA-yccJ_mRNA
Description: Transcription of transcription unit wrbA-yccJ. Reaction activation by CsgD.
Type: transcription
Pathway Components: wrbA-yccJ - CsgD -> wrbA-yccJ_mRNA
Components:
Function Name Type Evidence Reference(s)
activator CsgD protein nd nd
reactant wrbA-yccJ gene nd nd
product wrbA-yccJ_mRNA RNA nd nd
CsgD yccT yccT_mRNA
Name: yccT -> yccT_mRNA
Description: Transcription of transcription unit yccT. Reaction activation by CsgD.
Type: transcription
Pathway Components: yccT - CsgD -> yccT_mRNA
Components:
Function Name Type Evidence Reference(s)
activator CsgD protein nd nd
reactant yccT gene nd nd
product yccT_mRNA RNA nd nd
CsgD yhbTS yhbTS_mRNA
Name: yhbTS -> yhbTS_mRNA
Description: Transcription of transcription unit yhbTS. Reaction inhibition by CsgD.
Type: transcription
Pathway Components: yhbTS - CsgD -> yhbTS_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor CsgD protein nd nd
reactant yhbTS gene nd nd
product yhbTS_mRNA RNA nd nd
nlpA_mRNA NlpA
Name: nlpA_mRNA -> NlpA
Description: Translation of NlpA
Type: translation
Pathway Components: nlpA_mRNA -> NlpA
Components:
Function Name Type Evidence Reference(s)
product NlpA protein nd nd
reactant nlpA_mRNA RNA nd nd
pepD_mRNA PepD
Name: pepD_mRNA -> PepD
Description: Translation of PepD
Type: translation
Pathway Components: pepD_mRNA -> PepD
Components:
Function Name Type Evidence Reference(s)
product PepD protein nd nd
reactant pepD_mRNA RNA nd nd
PepD ala-glu L-glutamate + alanine
Name: ala-glu -> L-glutamate + alanine
Description: Reaction transforming ala-glu into L-glutamate, alanine
Type: state transition
Pathway Components: ala-glu - PepD -> L-glutamate + alanine
Components:
Function Name Type Evidence Reference(s)
product L-glutamate simple_molecule nd nd
catalyzer PepD protein nd nd
reactant ala-glu simple_molecule nd nd
product alanine simple_molecule nd nd
PepD dipeptide amino acids
Name: dipeptide -> amino acids
Description: Reaction transforming dipeptide into amino acids
Type: state transition
Pathway Components: dipeptide - PepD -> amino acids
Components:
Function Name Type Evidence Reference(s)
catalyzer PepD protein nd nd
product amino acids simple_molecule nd nd
reactant dipeptide simple_molecule nd nd
PepD Cys-Gly cysteine + glycine
Name: Cys-Gly -> cysteine + glycine
Description: Reaction transforming Cys-Gly into cysteine, glycine
Type: state transition
Pathway Components: Cys-Gly - PepD -> cysteine + glycine
Components:
Function Name Type Evidence Reference(s)
reactant Cys-Gly simple_molecule nd nd
catalyzer PepD protein nd nd
product cysteine simple_molecule nd nd
product glycine simple_molecule nd nd
fliFGHIJK_mRNA FliF
Name: fliFGHIJK_mRNA -> FliF
Description: Translation of FliF
Type: translation
Pathway Components: fliFGHIJK_mRNA -> FliF
Components:
Function Name Type Evidence Reference(s)
product FliF protein nd nd
reactant fliFGHIJK_mRNA RNA nd nd
Protein Monomers Protein complex
Name: FlgG + FliF + FlgB + MotA + FlgI + FlgF + FliG + FliL + FlgC + FlgH + MotB + FliM + FliE + FliN -> FliN-FliM-FliG-FlgH-MotA-MotB-FlgB-FlgC-FlgF-FlgG-FlgI-FliF-FliE-FliL
Description: Reaction transforming FlgG, FliF, FlgB, MotA, FlgI, FlgF, FliG, FliL, FlgC, FlgH, MotB, FliM, FliE, FliN into FliN-FliM-FliG-FlgH-MotA-MotB-FlgB-FlgC-FlgF-FlgG-FlgI-FliF-FliE-FliL
