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CadC Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
CO2 CadA CadB CadC L-lysine L-lysine_Ext cadBA cadBA_mRNA cadC cadC_mRNA BioDex 1- BioDex 1-_Ext


Gensor Unit       
Name: CadC
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): GO:0003824 - catalytic activity
GO:0016020 - membrane
GO:0005737 - cytoplasm
GO:0016829 - lyase activity
GO:0003333 - amino acid transmembrane transport
GO:0003677 - DNA binding
GO:0008923 - lysine decarboxylase activity
GO:0030170 - pyridoxal phosphate binding
GO:0006520 - cellular amino acid metabolic process
GO:0015297 - antiporter activity
GO:0000156 - phosphorelay response regulator activity
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Components:
Function Name Type
simple molecule BioDex 1-_Ext simple molecule


Reactions       
Showing 8 reactions
cadBA cadBA_mRNA
Name: cadBA -> cadBA_mRNA
Description: Transcription of transcription unit cadBA; reaction activation by CadC.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product cadBA_mRNA RNA nd nd
reactant cadBA gene nd nd
cadC cadC_mRNA
Name: cadC -> cadC_mRNA
Description: Transcription of transcription unit cadC; reaction activation by CadC.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant cadC gene nd nd
product cadC_mRNA RNA nd nd
cadBA_mRNA CadB
Name: cadBA_mRNA -> CadB
Description: Translation of CadB
Type: translation
Components:
Function Name Type Evidence Reference(s)
product CadB protein nd nd
reactant cadBA_mRNA RNA nd nd
BioDex 1-_Ext BioDex 1-
Name: BioDex 1-_Ext -> BioDex 1-
Description: Transport of BioDex 1-_Ext through a bacterial membrane, leading to the presence of BioDex 1- inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product BioDex 1- simple molecule nd nd
reactant BioDex 1-_Ext simple molecule nd nd
BioDex 1-_Ext + L-lysine_Ext BioDex 1- + L-lysine
Name: BioDex 1-_Ext + L-lysine_Ext -> BioDex 1- + L-lysine
Description: Transport of BioDex 1-_Ext, L-lysine_Ext through a bacterial membrane, leading to the presence of BioDex 1-, L-lysine inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant BioDex 1-_Ext simple molecule nd nd
product BioDex 1- simple molecule nd nd
product L-lysine simple molecule nd nd
reactant L-lysine_Ext simple molecule nd nd
cadC_mRNA CadC
Name: cadC_mRNA -> CadC
Description: Translation of CadC
Type: translation
Components:
Function Name Type Evidence Reference(s)
product CadC protein nd nd
reactant cadC_mRNA RNA nd nd
cadBA_mRNA CadA
Name: cadBA_mRNA -> CadA
Description: Translation of CadA
Type: translation
Components:
Function Name Type Evidence Reference(s)
product CadA protein nd nd
reactant cadBA_mRNA RNA nd nd
L-lysine CO2 + BioDex 1-
Name: L-lysine -> CO2 + BioDex 1-
Description: Reaction transforming L-lysine into CO2, BioDex 1-
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product CO2 simple molecule nd nd
reactant L-lysine simple molecule nd nd
product BioDex 1- simple molecule nd nd



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