RegulonDB RegulonDB 10.0: Downloadable High-throughput datasets

Downloadable High-throughput datasets


Our curation is focused on identifying the objects (sites, promoters, interactions) that satisfy a set of criteria regarding confidence and interpretability, in order to upload them in RegulonDB together with all existing knowledge. When these criteria are not satisfied, then we simply offer the data as datasets. This page contains the catalog of the HT datasets.




  ID Type Name|Title TF Effect Regulated Object TFBS left position TFBS right position DNA sequence Method Reference
  HTRI00000340 TF CHIP-PurR-21572102 PurR repress purA 4 402 483 4 402 483 nd nd 21572102
  HTRI00000340 TF CHIP-PurR-21572102 PurR nd yohP 2 226 706 2 227 311 nd nd 21572102
  HTRI00000340 TF CHIP-PurR-21572102 PurR nd pyrL-pyrB-pyrI 4 470 473 4 470 609 nd nd 21572102
  HTRI00000340 TF CHIP-PurR-21572102 PurR nd yhdE 3 396 153 3 396 727 nd nd 21572102
  HTRI00000340 TF CHIP-PurR-21572102 PurR nd ppiA/tsgA 3 490 230 3 490 492 nd nd 21572102
  HTRI00000340 TF CHIP-PurR-21572102 PurR nd ydiJ/ydiK 1 766 545 1 767 225 nd nd 21572102
  HTRI00000340 TF CHIP-PurR-21572102 PurR nd mdtL 3 889 003 3 889 940 nd nd 21572102


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