RegulonDB RegulonDB 10.0: Downloadable High-throughput datasets

Downloadable High-throughput datasets


Our curation is focused on identifying the objects (sites, promoters, interactions) that satisfy a set of criteria regarding confidence and interpretability, in order to upload them in RegulonDB together with all existing knowledge. When these criteria are not satisfied, then we simply offer the data as datasets. This page contains the catalog of the HT datasets.




  ID Type Name|Title TF Effect Regulated Object TFBS left position TFBS right position DNA sequence Method Reference
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd malT nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd nrdA nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd ompC nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd ompX nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd psiF nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd slyA nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd sstT nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd ybcW nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd ydhI nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd yeaN nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd ileY nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd malE nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd chaB nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd csgD nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd dtpA nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd znuA nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd dtpD nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd fadE nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd fecI nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd tatE nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd ybcV nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd ybgI nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd yccT nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd yeaM nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd greB nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd hdhA nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd holE nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd malK nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd mcbA nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd micF nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd narU nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd ompF nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd ompR nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd ptsG nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd relA nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd yfaL nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd yfcV nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd ygbJ nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd yhjE nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd ykgO nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd chaA nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd cstA nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd dhaK nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd dhaR nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd yqjA nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd yobB nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd znuC nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd alx nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd betI nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd betT nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd chiP nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd csiD nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd fiu nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd galR nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd omrB nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd rhtA nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd rseX nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd yagU nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd yccU nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd essD nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd flhD nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd galP nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd malP nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd rplV nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd rpsS nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd ycgZ nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd ygbI nd nd nd nd 28061857
  HTRI00000337 TF MEME Suite 4.10.1-OmpR-28061857 OmpR nd ykgM nd nd nd nd 28061857


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