RegulonDB RegulonDB 10.0: Downloadable High-throughput datasets

Downloadable High-throughput datasets


Our curation is focused on identifying the objects (sites, promoters, interactions) that satisfy a set of criteria regarding confidence and interpretability, in order to upload them in RegulonDB together with all existing knowledge. When these criteria are not satisfied, then we simply offer the data as datasets. This page contains the catalog of the HT datasets.




  ID Type Name|Title TF Effect Regulated Object TFBS left position TFBS right position DNA sequence Method Reference
  HTRI00000180 TF CHIP-SV, MSI-GadE-26258987 GadE induce yhiM 3632675 3632700 nd nd 26258987
  HTRI00000180 TF CHIP-SV, MSI-GadE-26258987 GadE nd cnu 1702759 1702787 nd nd 26258987
  HTRI00000180 TF CHIP-SV, MSI-GadE-26258987 GadE induce hdeD 3654915 3654943 nd nd 26258987
  HTRI00000180 TF CHIP-SV, MSI-GadE-26258987 GadE nd gadE 3656193 3656227 nd nd 26258987
  HTRI00000180 TF CHIP-SV, MSI-GadE-26258987 GadE induce hdeAB-yhiD 3654789 3654820 nd nd 26258987
  HTRI00000180 TF CHIP-SV, MSI-GadE-26258987 GadE nd yjtD 4638752 4638780 nd nd 26258987
  HTRI00000180 TF CHIP-SV, MSI-GadE-26258987 GadE induce gadA 3665681 3665709 nd nd 26258987
  HTRI00000180 TF CHIP-SV, MSI-GadE-26258987 GadE nd asnC 3925018 3925047 nd nd 26258987
  HTRI00000180 TF CHIP-SV, MSI-GadE-26258987 GadE nd dcuC 655216 655243 nd nd 26258987
  HTRI00000180 TF CHIP-SV, MSI-GadE-26258987 GadE induce gadBC 1570144 1570175 nd nd 26258987
  HTRI00000180 TF CHIP-SV, MSI-GadE-26258987 GadE nd micF 2311024 2311054 nd nd 26258987
  HTRI00000180 TF CHIP-SV, MSI-GadE-26258987 GadE nd yfjU 2769762 2769784 nd nd 26258987
  HTRI00000180 TF CHIP-SV, MSI-GadE-26258987 GadE nd gltBD 3352240 3352258 nd nd 26258987
  HTRI00000180 TF CHIP-SV, MSI-GadE-26258987 GadE induce yjbQR 4267976 4268006 nd nd 26258987
  HTRI00000180 TF CHIP-SV, MSI-GadE-26258987 GadE induce yjjU 4610316 4610345 nd nd 26258987


RegulonDB