Type: state transition
Pathway Components: FlgG + FliF + FlgB + MotA + FlgI + FlgF + FliG + FliL + FlgC + FlgH + MotB + FliM + FliE + FliN -> FliN-FliM-FliG-FlgH-MotA-MotB-FlgB-FlgC-FlgF-FlgG-FlgI-FliF-FliE-FliL
Components: Show/Hide Components Table
fliFGHIJK_mRNA FliG
Name: fliFGHIJK_mRNA -> FliG
Description: Translation of FliG
Type: translation
Pathway Components: fliFGHIJK_mRNA -> FliG
Components:
Function Name Type Evidence Reference(s)
product FliG protein nd nd
reactant fliFGHIJK_mRNA RNA nd nd
FliM + FliN + FliG FliG-FliM-FliN
Name: FliM + FliN + FliG -> FliG-FliM-FliN
Description: Reaction transforming FliM, FliN, FliG into FliG-FliM-FliN
Type: state transition
Pathway Components: FliM + FliN + FliG -> FliG-FliM-FliN
Components:
Function Name Type Evidence Reference(s)
reactant FliG protein nd nd
product FliG-FliM-FliN complex nd nd
reactant FliM protein nd nd
reactant FliN protein nd nd
fliFGHIJK_mRNA FliH
Name: fliFGHIJK_mRNA -> FliH
Description: Translation of FliH
Type: translation
Pathway Components: fliFGHIJK_mRNA -> FliH
Components:
Function Name Type Evidence Reference(s)
product FliH protein nd nd
reactant fliFGHIJK_mRNA RNA nd nd
Protein Monomers FlhA-FlhB-FliO-FliP-FliQ-FliR-FliH-FliI-FliJ
Name: FliJ + FliR + FliO + FliP + FliI + FlhB + FlhA + FliH + FliQ -> FlhA-FlhB-FliO-FliP-FliQ-FliR-FliH-FliI-FliJ
Description: Reaction transforming FliJ, FliR, FliO, FliP, FliI, FlhB, FlhA, FliH, FliQ into FlhA-FlhB-FliO-FliP-FliQ-FliR-FliH-FliI-FliJ
Type: state transition
Pathway Components: FliJ + FliR + FliO + FliP + FliI + FlhB + FlhA + FliH + FliQ -> FlhA-FlhB-FliO-FliP-FliQ-FliR-FliH-FliI-FliJ
Components: Show/Hide Components Table
fliFGHIJK_mRNA FliI
Name: fliFGHIJK_mRNA -> FliI
Description: Translation of FliI
Type: translation
Pathway Components: fliFGHIJK_mRNA -> FliI
Components:
Function Name Type Evidence Reference(s)
product FliI protein nd nd
reactant fliFGHIJK_mRNA RNA nd nd
fliFGHIJK_mRNA FliJ
Name: fliFGHIJK_mRNA -> FliJ
Description: Translation of FliJ
Type: translation
Pathway Components: fliFGHIJK_mRNA -> FliJ
Components:
Function Name Type Evidence Reference(s)
product FliJ protein nd nd
reactant fliFGHIJK_mRNA RNA nd nd
fliFGHIJK_mRNA FliK
Name: fliFGHIJK_mRNA -> FliK
Description: Translation of FliK
Type: translation
Pathway Components: fliFGHIJK_mRNA -> FliK
Components:
Function Name Type Evidence Reference(s)
product FliK protein nd nd
reactant fliFGHIJK_mRNA RNA nd nd
wrbA-yccJ_mRNA WrbA
Name: wrbA-yccJ_mRNA -> WrbA
Description: Translation of WrbA
Type: translation
Pathway Components: wrbA-yccJ_mRNA -> WrbA
Components:
Function Name Type Evidence Reference(s)
product WrbA protein nd nd
reactant wrbA-yccJ_mRNA RNA nd nd
WrbA electron-transfer quinone electron-transfer quinol
Name: electron-transfer quinone -> electron-transfer quinol
Description: Reaction transforming electron-transfer quinone into electron-transfer quinol
Type: state transition
Pathway Components: electron-transfer quinone - WrbA -> electron-transfer quinol
Components:
Function Name Type Evidence Reference(s)
catalyzer WrbA protein nd nd
product electron-transfer quinol simple_molecule nd nd
