RegulonDB RegulonDB 10.0: Downloadable High-throughput datasets

Downloadable High-throughput datasets


Our curation is focused on identifying the objects (sites, promoters, interactions) that satisfy a set of criteria regarding confidence and interpretability, in order to upload them in RegulonDB together with all existing knowledge. When these criteria are not satisfied, then we simply offer the data as datasets. This page contains the catalog of the HT datasets.




  ID Type Name|Title TSS left position TSS right position TSS Max Freq TSS length TSS Number Reads Orientation GeneName Relative orientation to gene Reference
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 131615 134212 nd nd nd forward acnB -96 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1739437 1740585 nd nd nd forward cfa -33 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 770681 772249 nd nd nd forward cydA -174 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3143165 3144283 nd nd nd reverse hybO -102 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4455982 4457334 nd nd nd forward pmbA -14 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1924803 1926863 nd nd nd reverse ptrB -26 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1935673 1937115 nd nd nd forward pykA -104 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1753722 1755134 nd nd nd forward pykF -78 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2906051 2907688 nd nd nd reverse pyrG -47 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4261271 4262254 nd nd nd reverse qor -73 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2078813 2079286 nd nd nd reverse sbmC -45 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1713972 1715246 nd nd nd reverse tyrS -64 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1395696 1396646 nd nd nd reverse uspE -39 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1066335 1066931 nd nd nd reverse wrbA -50 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 71351 72115 nd nd nd forward yabI -81 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 142008 142670 nd nd nd reverse can -33 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 194903 195664 nd nd nd forward ispU -119 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 239419 240189 nd nd nd reverse yafV -27 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3638134 3638568 nd nd nd forward uspA -128 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 903175 903690 nd nd nd reverse ybjP -55 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4103843 4104343 nd nd nd forward cpxP -35 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2816983 2817168 nd nd nd reverse csrA -130 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3378765 3380132 nd nd nd forward degQ -90 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4254660 4255028 nd nd nd forward dgkA -31 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2904665 2905963 nd nd nd reverse eno -78 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1348275 1349063 nd nd nd reverse fabI -82 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2744456 2745817 nd nd nd reverse ffh -58 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2111458 2112351 nd nd nd reverse galF -24 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2192322 2194355 nd nd nd forward metG -31 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 970975 971868 nd nd nd forward ycbJ -38 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1226904 1227230 nd nd nd forward ycgL -72 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1287897 1288355 nd nd nd reverse ychJ -46 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1626376 1627062 nd nd nd forward ydfH -26 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1671937 1672971 nd nd nd forward tqsA -23 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2458672 2458956 nd nd nd reverse yfcZ -45 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2798156 2798497 nd nd nd forward ygaM -15 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1333855 1336530 nd nd nd forward acnA -5 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1521331 1522392 nd nd nd forward yncE -83 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1695297 1696064 nd nd nd reverse hdhA -83 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1755445 1755681 nd nd nd forward lpp -38 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1996518 1997504 nd nd nd reverse dcyD -28 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2173081 2174343 nd nd nd reverse gatZ -111 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2232055 2233293 nd nd nd forward yeiT -47 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2268001 2268567 nd nd nd forward spr -59 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2660605 2661345 nd nd nd reverse trmJ 53 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2807639 2808376 nd nd nd forward ygaZ 72 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2911721 2913022 nd nd nd reverse rlmD -44 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3077666 3079657 nd nd nd reverse tktA 92 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3440137 3440493 nd nd nd reverse rpsM -24 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3643408 3644250 nd nd nd forward yhiR -35 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3992785 3993609 nd nd nd forward dapF 117 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4039438 4040022 nd nd nd reverse mobA 43 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4159090 4159794 nd nd nd forward fabR -45 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4375212 4375745 nd nd nd reverse blc -25 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4380666 4381643 nd nd nd forward poxA -25 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1017708 1018160 nd nd nd forward matP -26 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 142008 142670 nd nd nd reverse can -33 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3490590 3491771 nd nd nd forward tsgA -49 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1359144 1359908 nd nd nd forward puuD -68 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3473740 3474462 nd nd nd reverse yheO -66 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2067839 2068249 nd nd nd reverse insC-3 17 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3716357 3717067 nd nd nd reverse yiaF -53 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4370832 4371185 nd nd nd forward yjeI -48 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 875933 877258 nd nd nd reverse rimO -35 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1806721 1807257 nd nd nd reverse yniB -31 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3214801 3215424 nd nd nd forward yqjI -27 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 131615 134212 nd nd nd forward acnB 47 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 345708 345983 nd nd nd forward yahO -52 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 480478 483627 nd nd nd reverse acrB -282 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1078528 1080036 nd nd nd forward putP -17 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1157092 1158525 nd nd nd forward ptsG -102 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4231781 4233430 nd nd nd forward pgi -36 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 908554 910272 nd nd nd reverse poxB -27 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 20815 21078 nd nd nd reverse rpsT -132 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2069563 2072682 nd nd nd forward