RegulonDB RegulonDB 10.0: Downloadable High-throughput datasets

Downloadable High-throughput datasets


Our curation is focused on identifying the objects (sites, promoters, interactions) that satisfy a set of criteria regarding confidence and interpretability, in order to upload them in RegulonDB together with all existing knowledge. When these criteria are not satisfied, then we simply offer the data as datasets. This page contains the catalog of the HT datasets.




  ID Type Name|Title TSS left position TSS right position TSS Max Freq TSS length TSS Number Reads Orientation GeneName Relative orientation to gene Reference
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 446941 447270 nd nd nd reverse cyoD -212 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 446039 446929 nd nd nd reverse cyoE 44 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2871409 2872014 nd nd nd reverse cysC -237 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2888121 2889920 nd nd nd reverse cysJ -65 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2530431 2531402 nd nd nd forward cysK -31 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 879950 881152 nd nd nd forward dacC -92 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3680184 3681470 nd nd nd reverse dctA 539 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 653806 655191 nd nd nd reverse dcuC -38 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3380222 3381289 nd nd nd forward degS -27 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1662530 1663144 nd nd nd forward dmsD -367 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 193521 194717 nd nd nd forward dxr 864 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4373722 4374288 nd nd nd forward efp -43 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3851945 3853129 nd nd nd forward emrD -586 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3914016 3915398 nd nd nd reverse atpD 158 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3918973 3919212 nd nd nd reverse atpE -25 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3918441 3918911 nd nd nd reverse atpF 330 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3917893 3918426 nd nd nd reverse atpH -329 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3737728 3738981 nd nd nd forward avtA -31 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3687178 3688284 nd nd nd reverse bcsZ 510 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 809604 810758 nd nd nd forward bioF 173 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 809604 810758 nd nd nd forward bioF -262 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 175107 176528 nd nd nd forward clcA -96 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 922487 924763 nd nd nd forward clpA 1765 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1305209 1306669 nd nd nd reverse cls 638 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4432645 4434588 nd nd nd reverse cpdB -64 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2922178 2922537 nd nd nd reverse csrB 217 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1309113 1309832 nd nd nd forward tonB -32 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1733402 1733983 nd nd nd forward sodB -53 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1140405 1143590 nd nd nd reverse rne -510 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1277180 1278571 nd nd nd forward narK -25 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 864352 865587 nd nd nd reverse moeA -30 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4126695 4127855 nd nd nd forward metB -37 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3560036 3561541 nd nd nd forward glpD -42 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3070694 3071713 nd nd nd reverse epd -132 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 405629 406153 nd nd nd forward aroL -127 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 185123 185947 nd nd nd reverse dapD -29 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4215132 4216436 nd nd nd forward aceA -275 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 125695 127587 nd nd nd forward aceF -370 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4216619 4218355 nd nd nd forward aceK -248 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1150838 1151074 nd nd nd forward acpP -257 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1150838 1151074 nd nd nd forward acpP -411 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1486256 1487695 nd nd nd forward aldA -22 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2004180 2005667 nd nd nd forward amyA -24 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 405629 406153 nd nd nd forward aroL -53 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3916339 3917880 nd nd nd reverse atpA 289 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3919259 3920074 nd nd nd reverse atpB -128 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3473740 3474462 nd nd nd reverse yheO -67 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2798156 2798497 nd nd nd forward ygaM -13 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 667942 668259 nd nd nd reverse ybeB -36 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4108763 4109530 nd nd nd reverse tpiA -62 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 473525 474385 nd nd nd reverse tesB -40 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 8238 9191 nd nd nd forward talB -45 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 986808 988208 nd nd nd reverse asnS -53 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3808366 3809175 nd nd nd reverse mutM -23 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1804394 1805323 nd nd nd forward pfkB -18 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4178019 4178516 nd nd nd forward rplJ -373 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 254259 255716 nd nd nd reverse pepD -91 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3370705 3371598 nd nd nd reverse nanA -37 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 816267 817256 nd nd nd forward moaA -131 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4368711 4369004 nd nd nd forward groS -72 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 710158 710688 nd nd nd reverse fldA -56 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 950495 952777 nd nd nd reverse pflB -368 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2237372 2238370 nd nd nd reverse mglB 881 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 232597 233955 nd nd nd reverse mltD -26 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 817278 817790 nd nd nd forward moaB -40 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 818271 818516 nd nd nd forward moaD 20 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1974276 1975163 nd nd nd reverse motA -66 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 94650 96008 nd nd nd forward murF -203 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4163451 4164308 nd nd nd forward murI 178 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 703167 705113 nd nd nd forward nagE 112 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1177816 1178727 nd nd nd forward nagK -167 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3614205 3615038 nd nd nd forward nikC -54 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2345406 2346536 nd nd nd forward nrdB -32 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4404213 4404638 nd nd nd forward nsrR -535 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1709547 