reactant electron-transfer quinone simple_molecule nd nd
WrbA vitamin K2 menaquinol
Name: vitamin K2 -> menaquinol
Description: Reaction transforming vitamin K2 into menaquinol
Type: state transition
Pathway Components: vitamin K2 - WrbA -> menaquinol
Components:
Function Name Type Evidence Reference(s)
catalyzer WrbA protein nd nd
product menaquinol simple_molecule nd nd
reactant vitamin K2 simple_molecule nd nd
WrbA ubiquinone ubiquinol
Name: ubiquinone -> ubiquinol
Description: Reaction transforming ubiquinone into ubiquinol
Type: state transition
Pathway Components: ubiquinone - WrbA -> ubiquinol
Components:
Function Name Type Evidence Reference(s)
catalyzer WrbA protein nd nd
product ubiquinol simple_molecule nd nd
reactant ubiquinone simple_molecule nd nd
wrbA-yccJ_mRNA YccJ
Name: wrbA-yccJ_mRNA -> YccJ
Description: Translation of YccJ
Type: translation
Pathway Components: wrbA-yccJ_mRNA -> YccJ
Components:
Function Name Type Evidence Reference(s)
product YccJ protein nd nd
reactant wrbA-yccJ_mRNA RNA nd nd
csgBAC_mRNA CsgB
Name: csgBAC_mRNA -> CsgB
Description: Translation of CsgB
Type: translation
Pathway Components: csgBAC_mRNA -> CsgB
Components:
Function Name Type Evidence Reference(s)
product CsgB protein nd nd
reactant csgBAC_mRNA RNA nd nd
csgBAC_mRNA CsgA
Name: csgBAC_mRNA -> CsgA
Description: Translation of CsgA
Type: translation
Pathway Components: csgBAC_mRNA -> CsgA
Components:
Function Name Type Evidence Reference(s)
product CsgA simple_molecule nd nd
reactant csgBAC_mRNA RNA nd nd
csgBAC_mRNA CsgC
Name: csgBAC_mRNA -> CsgC
Description: Translation of CsgC
Type: translation
Pathway Components: csgBAC_mRNA -> CsgC
Components:
Function Name Type Evidence Reference(s)
product CsgC protein nd nd
reactant csgBAC_mRNA RNA nd nd
fliE_mRNA FliE
Name: fliE_mRNA -> FliE
Description: Translation of FliE
Type: translation
Pathway Components: fliE_mRNA -> FliE
Components:
Function Name Type Evidence Reference(s)
product FliE protein nd nd
reactant fliE_mRNA RNA nd nd
yccT_mRNA YccT
Name: yccT_mRNA -> YccT
Description: Translation of YccT
Type: translation
Pathway Components: yccT_mRNA -> YccT
Components:
Function Name Type Evidence Reference(s)
product YccT protein nd nd
reactant yccT_mRNA RNA nd nd
csgDEFG_mRNA CsgD
Name: csgDEFG_mRNA -> CsgD
Description: Translation of CsgD
Type: translation
Pathway Components: csgDEFG_mRNA -> CsgD
Components:
Function Name Type Evidence Reference(s)
product CsgD protein nd nd
reactant csgDEFG_mRNA RNA nd nd
csgDEFG_mRNA CsgE
Name: csgDEFG_mRNA -> CsgE
Description: Translation of CsgE
Type: translation
Pathway Components: csgDEFG_mRNA -> CsgE
Components:
Function Name Type Evidence Reference(s)
product CsgE protein nd nd
reactant csgDEFG_mRNA RNA nd nd
CsgG + CsgE CsgE-CsgG
Name: CsgG + CsgE -> CsgE-CsgG
Description: Reaction transforming CsgG, CsgE into CsgE-CsgG
Type: state transition
Pathway Components: CsgG + CsgE -> CsgE-CsgG
Components:
Function Name Type Evidence Reference(s)
reactant CsgE protein nd nd
product CsgE-CsgG complex nd nd
reactant CsgG protein nd nd
CsgE-CsgG CsgA_Ext CsgA
Name: CsgA_Ext -> CsgA
Description: Transport of CsgA_Ext through a bacterial membrane, leading to the presence of CsgA inside the cell.
