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AtoC Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
phosphate acetyl-CoA AtoE acetoacetyl-CoA atoDAEB acetate oxobutyrate coenzyme A AtoD AtoA phosphate atoDAEB_mRNA AtoC AtoC AtoA oxobutyrate_Ext AtoD AtoB


Gensor Unit       
Name: AtoC
Signal name: acetoacetato
spermidine.
Classification:
Groups: Lipid transport and metabolism
Gene Ontology Terms (GO): biological_process GO:0043442 - acetoacetic acid catabolic process
GO:0006635 - fatty acid beta-oxidation
GO:0006631 - fatty acid metabolic process
GO:0019395 - fatty acid oxidation
GO:0006629 - lipid metabolic process
GO:0008152 - metabolic process
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cellular_component GO:0005737 - cytoplasm
GO:0005829 - cytosol
GO:0016021 - integral component of membrane
GO:0016020 - membrane
GO:0005886 - plasma membrane
molecular_function GO:0008410 - CoA-transferase activity
GO:0008775 - acetate CoA-transferase activity
GO:0003985 - acetyl-CoA C-acetyltransferase activity
GO:0003988 - acetyl-CoA C-acyltransferase activity
GO:0003824 - catalytic activity
GO:0042802 - identical protein binding
GO:0005515 - protein binding
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Components:
  Function Name Type
  protein AtoA protein
  complex AtoA-AtoD complex
  protein AtoB protein
  protein AtoC protein
  complex AtoC-phosphate complex
  protein AtoD protein
  protein AtoE protein
  simple_molecule acetate simple_molecule
  simple_molecule acetoacetyl-CoA simple_molecule
  simple_molecule acetyl-CoA simple_molecule
  gene atoDAEB gene
  RNA atoDAEB_mRNA RNA
  simple_molecule coenzyme A simple_molecule
  simple_molecule oxobutyrate simple_molecule
  simple_molecule oxobutyrate_Ext simple_molecule
  simple_molecule phosphate simple_molecule


Reactions       
Showing 10 reactions
phosphate + AtoC AtoC-phosphate
Name: phosphate + AtoC -> AtoC-phosphate
Description: Reaction transforming phosphate, AtoC into AtoC-phosphate
Type: state transition
Pathway Components: phosphate + AtoC -> AtoC-phosphate
Components:
Function Name Type
reactant AtoC protein
product AtoC-phosphate complex
reactant phosphate simple_molecule
AtoC-phosphate atoDAEB atoDAEB_mRNA
Name: atoDAEB -> atoDAEB_mRNA
Description: Transcription of transcription unit atoDAEB. Reaction activation by AtoC-phosphate.
Type: transcription
Pathway Components: atoDAEB - AtoC-phosphate -> atoDAEB_mRNA
Components:
Function Name Type
activator AtoC-phosphate complex
reactant atoDAEB gene
product atoDAEB_mRNA RNA
atoDAEB_mRNA AtoD
Name: atoDAEB_mRNA -> AtoD
Description: Translation of AtoD
Type: translation
Pathway Components: atoDAEB_mRNA -> AtoD
Components:
Function Name Type
product AtoD protein
reactant atoDAEB_mRNA RNA
AtoA + AtoD AtoA-AtoD
Name: AtoA + AtoD -> AtoA-AtoD
Description: Reaction transforming AtoA, AtoD into AtoA-AtoD
Type: state transition
Pathway Components: AtoA + AtoD -> AtoA-AtoD
Components:
Function Name Type
reactant AtoA protein
product AtoA-AtoD complex
reactant AtoD protein
AtoA-AtoD acetyl-CoA coenzyme A oxobutyrate + acetyl-CoA acetoacetyl-CoA + acetate
Name: oxobutyrate + acetyl-CoA -> acetoacetyl-CoA + acetate
Description: Reaction transforming oxobutyrate, acetyl-CoA into acetoacetyl-CoA, acetate
Type: state transition
Pathway Components: oxobutyrate + acetyl-CoA - AtoA-AtoD - acetyl-CoA - coenzyme A -> acetoacetyl-CoA + acetate
Components:
Function Name Type
catalyzer AtoA-AtoD complex
product acetate simple_molecule
product acetoacetyl-CoA simple_molecule
inhibitor acetyl-CoA simple_molecule
reactant acetyl-CoA simple_molecule
inhibitor coenzyme A simple_molecule
reactant oxobutyrate simple_molecule
atoDAEB_mRNA AtoA
Name: atoDAEB_mRNA -> AtoA
Description: Translation of AtoA
Type: translation
Pathway Components: atoDAEB_mRNA -> AtoA
Components:
Function Name Type
product AtoA protein
reactant atoDAEB_mRNA RNA
atoDAEB_mRNA AtoE
Name: atoDAEB_mRNA -> AtoE
Description: Translation of AtoE
Type: translation
Pathway Components: atoDAEB_mRNA -> AtoE
Components:
Function Name Type
product AtoE protein
reactant atoDAEB_mRNA RNA
AtoE oxobutyrate_Ext oxobutyrate
Name: oxobutyrate_Ext -> oxobutyrate
Description: Transport of oxobutyrate_Ext through a bacterial membrane, leading to the presence of oxobutyrate inside the cell.
Type: transport
Pathway Components: oxobutyrate_Ext - AtoE -> oxobutyrate
Components:
Function Name Type
catalyzer AtoE protein
product oxobutyrate simple_molecule
reactant oxobutyrate_Ext simple_molecule
atoDAEB_mRNA AtoB
Name: atoDAEB_mRNA -> AtoB
Description: Translation of AtoB
Type: translation
Pathway Components: atoDAEB_mRNA -> AtoB
Components:
Function Name Type
product AtoB protein
reactant atoDAEB_mRNA RNA
AtoB acetoacetyl-CoA acetyl-CoA acetoacetyl-CoA + coenzyme A
Name: acetyl-CoA -> acetoacetyl-CoA + coenzyme A
Description: Reaction transforming acetyl-CoA into acetoacetyl-CoA, coenzyme A
Type: state transition
Pathway Components: acetyl-CoA - AtoB - acetoacetyl-CoA -> acetoacetyl-CoA + coenzyme A
Components:
Function Name Type
catalyzer AtoB protein
inhibitor acetoacetyl-CoA simple_molecule
product acetoacetyl-CoA simple_molecule
reactant acetyl-CoA simple_molecule
product coenzyme A simple_molecule



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