1710182 nd nd nd forward nth -430 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2094638 2095249 nd nd nd forward hisI -385 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 200482 200967 nd nd nd forward hlpA -494 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 200482 200967 nd nd nd forward hlpA -105 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4481860 4482303 nd nd nd reverse holC -200 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 141431 141967 nd nd nd forward hpt -70 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4119780 4120310 nd nd nd reverse hslV -61 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 225381 225457 nd nd nd forward ileV -14 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2346844 2347494 nd nd nd reverse inaA -115 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 273325 274341 nd nd nd reverse insH-1 983 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2638708 2639826 nd nd nd reverse ispG -119 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 240343 240816 nd nd nd forward ivy -9 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 80867 81958 nd nd nd reverse leuB -77 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 79464 80864 nd nd nd reverse leuC -478 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2347957 2349033 nd nd nd reverse glpQ -558 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2349038 2350396 nd nd nd reverse glpT -77 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4112592 4113602 nd nd nd reverse glpX -24 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4112592 4113602 nd nd nd reverse glpX -64 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4112592 4113602 nd nd nd reverse glpX -317 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 752408 753691 nd nd nd reverse gltA -440 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3357220 3358638 nd nd nd forward gltD -59 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2123767 2124246 nd nd nd reverse gmm -339 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3783283 3784827 nd nd nd forward gpmM 873 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2812905 2814461 nd nd nd reverse gshA -145 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2812905 2814461 nd nd nd reverse gshA -314 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3875728 3878142 nd nd nd reverse gyrB -32 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 387977 388951 nd nd nd reverse hemB -27 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1193050 1193511 nd nd nd reverse nudJ -262 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2402651 2403094 nd nd nd reverse nuoA 23 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2400077 2401867 nd nd nd reverse nuoC -296 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2399574 2400074 nd nd nd reverse nuoE 353 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3103736 3104992 nd nd nd forward nupG 522 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1018236 1019276 nd nd nd reverse ompA 105 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1018236 1019276 nd nd nd reverse ompA -86 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1312044 1312682 nd nd nd forward ompW -28 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1299206 1300837 nd nd nd forward oppA -512 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1299206 1300837 nd nd nd forward oppA 884 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 148807 149601 nd nd nd reverse panB -29 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4029184 4030515 nd nd nd forward pepQ -14 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4455982 4457334 nd nd nd forward pmbA -82 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 63429 65780 nd nd nd reverse polB -23 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1183681 1184817 nd nd nd reverse potA -66 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1181006 1182052 nd nd nd reverse potD 238 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 461139 463010 nd nd nd forward ppiD -62 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3407092 3407973 nd nd nd forward prmA -87 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 260727 261980 nd nd nd forward proA -384 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 259612 260715 nd nd nd forward proB -479 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2720749 2722104 nd nd nd forward pssA -58 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2412769 2414913 nd nd nd forward pta -601 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 191855 192580 nd nd nd forward pyrH 589 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2735176 2735517 nd nd nd forward raiA -30 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3934301 3935191 nd nd nd forward rbsB -308 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3933311 3934276 nd nd nd forward rbsC 404 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 219591 219995 nd nd nd reverse rcsF -39 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3823233 3825314 nd nd nd forward recG -27 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 433871 434341 nd nd nd forward ribE -15 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 433871 434341 nd nd nd forward ribE -37 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1193521 1194174 nd nd nd reverse rluE 402 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3268238 3268614 nd nd nd reverse rnpB 250 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 862865 863527 nd nd nd forward fsaA 68 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 932447 936436 nd nd nd forward ftsK -89 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 103155 103985 nd nd nd forward ftsQ -18 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3469422 3471536 nd nd nd reverse fusA -310 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1568669 1570069 nd nd nd reverse gadB 414 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3269889 3270779 nd nd nd reverse garR -204 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3047182 3047571 nd nd nd reverse gcvH -214 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3583104 3584846 nd nd nd reverse ggt -30 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2352287 2353546 nd nd nd forward glpB -219 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4255138 4255746 nd nd nd forward lexA -28 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 127912 129336 nd nd nd forward lpd -50 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4351223 4352740 nd nd nd reverse lysU -85 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4244807 4245922 nd nd nd forward malK 1129 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3548102 3550495 nd nd nd reverse malP 706 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1901910 1902770 nd nd nd forward manZ 98 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2373022 2373984 nd nd nd reverse menC -83 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2371670 2373025 nd nd nd reverse menE -111 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4130639 4131529 nd nd nd forward metF -448 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 613380 617261 nd nd nd forward entF 17 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 628523 628936 nd nd nd forward entH -131 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1924144 1924806 nd nd nd forward exoX -16 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1147982 1148935 nd nd nd forward fabH -272 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4426958 