RegulonDB RegulonDB 10.0: Downloadable High-throughput datasets

Downloadable High-throughput datasets


Our curation is focused on identifying the objects (sites, promoters, interactions) that satisfy a set of criteria regarding confidence and interpretability, in order to upload them in RegulonDB together with all existing knowledge. When these criteria are not satisfied, then we simply offer the data as datasets. This page contains the catalog of the HT datasets.




  ID Type Name|Title TF Effect Regulated Object TFBS left position TFBS right position DNA sequence Method Reference
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd cspD 921418 921817 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd grxB 1122395 1122869 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd gdhA 1839906 1840284 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd yeaE 1863117 1863482 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd rrsB, gltT, rrlB, rrfB 4164085 4164380 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd gltP 4292243 4292675 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd hypE, fhlA 2850564 2850922 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd argA 2946958 2947262 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd araC 70013 70400 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd tolB, pal, ybgF 776129 776611 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd 1479985 1480421 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd 1497810 1498218 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd pinQ 1631258 1631540 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd fumA 1686391 1686790 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd dedA 2432680 2433142 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd yfiN, yfiB 2740498 2740881 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd 3483178 3483615 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd dtpB 3637606 3640084 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd gadW 3661652 3662770 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd ldhA 1440584 1441025 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd yadM, htrE 155307 155636 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd djlB 676968 677362 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd mdoC 1107526 1107962 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd galU 1290829 1291116 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd cysB 1331452 1332000 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd yciT, yciZ 1342605 1342873 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd ydbH, ynbE, ydbL 1440584 1441025 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd pheL, pheA 2735344 2735689 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd ilvL, ilvX, ilvG_1, ilvG_2, ilvM, ilvE, ilvD, ilvA 3948227 3948898 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd wzzE, rffE, rffD, rffG, rffH, rffC, rffA, wzxE, rffT, wzyE, rffM 3967458 3967861 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd yjgF 4468856 4469238 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd manA 1686391 1686790 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd rrsH, ileV, alaV, rrlH, rrfH 223124 223460 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd ykgL 310041 311944 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd cynT, cynS, cynX 358843 359184 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd ddlA 399900 400241 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd lnt, ybeX 690593 690925 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd glnX, glnV, metU, glnW, glnU, leuW, metT 696367 696873 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd lrp 931326 931666 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd sulA 1020381 1020821 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd ymgF 1218021 1218475 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd kdsA 1267062 1267598 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd pinR 1431787 1432062 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd ydcL 1500396 1500748 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd adhP 1550905 1551324 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd ydeM, ydeN 1580623 1580954 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd ynfG, ynfH, dmsD 1659558 1659869 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd pntB, pntA 1676039 1676344 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd ydgH 1677181 1677613 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd slyA 1718946 1719291 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd yedI 2026325 2026664 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd C0719 3118966 3119335 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd sstT 3237624 3238040 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd yicI, yicJ 3833235 3833655 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd ysdC, glvG 3859796 3860370 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd yjgH 4471256 4471601 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp induce adhE 1298191 1298921 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd rzpR 1420890 1421202 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd eutR, eutK, eutL, eutC, eutB 2556143 2556513 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd yheL, yheM, yheN, yheO 3474487 3474906 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd uhpC, uhpB, uhpA, ilvN, ilvB 3851200 3852545 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd thiH, thiG, thiS, thiF, thiE, thiC 4194216 4194686 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd yjjP 4600428 4600740 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd deoB, deoD 4617132 4617548 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd ygaW 2795802 2797947 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd yagU 302307 302743 nd nd 19052235
  HTRI00000007 TF Microarray-Lrp-19052235 Lrp nd sbcC, sbcD 413894 414318 nd nd 19052235


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