RegulonDB RegulonDB

CaiF Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
gamma-butyrobetaine gamma-butyrobetaine_Ext gamma-butyrobetainyl-CoA CaiA CaiB CaiC CaiD CaiE CaiF CaiT FixA FixB FixC FixX vitamin Bt vitamin Bt_Ext L-carnityl-CoA a reduced electron acceptor an oxidized electron acceptor caiTABCDE caiTABCDE_mRNA CoA crotonobetainyl-CoA PP fixABCX fixABCX_mRNA CaiF vitamin Bt


Gensor Unit       
Name: CaiF
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): GO:1900751 - 4-(trimethylammonio)butanoate transport
GO:0042413 - carnitine catabolic process
GO:0009437 - carnitine metabolic process
GO:0015879 - carnitine transport
GO:0008152 - metabolic process
GO:0055114 - oxidation-reduction process
GO:0006810 - transport
GO:0005737 - cytoplasm
GO:0016021 - integral component of membrane
GO:0016020 - membrane
GO:0005886 - plasma membrane
Read more >
Components:
Function Name Type
RNA fixABCX_mRNA RNA


Reactions       
Showing 12 reactions
caiTABCDE caiTABCDE_mRNA
Name: caiTABCDE -> caiTABCDE_mRNA
Description: Transcription of transcription unit caiTABCDE; reaction activation by CaiF.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant caiTABCDE operon nd nd
product caiTABCDE_mRNA RNA nd nd
fixABCX fixABCX_mRNA
Name: fixABCX -> fixABCX_mRNA
Description: Transcription of transcription unit fixABCX; reaction activation by CaiF.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant fixABCX operon nd nd
product fixABCX_mRNA RNA nd nd
fixABCX_mRNA FixA
Name: fixABCX_mRNA -> FixA
Description: Translation of FixA
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product fixABCX_mRNA RNA nd nd
reactant fixABCX_mRNA RNA nd nd
fixABCX_mRNA FixB
Name: fixABCX_mRNA -> FixB
Description: Translation of FixB
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product fixABCX_mRNA RNA nd nd
reactant fixABCX_mRNA RNA nd nd
fixABCX_mRNA FixC
Name: fixABCX_mRNA -> FixC
Description: Translation of FixC
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product fixABCX_mRNA RNA nd nd
reactant fixABCX_mRNA RNA nd nd
fixABCX_mRNA FixX
Name: fixABCX_mRNA -> FixX
Description: Translation of FixX
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product fixABCX_mRNA RNA nd nd
reactant fixABCX_mRNA RNA nd nd
caiTABCDE_mRNA CaiT
Name: caiTABCDE_mRNA -> CaiT
Description: Translation of CaiT
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product caiTABCDE_mRNA RNA nd nd
reactant caiTABCDE_mRNA RNA nd nd
caiTABCDE_mRNA CaiA
Name: caiTABCDE_mRNA -> CaiA
Description: Translation of CaiA
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product caiTABCDE_mRNA RNA nd nd
reactant caiTABCDE_mRNA RNA nd nd
caiTABCDE_mRNA CaiB
Name: caiTABCDE_mRNA -> CaiB
Description: Translation of CaiB
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product caiTABCDE_mRNA RNA nd nd
reactant caiTABCDE_mRNA RNA nd nd
caiTABCDE_mRNA CaiC
Name: caiTABCDE_mRNA -> CaiC
Description: Translation of CaiC
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product caiTABCDE_mRNA RNA nd nd
reactant caiTABCDE_mRNA RNA nd nd
caiTABCDE_mRNA CaiD
Name: caiTABCDE_mRNA -> CaiD
Description: Translation of CaiD
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product caiTABCDE_mRNA RNA nd nd
reactant caiTABCDE_mRNA RNA nd nd
caiTABCDE_mRNA CaiE
Name: caiTABCDE_mRNA -> CaiE
Description: Translation of CaiE
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product caiTABCDE_mRNA RNA nd nd
reactant caiTABCDE_mRNA RNA nd nd



RegulonDB