flu -68 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 394354 395511 nd nd nd reverse ampH -32 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1946774 1948546 nd nd nd reverse aspS -94 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3607978 3608535 nd nd nd forward dcrB -38 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1840395 1841738 nd nd nd forward gdhA -12 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3134685 3136544 nd nd nd reverse gsp -39 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3655018 3655590 nd nd nd forward hdeD 16 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1976964 1977239 nd nd nd reverse insA-5 -16 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3929339 3931207 nd nd nd forward kup -57 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 658474 659439 nd nd nd reverse lipA -85 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 907516 908517 nd nd nd reverse ltaE -26 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 657254 657481 nd nd nd forward ybeH -68 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 903175 903690 nd nd nd reverse ybjP -31 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 903816 904139 nd nd nd forward ybjQ -77 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 980270 982117 nd nd nd forward ycbB -117 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1017708 1018160 nd nd nd forward matP -26 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1116030 1117082 nd nd nd forward yceA 121 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1119924 1120178 nd nd nd reverse bssS -67 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1625541 1626287 nd nd nd forward ydfG -26 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2858489 2859286 nd nd nd reverse ygbI 9 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3002030 3003808 nd nd nd reverse ygeV -62 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3039335 3040315 nd nd nd forward ygfZ -33 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3066195 3066830 nd nd nd reverse argO -28 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3473740 3474462 nd nd nd reverse yheO -102 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3759370 3759978 nd nd nd reverse yibF -25 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 879077 879703 nd nd nd reverse yliJ -39 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1392915 1393946 nd nd nd reverse ynaI -51 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1653832 1654173 nd nd nd forward ynfB -99 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 134388 134750 nd nd nd forward yacL -49 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 628523 628936 nd nd nd forward entH -8 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1025780 1026238 nd nd nd reverse mgsA -27 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3066969 3067829 nd nd nd reverse mscS -64 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4268261 4268677 nd nd nd forward yjbQ -24 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4360756 4361331 nd nd nd reverse yjdC -23 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4423141 4423536 nd nd nd forward rpsF -93 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4476496 4476912 nd nd nd forward rraB -29 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2067839 2068249 nd nd nd reverse insC-3 17 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1671937 1672971 nd nd nd forward tqsA -23 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1712401 1713006 nd nd nd forward gst -59 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1753722 1755134 nd nd nd forward pykF -38 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1776414 1777325 nd nd nd reverse ydiP -32 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1837491 1838798 nd nd nd forward ynjE -27 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1864932 1866866 nd nd nd forward yeaG -143 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2176843 2178120 nd nd nd forward yegT -40 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2309668 2310771 nd nd nd reverse ompC -62 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4080795 4083845 nd nd nd reverse fdoG 131 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4105575 4106537 nd nd nd forward pfkA -33 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4345427 4346767 nd nd nd reverse dcuB -19 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1568669 1570069 nd nd nd reverse gadB -28 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 458112 460466 nd nd nd forward lon -76 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4283436 4285394 nd nd nd reverse acs -19 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 960424 961107 nd nd nd forward cmk -38 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2428297 2428785 nd nd nd reverse cvpA -36 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2349038 2350396 nd nd nd reverse glpT -77 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4453808 4455181 nd nd nd forward mpl -25 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 400610 400870 nd nd nd forward iraP -24 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 823853 824263 nd nd nd forward ybhQ -29 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1234932 1236464 nd nd nd reverse ycgB -45 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1212551 1213282 nd nd nd reverse ycgE -54 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1210903 1211226 nd nd nd reverse iraM -87 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1258014 1258292 nd nd nd forward ychH -53 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1333855 1336530 nd nd nd forward acnA -51 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1321244 1322125 nd nd nd forward trpH -32 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1620984 1621874 nd nd nd reverse ydeH -27 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1687876 1689384 nd nd nd forward ydgA -58 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1872376 1872822 nd nd nd forward yeaL -29 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2360453 2361655 nd nd nd reverse yfaY -22 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2614116 2615579 nd nd nd forward yfgC -68 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2636685 2637305 nd nd nd reverse yfgM -90 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3490590 3491771 nd nd nd forward tsgA -49 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3858276 3859199 nd nd nd forward yidL -2 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3927620 3929116 nd nd nd reverse ravA -38 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4040092 4040361 nd nd nd forward yihD -21 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4225754 4227385 nd nd nd forward yjbB -130 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4380666 4381643 nd nd nd forward poxA -25 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4468550 4468936 nd nd nd reverse yjgF -33 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 164730 167264 nd nd nd forward mrcB -9 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 308582 309250 nd nd nd reverse matC -68 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 539789 541090 nd nd nd forward ybbY -206 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 602639 603886 nd nd nd reverse ybdG -23 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 865791 866756 nd nd nd forward iaaA -31 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 917351 918307 nd nd nd reverse ybjX 18 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 