RegulonDB RegulonDB 10.0: Downloadable High-throughput datasets

Downloadable High-throughput datasets


Our curation is focused on identifying the objects (sites, promoters, interactions) that satisfy a set of criteria regarding confidence and interpretability, in order to upload them in RegulonDB together with all existing knowledge. When these criteria are not satisfied, then we simply offer the data as datasets. This page contains the catalog of the HT datasets.




  ID Type Name|Title TF Effect Regulated Object TFBS left position TFBS right position DNA sequence Method Reference
  HTRI00000082 TF gSELEX-DpiA-18997424 DpiA nd b2655 2785103 2785235 nd nd 18997424
  HTRI00000082 TF gSELEX-DpiA-18997424 DpiA nd mdh 3384236 3384307 nd nd 18997424
  HTRI00000082 TF gSELEX-DpiA-18997424 DpiA nd yjiR 4576451 4576653 nd nd 18997424
  HTRI00000082 TF gSELEX-DpiA-18997424 DpiA nd yjiT 4576451 4576653 nd nd 18997424
  HTRI00000082 TF gSELEX-DpiA-18997424 DpiA nd carA 29239 29406 nd nd 18997424
  HTRI00000082 TF gSELEX-DpiA-18997424 DpiA nd yeiC 2262814 2262979 nd nd 18997424
  HTRI00000082 TF gSELEX-DpiA-18997424 DpiA nd ycjK 1362765 1362840 nd nd 18997424
  HTRI00000082 TF gSELEX-DpiA-18997424 DpiA nd srmB 2710941 2711173 nd nd 18997424
  HTRI00000082 TF gSELEX-DpiA-18997424 DpiA nd b2653 2785103 2785235 nd nd 18997424
  HTRI00000082 TF gSELEX-DpiA-18997424 DpiA nd argR 3384236 3384307 nd nd 18997424
  HTRI00000082 TF gSELEX-DpiA-18997424 DpiA nd uxaC 3243452 3243598 nd nd 18997424
  HTRI00000082 TF gSELEX-DpiA-18997424 DpiA nd exuT 3243452 3243598 nd nd 18997424
  HTRI00000082 TF gSELEX-DpiA-18997424 DpiA nd citC 651209 651437 nd nd 18997424
  HTRI00000082 TF gSELEX-DpiA-18997424 DpiA nd citA 651209 651437 nd nd 18997424
  HTRI00000082 TF gSELEX-DpiA-18997424 DpiA nd ycjL 1362765 1362840 nd nd 18997424


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