Type: transport
Pathway Components: CsgA_Ext - CsgE-CsgG -> CsgA
Components:
Function Name Type Evidence Reference(s)
product CsgA simple_molecule nd nd
reactant CsgA_Ext simple_molecule nd nd
catalyzer CsgE-CsgG complex nd nd
csgDEFG_mRNA CsgF
Name: csgDEFG_mRNA -> CsgF
Description: Translation of CsgF
Type: translation
Pathway Components: csgDEFG_mRNA -> CsgF
Components:
Function Name Type Evidence Reference(s)
product CsgF protein nd nd
reactant csgDEFG_mRNA RNA nd nd
csgDEFG_mRNA CsgG
Name: csgDEFG_mRNA -> CsgG
Description: Translation of CsgG
Type: translation
Pathway Components: csgDEFG_mRNA -> CsgG
Components:
Function Name Type Evidence Reference(s)
product CsgG protein nd nd
reactant csgDEFG_mRNA RNA nd nd
flgMN_mRNA FlgM
Name: flgMN_mRNA -> FlgM
Description: Translation of FlgM
Type: translation
Pathway Components: flgMN_mRNA -> FlgM
Components:
Function Name Type Evidence Reference(s)
product FlgM protein nd nd
reactant flgMN_mRNA RNA nd nd
flgMN_mRNA FlgN
Name: flgMN_mRNA -> FlgN
Description: Translation of FlgN
Type: translation
Pathway Components: flgMN_mRNA -> FlgN
Components:
Function Name Type Evidence Reference(s)
product FlgN protein nd nd
reactant flgMN_mRNA RNA nd nd
dgcC_mRNA DgcC
Name: dgcC_mRNA -> DgcC
Description: Translation of DgcC
Type: translation
Pathway Components: dgcC_mRNA -> DgcC
Components:
Function Name Type Evidence Reference(s)
product DgcC protein nd nd
reactant dgcC_mRNA RNA nd nd
DgcC c-di-GMP guanosine-triphosphate diphosphate + c-di-GMP
Name: guanosine-triphosphate -> diphosphate + c-di-GMP
Description: Reaction transforming guanosine-triphosphate into diphosphate, c-di-GMP
Type: state transition
Pathway Components: guanosine-triphosphate - DgcC - c-di-GMP -> diphosphate + c-di-GMP
Components:
Function Name Type Evidence Reference(s)
catalyzer DgcC protein nd nd
inhibitor c-di-GMP simple_molecule nd nd
product c-di-GMP simple_molecule nd nd
product diphosphate simple_molecule nd nd
reactant guanosine-triphosphate simple_molecule nd nd
yhbTS_mRNA YhbT
Name: yhbTS_mRNA -> YhbT
Description: Translation of YhbT
Type: translation
Pathway Components: yhbTS_mRNA -> YhbT
Components:
Function Name Type Evidence Reference(s)
product YhbT protein nd nd
reactant yhbTS_mRNA RNA nd nd
yhbTS_mRNA YhbS
Name: yhbTS_mRNA -> YhbS
Description: Translation of YhbS
Type: translation
Pathway Components: yhbTS_mRNA -> YhbS
Components:
Function Name Type Evidence Reference(s)
product YhbS protein nd nd
reactant yhbTS_mRNA RNA nd nd
fliAZ-tcyJ_mRNA FliA
Name: fliAZ-tcyJ_mRNA -> FliA
Description: Translation of FliA
Type: translation
Pathway Components: fliAZ-tcyJ_mRNA -> FliA
Components:
Function Name Type Evidence Reference(s)
