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AgaR Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
AgaA AgaB AgaC AgaD AgaI AgaR AgaS AgaV AgaW D-glyceraldehyde 3-phosphate KbaY KbaZ agaR agaR_mRNA agaS-kbaY-agaBCDI agaS-kbaY-agaBCDI_mRNA DHAP kbaZ-agaVWA kbaZ-agaVWA_mRNA tagatose-1,6-bisphosphate KbaY KbaZ


Gensor Unit       
Name: AgaR
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): GO:0009025 - tagatose-bisphosphate aldolase activity
GO:0008270 - zinc ion binding
GO:0003700 - transcription factor activity, sequence-specific DNA binding
GO:0016861 - intramolecular oxidoreductase activity, interconverting aldoses and ketoses
GO:0016020 - membrane
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system
GO:0005622 - intracellular
GO:0003824 - catalytic activity
GO:0043877 - galactosamine-6-phosphate isomerase activity
GO:0016310 - phosphorylation
GO:0016829 - lyase activity
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Components:
Function Name Type
simple molecule tagatose-1,6-bisphosphate simple molecule


Reactions       
Showing 16 reactions
agaR agaR_mRNA
Name: agaR -> agaR_mRNA
Description: Transcription of transcription unit agaR; reaction inhibition by AgaR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant agaR gene nd nd
product agaR_mRNA RNA nd nd
agaS-kbaY-agaBCDI agaS-kbaY-agaBCDI_mRNA
Name: agaS-kbaY-agaBCDI -> agaS-kbaY-agaBCDI_mRNA
Description: Transcription of transcription unit agaS-kbaY-agaBCDI; reaction inhibition by AgaR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant agaS-kbaY-agaBCDI gene nd nd
product agaS-kbaY-agaBCDI_mRNA RNA nd nd
kbaZ-agaVWA kbaZ-agaVWA_mRNA
Name: kbaZ-agaVWA -> kbaZ-agaVWA_mRNA
Description: Transcription of transcription unit kbaZ-agaVWA; reaction inhibition by AgaR.
Type: transcription
Components:
Function Name Type Evidence Reference(s)
reactant kbaZ-agaVWA gene nd nd
product kbaZ-agaVWA_mRNA RNA nd nd
agaS-kbaY-agaBCDI_mRNA AgaD
Name: agaS-kbaY-agaBCDI_mRNA -> AgaD
Description: Translation of AgaD
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant agaS-kbaY-agaBCDI_mRNA RNA nd nd
product AgaD protein nd nd
agaS-kbaY-agaBCDI_mRNA AgaS
Name: agaS-kbaY-agaBCDI_mRNA -> AgaS
Description: Translation of AgaS
Type: translation
Components:
Function Name Type Evidence Reference(s)
product AgaS protein nd nd
reactant agaS-kbaY-agaBCDI_mRNA RNA nd nd
kbaZ-agaVWA_mRNA AgaA
Name: kbaZ-agaVWA_mRNA -> AgaA
Description: Translation of AgaA
Type: translation
Components:
Function Name Type Evidence Reference(s)
product AgaA protein nd nd
reactant kbaZ-agaVWA_mRNA RNA nd nd
agaS-kbaY-agaBCDI_mRNA AgaB
Name: agaS-kbaY-agaBCDI_mRNA -> AgaB
Description: Translation of AgaB
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant agaS-kbaY-agaBCDI_mRNA RNA nd nd
product AgaB protein nd nd
kbaZ-agaVWA_mRNA KbaZ
Name: kbaZ-agaVWA_mRNA -> KbaZ
Description: Translation of KbaZ
Type: translation
Components:
Function Name Type Evidence Reference(s)
product KbaZ protein nd nd
reactant kbaZ-agaVWA_mRNA RNA nd nd
KbaY + KbaZ KbaY-KbaZ
Name: KbaY + KbaZ -> KbaY-KbaZ
Description: Reaction transforming KbaY, KbaZ into KbaY-KbaZ
Type: state transition
Components:
Function Name Type Evidence Reference(s)
reactant KbaY protein nd nd
product KbaY-KbaZ complex nd nd
reactant KbaZ protein nd nd
tagatose-1,6-bisphosphate DHAP + D-glyceraldehyde 3-phosphate
Name: tagatose-1,6-bisphosphate -> DHAP + D-glyceraldehyde 3-phosphate
Description: Reaction transforming tagatose-1,6-bisphosphate into DHAP, D-glyceraldehyde 3-phosphate
Type: state transition
Components:
Function Name Type Evidence Reference(s)
product D-glyceraldehyde 3-phosphate simple molecule nd nd
product DHAP simple molecule nd nd
reactant tagatose-1,6-bisphosphate simple molecule nd nd
kbaZ-agaVWA_mRNA AgaV
Name: kbaZ-agaVWA_mRNA -> AgaV
Description: Translation of AgaV
Type: translation
Components:
Function Name Type Evidence Reference(s)
product AgaV protein nd nd
reactant kbaZ-agaVWA_mRNA RNA nd nd
agaS-kbaY-agaBCDI_mRNA KbaY
Name: agaS-kbaY-agaBCDI_mRNA -> KbaY
Description: Translation of KbaY
Type: translation
Components:
Function Name Type Evidence Reference(s)
product KbaY protein nd nd
reactant agaS-kbaY-agaBCDI_mRNA RNA nd nd
agaS-kbaY-agaBCDI_mRNA AgaI
Name: agaS-kbaY-agaBCDI_mRNA -> AgaI
Description: Translation of AgaI
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant agaS-kbaY-agaBCDI_mRNA RNA nd nd
product AgaI protein nd nd
agaS-kbaY-agaBCDI_mRNA AgaC
Name: agaS-kbaY-agaBCDI_mRNA -> AgaC
Description: Translation of AgaC
Type: translation
Components:
Function Name Type Evidence Reference(s)
product AgaC protein nd nd
reactant agaS-kbaY-agaBCDI_mRNA RNA nd nd
kbaZ-agaVWA_mRNA AgaW
Name: kbaZ-agaVWA_mRNA -> AgaW
Description: Translation of AgaW
Type: translation
Components:
Function Name Type Evidence Reference(s)
product AgaW protein nd nd
reactant kbaZ-agaVWA_mRNA RNA nd nd
agaR_mRNA AgaR
Name: agaR_mRNA -> AgaR
Description: Translation of AgaR
Type: translation
Components:
Function Name Type Evidence Reference(s)
reactant agaR_mRNA RNA nd nd
product AgaR protein nd nd



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