RegulonDB RegulonDB 10.0: Downloadable High-throughput datasets

Downloadable High-throughput datasets


Our curation is focused on identifying the objects (sites, promoters, interactions) that satisfy a set of criteria regarding confidence and interpretability, in order to upload them in RegulonDB together with all existing knowledge. When these criteria are not satisfied, then we simply offer the data as datasets. This page contains the catalog of the HT datasets.




  ID Type Name|Title TF Effect Regulated Object TFBS left position TFBS right position DNA sequence Method Reference
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR induce ackA nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd dbpA nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd hsdR nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd hybO nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd nohB nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd slyA nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR induce upp nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR induce uxaC nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd yciC nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd ydcX nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd ydfO nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd ydiP nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd yeeH nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd yffL nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd yhbU nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd yjbI nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd guaB nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR induce ompW nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR induce pitA nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd ydhI nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd yffS nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd yghB nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd yhaB nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd yhcC nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd yhiN nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd mrr nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd trkD nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd yccF nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd ydaA nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd ydiQ nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd yfbV nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd yfcC nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd yhbT nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd yieN nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd ynfK nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd aegA nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR repress gltB nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd narQ nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR repress purM nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd pykA nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd slyB nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd xseA nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd ybcW nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd ydfZ nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd yoeA nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd exuT nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd helD nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd nohA nd nd nd nd 17164287
  HTRI00000088 TF CHIP-SV-FNR-17164287 FNR nd ydhH nd nd nd nd 17164287


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