657254 657481 nd nd nd forward ybeH -68 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2534408 2535259 nd nd nd reverse pdxK -86 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 404059 404868 nd nd nd reverse proC -42 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1722158 1722679 nd nd nd reverse sodC -24 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3237966 3239210 nd nd nd forward sstT -83 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 930308 931273 nd nd nd reverse trxB -28 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2462274 2463029 nd nd nd reverse mlaA -128 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 182463 183620 nd nd nd forward cdaR -17 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1717900 1718367 nd nd nd forward slyB -99 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 742050 742793 nd nd nd forward ybgI -29 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4263805 4264884 nd nd nd forward alr -130 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3154645 3155472 nd nd nd forward dkgA -54 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4262337 4263752 nd nd nd forward dnaB -31 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 222833 223408 nd nd nd forward gmhB -27 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2923370 2924218 nd nd nd forward queF -30 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1635633 1635806 nd nd nd reverse gnsB -64 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1119924 1120178 nd nd nd reverse bssS -67 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2462274 2463029 nd nd nd reverse mlaA -128 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1118691 1119809 nd nd nd reverse solA -23 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1140405 1143590 nd nd nd reverse rne 44 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1185067 1186293 nd nd nd forward pepT -21 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1234161 1234880 nd nd nd forward fadR -26 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1308593 1308889 nd nd nd reverse yciI -27 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1348275 1349063 nd nd nd reverse fabI 161 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1386954 1387919 nd nd nd forward ycjG -56 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2182535 2183323 nd nd nd reverse thiM -151 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2506483 2507448 nd nd nd reverse glk -21 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2526183 2528198 nd nd nd reverse ligA -25 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2576688 2577638 nd nd nd forward talA -61 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3451951 3453420 nd nd nd reverse gspA 65 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3828480 3830189 nd nd nd forward yicH -28 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4073576 4074175 nd nd nd forward yihX -5 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3924035 3924478 nd nd nd reverse mioC -21 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1863750 1864496 nd nd nd reverse mipA -34 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3520893 3523445 nd nd nd forward mrcA -45 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3436046 3436456 nd nd nd forward mscL -25 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 849673 850188 nd nd nd forward ompX -33 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2534408 2535259 nd nd nd reverse pdxK -41 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4029184 4030515 nd nd nd forward pepQ -14 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3957555 3957836 nd nd nd reverse ppiC -28 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3482512 3483381 nd nd nd forward prkB -180 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 643420 644226 nd nd nd reverse rna -31 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1140405 1143590 nd nd nd reverse rne -54 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4125036 4125248 nd nd nd forward rpmE -105 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 938651 939943 nd nd nd forward serS -64 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 454357 455655 nd nd nd forward tig -42 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4108763 4109530 nd nd nd reverse tpiA -62 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2541854 2542645 nd nd nd reverse ucpA -41 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1433209 1433643 nd nd nd reverse uspF -22 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 640662 641090 nd nd nd reverse uspG -36 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2530431 2531402 nd nd nd forward cysK -32 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3560036 3561541 nd nd nd forward glpD -42 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3492033 3494576 nd nd nd forward nirB -24 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4105575 4106537 nd nd nd forward pfkA -78 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2743959 2744207 nd nd nd reverse rpsP -69 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3886458 3886532 nd nd nd forward tnaC -24 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3348711 3351047 nd nd nd reverse arcB -24 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3737728 3738981 nd nd nd forward avtA -33 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3810754 3811974 nd nd nd forward dfp -30 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3219488 3220471 nd nd nd forward ebgR -29 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 556098 556964 nd nd nd reverse folD -40 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1860795 1861790 nd nd nd forward gapA -36 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3143165 3144283 nd nd nd reverse hybO -26 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3929339 3931207 nd nd nd forward kup -213 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 106557 107474 nd nd nd forward lpxC -29 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3235315 3236319 nd nd nd forward ygjR -29 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3298774 3299298 nd nd nd reverse yhbT -92 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 3378213 3378611 nd nd nd forward yhcB -9 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4002253 4002720 nd nd nd reverse yigI -30 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1905472 1905615 nd nd nd reverse yobF -26 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2923370 2924218 nd nd nd forward queF -30 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 194903 195664 nd nd nd forward ispU -2 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 257829 258230 nd nd nd forward crl -17 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 418815 420134 nd nd nd forward brnQ -103 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 500786 502462 nd nd nd reverse ybaL -58 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 667942 668259 nd nd nd reverse ybeB -36 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 954095 955855 nd nd nd reverse ycaO 167 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 1508027 1509433 nd nd nd forward ydcR -25 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2636685 2637305 nd nd nd reverse yfgM -119 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 2636685 2637305 nd nd nd reverse yfgM -150 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4243252 4244442 nd nd nd reverse malE -45 19838305
  HTRI00000230 TSS RNA-seq-Promoter_from_RACE_Dataset-25266388 4369048 4370694 nd nd nd forward