RegulonDB RegulonDB 10.0: Downloadable High-throughput datasets

Downloadable High-throughput datasets


Our curation is focused on identifying the objects (sites, promoters, interactions) that satisfy a set of criteria regarding confidence and interpretability, in order to upload them in RegulonDB together with all existing knowledge. When these criteria are not satisfied, then we simply offer the data as datasets. This page contains the catalog of the HT datasets.




  ID Type Name|Title TF Effect Regulated Object TFBS left position TFBS right position DNA sequence Method Reference
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR nd sdaC-sdaB 2 925 514 2 926 070 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR nd Tsx 430 925 431 911 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR repress purL 2 693 490 2 693 714 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR repress pyrD 1 003 618 1 004 017 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR nd yfgO/yfgC 2 613 728 2 614 177 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR nd yhhQ 3 607 049 3 607 298 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR nd fhuC-fhuD-fhuB 169 607 170 394 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR nd gadX 3 663 018 3 663 884 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR repress gcvT-gcvH-gcvP 3 048 883 3 049 539 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR repress guaB-guaA 2 632 091 2 632 533 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR nd malT 3 550 769 3 551 100 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR repress purB 1 190 891 1 191 196 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR repress purE-purK 552 127 552 626 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR repress purH-purD 4 205 612 4 470 784 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR nd ygfK-ssnA 3 013 592 3 014 047 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR nd ygfT-ygfS 3 028 215 3 029 251 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR repress carA-carB 28 951 29 929 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR repress cvpA-purF-ubiX 2 428 603 2 428 965 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR nd fabB-mnmC 2 439 185 2 439 884 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR repress glyA 2 683 277 2 683 995 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR repress purT 1 928 502 1 929 233 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR nd ryjA/yjcD 4 275 855 4 276 485 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR nd yieG 3 894 397 3 895 190 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR repress codB-codA 354 056 354 323 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR repress purC 2 594 676 2 596 862 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR repress purM-purN 2 618 847 2 619 484 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR repress purR 1 735 528 1 736 095 nd nd 21572102
  HTRI00000343 TF CHIP-SV-PurR-21572102 PurR nd xanP 3 826 187 3 827 555 nd nd 21572102


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