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AdiY Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          


Gensor Unit       
Name: AdiY
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): GO:0003700 - transcription factor activity, sequence-specific DNA binding
GO:0003824 - catalytic activity
GO:0008652 - cellular amino acid biosynthetic process
GO:0016020 - membrane
GO:0016491 - oxidoreductase activity
GO:0019752 - carboxylic acid metabolic process
GO:0006537 - glutamate biosynthetic process
GO:0005737 - cytoplasm
GO:0004355 - glutamate synthase (NADPH) activity
GO:0016829 - lyase activity
GO:0051538 - 3 iron, 4 sulfur cluster binding
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Components:
Function Name Type
RNA gltBDF_mRNA RNA


Reactions       
Showing 19 reactions
adiA adiA_mRNA
Name: adiA -> adiA_mRNA
Description: Transcription of transcription unit adiA; reaction activation by AdiY.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
product adiA_mRNA RNA nd nd
reactant adiA gene nd nd
gadAX gadAX_mRNA
Name: gadAX -> gadAX_mRNA
Description: Transcription of transcription unit gadAX; reaction activation by AdiY.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant gadAX gene nd nd
product gadAX_mRNA RNA nd nd
gadBC gadBC_mRNA
Name: gadBC -> gadBC_mRNA
Description: Transcription of transcription unit gadBC; reaction activation by AdiY.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant gadBC gene nd nd
product gadBC_mRNA RNA nd nd
gltBDF gltBDF_mRNA
Name: gltBDF -> gltBDF_mRNA
Description: Transcription of transcription unit gltBDF; reaction activation by AdiY.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant gltBDF gene nd nd
product gltBDF_mRNA RNA nd nd
gadBC_mRNA GadC
Name: gadBC_mRNA -> GadC
Description: Translation of GadC
Type: translation
Components:
Function Name Type Evidence Reference(s)
product GadC protein nd nd
reactant gadBC_mRNA RNA nd nd
GABA_Ext + L-glutamate_Ext L-glutamate + GABA
Name: GABA_Ext + L-glutamate_Ext -> L-glutamate + GABA
Description: Transport of GABA_Ext, L-glutamate_Ext through a bacterial membrane, leading to the presence of L-glutamate, GABA inside the compartment.
Type: transport
Components:
Function Name Type Evidence Reference(s)
reactant GABA_Ext simple molecule nd nd
product GABA simple molecule nd nd
product L-glutamate simple molecule nd nd
reactant L-glutamate_Ext simple molecule nd nd
gadBC_mRNA GadB
Name: gadBC_mRNA -> GadB
Description: Translation of GadB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant gadBC_mRNA RNA nd nd
product GadB protein nd nd
L-glutamate CO2 + GABA
Name: L-glutamate -> CO2 + GABA
Description: Reaction transforming L-glutamate into CO2, GABA
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product CO2 simple molecule nd nd
product GABA simple molecule nd nd
reactant L-glutamate simple molecule nd nd
gadAX_mRNA GadX
Name: gadAX_mRNA -> GadX
Description: Translation of GadX
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant gadAX_mRNA RNA nd nd
product GadX protein nd nd
adiA_mRNA AdiA
Name: adiA_mRNA -> AdiA
Description: Translation of AdiA
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant adiA_mRNA RNA nd nd
product AdiA protein nd nd
L-arginine CO2 + agmatine
Name: L-arginine -> CO2 + agmatine
Description: Reaction transforming L-arginine into CO2, agmatine
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant L-arginine simple molecule nd nd
product CO2 simple molecule nd nd
product agmatine simple molecule nd nd
gltBDF_mRNA GltD
Name: gltBDF_mRNA -> GltD
Description: Translation of GltD
Type: translation
Components:
Function Name Type Evidence Reference(s)
product GltD protein nd nd
reactant gltBDF_mRNA RNA nd nd
GltB + GltD GltB-GltD
Name: GltB + GltD -> GltB-GltD
Description: Reaction transforming GltB, GltD into GltB-GltD
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant GltB protein nd nd
product GltB-GltD complex nd nd
reactant GltD protein nd nd
L-glutamate L-glutamine + ketoglutarate
Name: L-glutamate -> L-glutamine + ketoglutarate
Description: Reaction transforming L-glutamate into L-glutamine, ketoglutarate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product L-glutamine simple molecule nd nd
product ketoglutarate simple molecule nd nd
reactant L-glutamate simple molecule nd nd
L-glutamine L-glutamate + ammonia
Name: L-glutamine -> L-glutamate + ammonia
Description: Reaction transforming L-glutamine into L-glutamate, ammonia
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product L-glutamate simple molecule nd nd
reactant L-glutamine simple molecule nd nd
product ammonia simple molecule nd nd
L-glutamate ketoglutarate + ammonia
Name: L-glutamate -> ketoglutarate + ammonia
Description: Reaction transforming L-glutamate into ketoglutarate, ammonia
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant L-glutamate simple molecule nd nd
product ketoglutarate simple molecule nd nd
product ammonia simple molecule nd nd
gltBDF_mRNA GltF
Name: gltBDF_mRNA -> GltF
Description: Translation of GltF
Type: translation
Components:
Function Name Type Evidence Reference(s)
product GltF protein nd nd
reactant gltBDF_mRNA RNA nd nd
gadAX_mRNA GadA
Name: gadAX_mRNA -> GadA
Description: Translation of GadA
Type: translation
Components:
Function Name Type Evidence Reference(s)
product GadA protein nd nd
reactant gadAX_mRNA RNA nd nd
gltBDF_mRNA GltB
Name: gltBDF_mRNA -> GltB
Description: Translation of GltB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant gltBDF_mRNA RNA nd nd
product GltB protein nd nd



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