RegulonDB RegulonDB

BaeR Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
AcrA AcrD BaeR BaeS MdtA MdtB MdtC MdtD phosphate Spy TolC a drug a drug_Ext acrD acrD_mRNA mdtABCD-baeSR mdtABCD-baeSR_mRNA spy spy_mRNA BaeR phosphate AcrD AcrA TolC TolC MdtC MdtB MdtA chenodiol_Ext chenodiol


Gensor Unit       
Name: BaeR
Classification:
Groups: GUs related to the two-component system
Gene Ontology Terms (GO): GO:2001023 - regulation of response to drug
GO:0000986 - bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding
GO:0016020 - membrane
GO:0005887 - integral component of plasma membrane
GO:0004871 - signal transducer activity
GO:0016310 - phosphorylation
GO:0042597 - periplasmic space
GO:0005737 - cytoplasm
GO:2000144 - positive regulation of DNA-templated transcription, initiation
GO:0055085 - transmembrane transport
GO:0000155 - phosphorelay sensor kinase activity
Read more >
Components:
Function Name Type
simple molecule chenodiol_Ext simple molecule


Reactions       
Showing 16 reactions
BaeR + phosphate BaeR-Phosphorylated
Name: BaeR + phosphate -> BaeR-Phosphorylated
Description: Reaction transforming BaeR, phosphate into BaeR-Phosphorylated
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant phosphate simple molecule nd nd
product BaeR-Phosphorylated complex nd nd
reactant BaeR protein nd nd
acrD acrD_mRNA
Name: acrD -> acrD_mRNA
Description: Transcription of transcription unit acrD; reaction activation by BaeR-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product acrD_mRNA RNA nd nd
reactant acrD gene nd nd
mdtABCD-baeSR mdtABCD-baeSR_mRNA
Name: mdtABCD-baeSR -> mdtABCD-baeSR_mRNA
Description: Transcription of transcription unit mdtABCD-baeSR; reaction activation by BaeR-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant mdtABCD-baeSR gene nd nd
product mdtABCD-baeSR_mRNA RNA nd nd
spy spy_mRNA
Name: spy -> spy_mRNA
Description: Transcription of transcription unit spy; reaction activation by BaeR-Phosphorylated.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product spy_mRNA RNA nd nd
reactant spy gene nd nd
spy_mRNA Spy
Name: spy_mRNA -> Spy
Description: Translation of Spy
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant spy_mRNA RNA nd nd
product Spy protein nd nd
mdtABCD-baeSR_mRNA BaeR
Name: mdtABCD-baeSR_mRNA -> BaeR
Description: Translation of BaeR
Type: translation
Components:
Function Name Type Evidence Reference(s)
product BaeR protein nd nd
reactant mdtABCD-baeSR_mRNA RNA nd nd
mdtABCD-baeSR_mRNA BaeS
Name: mdtABCD-baeSR_mRNA -> BaeS
Description: Translation of BaeS
Type: translation
Components:
Function Name Type Evidence Reference(s)
product BaeS protein nd nd
reactant mdtABCD-baeSR_mRNA RNA nd nd
acrD_mRNA AcrD
Name: acrD_mRNA -> AcrD
Description: Translation of AcrD
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant acrD_mRNA RNA nd nd
product AcrD protein nd nd
AcrD + AcrA + TolC AcrD-AcrA-TolC
Name: AcrD + AcrA + TolC -> AcrD-AcrA-TolC
Description: Reaction transforming AcrD, AcrA, TolC into AcrD-AcrA-TolC
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant TolC protein nd nd
product AcrD-AcrA-TolC complex nd nd
reactant AcrD protein nd nd
reactant AcrA protein nd nd
a drug_Ext a drug
Name: a drug_Ext -> a drug
Description: Transport of a drug_Ext through a bacterial membrane, leading to the presence of a drug inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
product a drug simple molecule nd nd
reactant a drug_Ext simple molecule nd nd
mdtABCD-baeSR_mRNA MdtC
Name: mdtABCD-baeSR_mRNA -> MdtC
Description: Translation of MdtC
Type: translation
Components:
Function Name Type Evidence Reference(s)
product MdtC protein nd nd
reactant mdtABCD-baeSR_mRNA RNA nd nd
TolC + MdtC + MdtB + MdtA TolC-MdtC-MdtB-MdtA
Name: TolC + MdtC + MdtB + MdtA -> TolC-MdtC-MdtB-MdtA
Description: Reaction transforming TolC, MdtC, MdtB, MdtA into TolC-MdtC-MdtB-MdtA
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant MdtB protein nd nd
reactant TolC protein nd nd
reactant MdtC protein nd nd
reactant MdtA protein nd nd
product TolC-MdtC-MdtB-MdtA complex nd nd
mdtABCD-baeSR_mRNA MdtB
Name: mdtABCD-baeSR_mRNA -> MdtB
Description: Translation of MdtB
Type: translation
Components:
Function Name Type Evidence Reference(s)
product MdtB protein nd nd
reactant mdtABCD-baeSR_mRNA RNA nd nd
mdtABCD-baeSR_mRNA MdtA
Name: mdtABCD-baeSR_mRNA -> MdtA
Description: Translation of MdtA
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant mdtABCD-baeSR_mRNA RNA nd nd
product MdtA protein nd nd
mdtABCD-baeSR_mRNA MdtD
Name: mdtABCD-baeSR_mRNA -> MdtD
Description: Translation of MdtD
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant mdtABCD-baeSR_mRNA RNA nd nd
product MdtD protein nd nd
chenodiol_Ext chenodiol
Name: chenodiol_Ext -> chenodiol
Description: Transport of chenodiol_Ext through a bacterial membrane, leading to the presence of chenodiol inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant chenodiol_Ext simple molecule nd nd
product chenodiol simple molecule nd nd



RegulonDB