4427578 nd nd nd forward fklB -27 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3848159 3848749 nd nd nd reverse uhpA -24 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3848159 3848749 nd nd nd reverse uhpA -18 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2618268 2618894 nd nd nd reverse upp -33 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1990898 1992730 nd nd nd reverse uvrC 313 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4479005 4481860 nd nd nd reverse valS 526 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 779988 780063 nd nd nd forward valT -5 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1744459 1744535 nd nd nd forward valV -18 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3926175 3927626 nd nd nd reverse viaA 788 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2928987 2929832 nd nd nd forward ygdG 69 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 287628 288386 nd nd nd reverse yagI -28 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 490106 490483 nd nd nd forward ybaN -23 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 474603 475175 nd nd nd forward ybaY -73 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 742816 743472 nd nd nd forward ybgJ -49 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 784160 784540 nd nd nd reverse ybgS -145 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 814962 815870 nd nd nd reverse ybhK -20 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 854047 854967 nd nd nd reverse ybiS -44 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1051512 1052585 nd nd nd reverse yccM -33 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3039335 3040315 nd nd nd forward ygfZ -31 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3079935 3080693 nd nd nd forward yggG -67 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3145919 3146959 nd nd nd forward yghZ -35 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3251340 3252236 nd nd nd reverse yhaJ -19 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3251340 3252236 nd nd nd reverse yhaJ -28 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3254701 3255969 nd nd nd reverse yhaO -159 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3345137 3345991 nd nd nd forward yhbJ -103 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3479311 3481224 nd nd nd forward yheS -71 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3603774 3604400 nd nd nd forward yhhN 23 19838305
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  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3638885 3640354 nd nd nd forward dtpB 729 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3671385 3672398 nd nd nd forward yhjD 844 19838305
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  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3674313 3676388 nd nd nd reverse yhjG -12 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3694020 3694208 nd nd nd reverse yhjR -39 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3714570 3715229 nd nd nd forward yiaD -333 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2801 3733 nd nd nd forward thrB 678 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 454357 455655 nd nd nd forward tig -35 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3077666 3079657 nd nd nd reverse tktA 1565 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 776963 778255 nd nd nd forward tolB -40 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 776963 778255 nd nd nd forward tolB -27 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1843023 1844984 nd nd nd reverse topB -201 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1843023 1844984 nd nd nd reverse topB -13 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4461077 4462732 nd nd nd reverse treC 953 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 430353 431237 nd nd nd reverse tsx -77 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3468167 3469351 nd nd nd reverse tufA 429 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4173967 4175151 nd nd nd forward tufB 100 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4056430 4058253 nd nd nd forward typA 643 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1713972 1715246 nd nd nd reverse tyrS -309 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 694324 695499 nd nd nd forward ubiF -24 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2096471 2097637 nd nd nd reverse ugd -352 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2096471 2097637 nd nd nd reverse ugd -145 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1844989 1846032 nd nd nd reverse selD -22 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 77621 78799 nd nd nd forward setA -111 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3475929 3476519 nd nd nd reverse slyD -61 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3430458 3431582 nd nd nd reverse smf -290 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4098833 4099453 nd nd nd forward sodA -51 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1846861 1848717 nd nd nd forward sppA -496 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2753615 2753977 nd nd nd forward ssrA 316 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2753615 2753977 nd nd nd forward ssrA -5 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3054005 3054187 nd nd nd forward ssrS -26 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3054005 3054187 nd nd nd forward ssrS 0 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 757929 760730 nd nd nd forward sucA 2815 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 760745 761962 nd nd nd forward sucB 329 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 760745 761962 nd nd nd forward sucB 327 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1759790 1760536 nd nd nd reverse sufC 1 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2867535 2868296 nd nd nd reverse surE -345 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4019968 4020237 nd nd nd forward tatA -35 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2228646 2229044 nd nd nd forward yohJ -21 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2591094 2591792 nd nd nd reverse ypfH -19 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2745909 2746775 nd nd nd forward ypjD 44 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3146999 3147493 nd nd nd reverse yqhA -25 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3248099 3248398 nd nd nd forward yqjK -143 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3291422 3293458 nd nd nd forward yraM -130 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4437895 4439238 nd nd nd reverse ytfL 420 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3180572 3181345 nd nd nd forward zupT -6 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 4257511 4258026 nd nd nd reverse zur -28 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1255944 1257035 nd nd nd reverse ychF -70 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3638134 3638568 nd nd nd forward uspA -113 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 784856 785908 nd nd nd forward aroG -42 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 2017642 2018106 nd nd nd forward fliL -34 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 3510656 3511660 nd nd nd reverse trpS -59 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 950495 952777 nd nd nd reverse pflB -25 19838305
  HTRI00000229 TSS RNA-seq-Promoter_from_454_Dataset-25266388 1146017 1146538 nd nd nd forward yceD