product FliA protein nd nd
reactant fliAZ-tcyJ_mRNA RNA nd nd
RpoA + RpoC + RpoB + FliA FliA-RpoB-RpoC-RpoA
Name: RpoA + RpoC + RpoB + FliA -> FliA-RpoB-RpoC-RpoA
Description: Reaction transforming RpoA, RpoC, RpoB, FliA into FliA-RpoB-RpoC-RpoA
Type: state transition
Pathway Components: RpoA + RpoC + RpoB + FliA -> FliA-RpoB-RpoC-RpoA
Components:
Function Name Type Evidence Reference(s)
reactant FliA protein nd nd
product FliA-RpoB-RpoC-RpoA complex nd nd
reactant RpoA protein nd nd
reactant RpoB protein nd nd
reactant RpoC protein nd nd
fliAZ-tcyJ_mRNA FliZ
Name: fliAZ-tcyJ_mRNA -> FliZ
Description: Translation of FliZ
Type: translation
Pathway Components: fliAZ-tcyJ_mRNA -> FliZ
Components:
Function Name Type Evidence Reference(s)
product FliZ protein nd nd
reactant fliAZ-tcyJ_mRNA RNA nd nd
fliAZ-tcyJ_mRNA TcyJ
Name: fliAZ-tcyJ_mRNA -> TcyJ
Description: Translation of TcyJ
Type: translation
Pathway Components: fliAZ-tcyJ_mRNA -> TcyJ
Components:
Function Name Type Evidence Reference(s)
product TcyJ protein nd nd
reactant fliAZ-tcyJ_mRNA RNA nd nd
TcyL + TcyJ + TcyN TcyN-TcyL-TcyJ
Name: TcyL + TcyJ + TcyN -> TcyN-TcyL-TcyJ
Description: Reaction transforming TcyL, TcyJ, TcyN into TcyN-TcyL-TcyJ
Type: state transition
Pathway Components: TcyL + TcyJ + TcyN -> TcyN-TcyL-TcyJ
Components:
Function Name Type Evidence Reference(s)
reactant TcyJ protein nd nd
reactant TcyL protein nd nd
reactant TcyN protein nd nd
product TcyN-TcyL-TcyJ complex nd nd
TcyN-TcyL-TcyJ cysteine_Ext cysteine
Name: cysteine_Ext -> cysteine
Description: Transport of cysteine_Ext through a bacterial membrane, leading to the presence of cysteine inside the cell.
Type: transport
Pathway Components: cysteine_Ext - TcyN-TcyL-TcyJ -> cysteine
Components:
Function Name Type Evidence Reference(s)
catalyzer TcyN-TcyL-TcyJ complex nd nd
product cysteine simple_molecule nd nd
reactant cysteine_Ext simple_molecule nd nd
TcyN-TcyL-TcyJ cysteine cystine_Ext cystine
Name: cystine_Ext -> cystine
Description: Transport of cystine_Ext through a bacterial membrane, leading to the presence of cystine inside the cell.
Type: transport
Pathway Components: cystine_Ext - TcyN-TcyL-TcyJ - cysteine -> cystine
Components:
Function Name Type Evidence Reference(s)
catalyzer TcyN-TcyL-TcyJ complex nd nd
inhibitor cysteine simple_molecule nd nd
product cystine simple_molecule nd nd
reactant cystine_Ext simple_molecule nd nd
iraP_mRNA IraP
Name: iraP_mRNA -> IraP
Description: Translation of IraP
Type: translation
Pathway Components: iraP_mRNA -> IraP
Components:
Function Name Type Evidence Reference(s)
product IraP protein nd nd
reactant iraP_mRNA RNA nd nd



RegulonDB