RegulonDB RegulonDB 10.0: Downloadable High-throughput datasets

Downloadable High-throughput datasets


Our curation is focused on identifying the objects (sites, promoters, interactions) that satisfy a set of criteria regarding confidence and interpretability, in order to upload them in RegulonDB together with all existing knowledge. When these criteria are not satisfied, then we simply offer the data as datasets. This page contains the catalog of the HT datasets.




  ID Type Name|Title TF Effect Regulated Object TFBS left position TFBS right position DNA sequence Method Reference
  HTRI00000214 TF CHIP-SV, MSI-SoxR-26279566 SoxR induce aroF-tyrA 2739197 2739232 nd nd 26279566
  HTRI00000214 TF CHIP-SV, MSI-SoxR-26279566 SoxR nd yhcC 3352069 3352101 nd nd 26279566
  HTRI00000214 TF CHIP-SV, MSI-SoxR-26279566 SoxR induce yjcB 4273175 4273207 nd nd 26279566
  HTRI00000214 TF CHIP-SV, MSI-SoxR-26279566 SoxR nd soxR 4275454 4275486 nd nd 26279566
  HTRI00000214 TF CHIP-SV, MSI-SoxR-26279566 SoxR induce mgtA 4465571 4465603 nd nd 26279566
  HTRI00000214 TF CHIP-SV, MSI-SoxR-26279566 SoxR induce lpxC 106518 106550 nd nd 26279566
  HTRI00000214 TF CHIP-SV, MSI-SoxR-26279566 SoxR induce sodA 4098775 4098807 nd nd 26279566
  HTRI00000214 TF CHIP-SV, MSI-SoxR-26279566 SoxR induce yrbL 3346463 3346495 nd nd 26279566
  HTRI00000214 TF CHIP-SV, MSI-SoxR-26279566 SoxR induce soxS 4275424 4275456 nd nd 26279566
  HTRI00000214 TF CHIP-SV, MSI-SoxR-26279566 SoxR nd ahpF 638922 638954 nd nd 26279566


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