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AidB Genetic Sensory Response Unit in Escherichia coli K-12 genome


Gensor Unit Map          
AidB aidB aidB_mRNA


Gensor Unit       
Name: AidB
Classification:
Groups: Unclassified Gensor Units
Gene Ontology Terms (GO): biological_process GO:0006974 - cellular response to DNA damage stimulus
GO:0045892 - negative regulation of transcription, DNA-templated
molecular_function GO:0003677 - DNA binding
GO:0008470 - isovaleryl-CoA dehydrogenase activity
GO:0005515 - protein binding
GO:0043565 - sequence-specific DNA binding
Components:
Function Name Type
simple_molecule 3-methylcrotonyl-CoA simple_molecule
protein AidB protein
gene aidB gene
RNA aidB_mRNA RNA
simple_molecule isovaleryl-CoA simple_molecule
simple_molecule oxidized ETF simple_molecule
simple_molecule reduced ETF simple_molecule


Reactions       
Showing 3 reactions
AidB aidB aidB_mRNA
Name: aidB -> aidB_mRNA
Description: Transcription of transcription unit aidB. Reaction inhibition by AidB.
Type: transcription
Pathway Components: aidB - AidB -> aidB_mRNA
Components:
Function Name Type Evidence Reference(s)
inhibitor AidB protein nd nd
reactant aidB gene nd nd
product aidB_mRNA RNA nd nd
aidB_mRNA AidB
Name: aidB_mRNA -> AidB
Description: Translation of AidB
Type: translation
Pathway Components: aidB_mRNA -> AidB
Components:
Function Name Type Evidence Reference(s)
product AidB protein nd nd
reactant aidB_mRNA RNA nd nd
AidB isovaleryl-CoA + oxidized ETF 3-methylcrotonyl-CoA + reduced ETF
Name: isovaleryl-CoA + oxidized ETF -> 3-methylcrotonyl-CoA + reduced ETF
Description: Reaction transforming isovaleryl-CoA, oxidized ETF into 3-methylcrotonyl-CoA, reduced ETF
Type: state transition
Pathway Components: isovaleryl-CoA + oxidized ETF - AidB -> 3-methylcrotonyl-CoA + reduced ETF
Components:
Function Name Type Evidence Reference(s)
product 3-methylcrotonyl-CoA simple_molecule nd nd
catalyzer AidB protein nd nd
reactant isovaleryl-CoA simple_molecule nd nd
reactant oxidized ETF simple_molecule nd nd
product reduced ETF simple_molecule nd nd



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