RegulonDB RegulonDB 10.0: Downloadable High-throughput datasets

Downloadable High-throughput datasets


Our curation is focused on identifying the objects (sites, promoters, interactions) that satisfy a set of criteria regarding confidence and interpretability, in order to upload them in RegulonDB together with all existing knowledge. When these criteria are not satisfied, then we simply offer the data as datasets. This page contains the catalog of the HT datasets.




  ID Type Name|Title TF Effect Regulated Object TFBS left position TFBS right position DNA sequence Method Reference
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yjjP nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ecpD, htrE nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yeaJ nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd argA nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd mntH nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ypjI nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yjhC nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd rhsD, ybbC, ylbH, ybbD nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd hscC nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd rhsC, ybfB nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ycaL nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yoaC nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd sdiA nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yehDCBA nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd xapR nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yraH nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yraQ nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd gltF nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yhdV nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd frvABXR nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yjcS nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd adiA nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd cadC nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd fimAICDFGH nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yaaI nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd leuLABCD nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd leuO nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd pdhR nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ybaY nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd nmpC nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd micC nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd uvrYC nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yegJ nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yfbK nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yfbN nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd treF nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd glpFKX nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ybfA nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ycbQ nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ompN nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yedD nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd alpA nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd uxaCA nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd exuT nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd tdcABCDEFG nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd tdcR nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd pitA nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd rfaDFCL nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yicJI nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd glmZ nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yiiU nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ydiE nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yedS nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd cld nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yohF nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd nuoCEFGHIJKLMN nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ygeK nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd cmtBA, yggPFDC nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd insA nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yiaY nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yibU nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yigF nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yiiG nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd sdsRQP nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yjiT nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd essD, ybcS, rzpD nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ybdR nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd dpiBA nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yagI nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd insE nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ynfGH, dmsD nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd tfaS nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd mipA nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd xdhBC nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd tsr nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yfjV nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd insG nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd cyoABCDE nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd fepE nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ybdN nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ybdO nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ybgD nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ydfAB, rzpQ nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd eco nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yfgHI nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yqeIJ nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ygiL nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yhaI nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd garK, rnpB nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yidP nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yihF nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yjfIJ nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd dnaK, tpke11, dnaJ nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd aroP nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd tauABCD nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd hemB nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yaiT nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ybeR nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd kdpFABC nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ftnB nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yedEF nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yegI nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yfbL nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yghT nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd gspCDEFGHIJKLMO nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yjiC nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd iraD nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yjiY nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd adhP nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yjcS nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd aqpZ nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ssuEADCB nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd araFGH nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yecF nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yfbO nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yfjH nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd exuT nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yhiN nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yhjA nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yhjB nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yhjC nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd htrL nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ade nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yjgM nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yrhB nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yiaB nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yiiE nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yaiS nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd tesB nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd uspG nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd citCDEFXG nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ybeQ nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ybeT nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd fabZ, lpxAB, rnhB, dnaE nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yafT nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd tig nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ybcLM nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd cydAB nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ydbA nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd psuKG nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd casABCDE12 nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yjgN nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yjjQ, bglJ nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ybhH nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ompG nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd blr nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd wcaEF, gmd, fcl, gmm, wcaI, cpsBG, wcaJ, wzxC nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yeaH nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd insL nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ygeR nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd nfrB nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd rhsC, ybfB nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ybhM nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ycjU nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd rhsE, ydcD nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd torYZ nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yfcV nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd sdaCB nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd pitB nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ybjD nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ruvAB nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yebB nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yfgF nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yfgG nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yghSR nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd uxaC nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd envR nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd acrEF nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd gspAB nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd selC nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yicO nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd aslA nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd chiA nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yhfL nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yhhZ, yrhA, insA, 6AB, 6B, 6 nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd gadE, mdtEF nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yhjX nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd bglGFB nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yihTS nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ubiC nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd yjeJ nd nd nd nd 21883529
  HTRI00000177 TF gSELEX-LeuO-21883529 LeuO nd ybeU, djlC nd nd nd nd 21883529


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